RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 CFAP65Q6ZU64 1925 aaKnown RBP24.08■■□□□ 1.44
RAB40C-210ENST00000566290 KANK1Q14678 1352 aa24.07■■□□□ 1.44
RAB40C-210ENST00000566290 LMTK2Q8IWU2 1503 aa24.07■■□□□ 1.44
RAB40C-210ENST00000566290 DIEXFQ68CQ4 756 aaKnown RBP24.07■■□□□ 1.44
RAB40C-210ENST00000566290 ARHGAP31Q2M1Z3 1444 aa24.07■■□□□ 1.44
RAB40C-210ENST00000566290 SYNMO15061 1565 aa24.05■■□□□ 1.44
RAB40C-210ENST00000566290 NEUROD1Q13562 356 aa24.05■■□□□ 1.44
RAB40C-210ENST00000566290 NUP155O75694 1391 aa24.03■■□□□ 1.44
RAB40C-210ENST00000566290 SETD1AO15047 1707 aaKnown RBP24■■□□□ 1.43
RAB40C-210ENST00000566290 EFCAB6Q5THR3 1501 aa24■■□□□ 1.43
RAB40C-210ENST00000566290 XIRP1Q702N8 1843 aaKnown RBP23.98■■□□□ 1.43
RAB40C-210ENST00000566290 FAM135BQ49AJ0 1406 aa23.97■■□□□ 1.43
RAB40C-210ENST00000566290 NOS1P29475 1434 aa23.93■■□□□ 1.42
RAB40C-210ENST00000566290 TET3O43151 1660 aa23.93■■□□□ 1.42
RAB40C-210ENST00000566290 LTKP29376 864 aa23.93■■□□□ 1.42
RAB40C-210ENST00000566290 UBR1Q8IWV7 1749 aa23.92■■□□□ 1.42
RAB40C-210ENST00000566290 PIK3C2BO00750 1634 aa23.9■■□□□ 1.42
RAB40C-210ENST00000566290 IDI1Q13907 227 aa23.89■■□□□ 1.41
RAB40C-210ENST00000566290 E9PCH4 1651 aa23.89■■□□□ 1.41
RAB40C-210ENST00000566290 TXNDC2Q86VQ3 553 aa23.88■■□□□ 1.41
RAB40C-210ENST00000566290 UPF1Q92900 1129 aaKnown RBP eCLIP23.88■■□□□ 1.41
RAB40C-210ENST00000566290 SCAF11Q99590 1463 aaKnown RBP23.87■■□□□ 1.41
RAB40C-210ENST00000566290 L3MBTL2Q969R5 705 aa23.85■■□□□ 1.41
RAB40C-210ENST00000566290 ROBO1Q9Y6N7 1651 aa23.84■■□□□ 1.41
RAB40C-210ENST00000566290 FOXD1Q16676 465 aa23.84■■□□□ 1.41
RAB40C-210ENST00000566290 RBM33Q96EV2 1170 aaKnown RBP23.84■■□□□ 1.41
RAB40C-210ENST00000566290 TMEM94Q12767 1356 aa23.83■■□□□ 1.41
RAB40C-210ENST00000566290 ARHGAP23Q9P227 1491 aa23.81■■□□□ 1.4
RAB40C-210ENST00000566290 TRPM2O94759 1503 aa23.81■■□□□ 1.4
RAB40C-210ENST00000566290 SLIT1O75093 1534 aa23.79■■□□□ 1.4
RAB40C-210ENST00000566290 CCDC144AA2RUR9 1427 aa23.79■■□□□ 1.4
RAB40C-210ENST00000566290 SLC52A1Q9NWF4 448 aa23.78■■□□□ 1.4
RAB40C-210ENST00000566290 RALGAPBQ86X10 1494 aa23.77■■□□□ 1.4
RAB40C-210ENST00000566290 SPHKAPQ2M3C7 1700 aa23.77■■□□□ 1.4
RAB40C-210ENST00000566290 STAG3Q9UJ98 1225 aa23.77■■□□□ 1.4
RAB40C-210ENST00000566290 ADGRB3O60242 1522 aa23.77■■□□□ 1.4
RAB40C-210ENST00000566290 TMEM2Q9UHN6 1383 aa23.77■■□□□ 1.4
RAB40C-210ENST00000566290 EID1Q9Y6B2 187 aa23.76■■□□□ 1.39
RAB40C-210ENST00000566290 KDM5AP29375 1690 aaKnown RBP23.76■■□□□ 1.39
RAB40C-210ENST00000566290 KCNA6P17658 529 aa23.75■■□□□ 1.39
RAB40C-210ENST00000566290 PROSER2Q86WR7 435 aaPredicted RBP23.75■■□□□ 1.39
RAB40C-210ENST00000566290 JCADQ9P266 1359 aa23.74■■□□□ 1.39
RAB40C-210ENST00000566290 LAMC1P11047 1609 aa23.73■■□□□ 1.39
RAB40C-210ENST00000566290 MYO5BQ9ULV0 1848 aa23.73■■□□□ 1.39
RAB40C-210ENST00000566290 SPATA31E1Q6ZUB1 1445 aa23.72■■□□□ 1.39
RAB40C-210ENST00000566290 TMEM131LA2VDJ0 1609 aa23.72■■□□□ 1.39
RAB40C-210ENST00000566290 PHLPP1O60346 1717 aa23.7■■□□□ 1.39
RAB40C-210ENST00000566290 SLC26A8Q96RN1 970 aa23.7■■□□□ 1.38
RAB40C-210ENST00000566290 SLAIN2Q9P270 581 aa23.69■■□□□ 1.38
RAB40C-210ENST00000566290 LRP6O75581 1613 aa23.67■■□□□ 1.38
RAB40C-210ENST00000566290 CHGAP10645 457 aaKnown RBP23.67■■□□□ 1.38
RAB40C-210ENST00000566290 EIF4G2P78344 907 aaKnown RBP eCLIP23.67■■□□□ 1.381e-6■■■■□ 25.9
RAB40C-210ENST00000566290 ZFYVE9O95405 1425 aa23.67■■□□□ 1.38
RAB40C-210ENST00000566290 NBPF8Q3BBV2 869 aa23.66■■□□□ 1.38
RAB40C-210ENST00000566290 ZNF772Q68DY9 489 aaPredicted RBP23.66■■□□□ 1.38
RAB40C-210ENST00000566290 STAC3Q96MF2 364 aa23.66■■□□□ 1.38
RAB40C-210ENST00000566290 TRPM1Q7Z4N2 1603 aa23.64■■□□□ 1.38
RAB40C-210ENST00000566290 MEX3CQ5U5Q3 659 aaKnown RBP23.64■■□□□ 1.37
RAB40C-210ENST00000566290 RIMS2Q9UQ26 1411 aa23.63■■□□□ 1.37
RAB40C-210ENST00000566290 NUTM2DQ5VT03 806 aaPredicted RBP23.62■■□□□ 1.37
RAB40C-210ENST00000566290 SRCAPQ6ZRS2 3230 aa23.62■■□□□ 1.37
RAB40C-210ENST00000566290 MSH6P52701 1360 aa23.62■■□□□ 1.37
RAB40C-210ENST00000566290 CLTCL1P53675 1640 aa23.62■■□□□ 1.37
RAB40C-210ENST00000566290 PRAG1Q86YV5 1406 aa23.61■■□□□ 1.37
RAB40C-210ENST00000566290 RXRBP28702 533 aa23.61■■□□□ 1.37
RAB40C-210ENST00000566290 COL16A1Q07092 1604 aaPredicted RBP23.61■■□□□ 1.37
RAB40C-210ENST00000566290 GPRASP1Q5JY77 1395 aa23.6■■□□□ 1.37
RAB40C-210ENST00000566290 SPATA31A6Q5VVP1 1343 aa23.59■■□□□ 1.37
RAB40C-210ENST00000566290 MIER1Q8N108 512 aa23.59■■□□□ 1.37
RAB40C-210ENST00000566290 HSPA5P11021 654 aaKnown RBP23.58■■□□□ 1.37
RAB40C-210ENST00000566290 NKTRP30414 1462 aaKnown RBP23.56■■□□□ 1.36
RAB40C-210ENST00000566290 NWD1Q149M9 1564 aa23.55■■□□□ 1.36
RAB40C-210ENST00000566290 PLEKHG1Q9ULL1 1385 aa23.54■■□□□ 1.36
RAB40C-210ENST00000566290 KIAA1210Q9ULL0 1709 aa23.54■■□□□ 1.36
RAB40C-210ENST00000566290 BCANQ96GW7 911 aa23.52■■□□□ 1.36
RAB40C-210ENST00000566290 USP47Q96K76 1375 aa23.52■■□□□ 1.36
RAB40C-210ENST00000566290 MYOM2P54296 1465 aa23.51■■□□□ 1.35
RAB40C-210ENST00000566290 IFT172Q9UG01 1749 aa23.51■■□□□ 1.35
RAB40C-210ENST00000566290 KIF1BO60333 1816 aa23.5■■□□□ 1.35
RAB40C-210ENST00000566290 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.5■■□□□ 1.35
RAB40C-210ENST00000566290 HDGFP51858 240 aaKnown RBP23.49■■□□□ 1.35
RAB40C-210ENST00000566290 ZNF326Q5BKZ1 582 aaKnown RBP23.49■■□□□ 1.35
RAB40C-210ENST00000566290 ADAMTS13Q76LX8 1427 aa23.49■■□□□ 1.35
RAB40C-210ENST00000566290 CDK12Q9NYV4 1490 aaPredicted RBP23.49■■□□□ 1.35
RAB40C-210ENST00000566290 NUTM2BA6NNL0 878 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-210ENST00000566290 NUTM2EB1AL46 878 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-210ENST00000566290 NUTM2AQ8IVF1 878 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-210ENST00000566290 CCDC7Q96M83 1385 aa23.48■■□□□ 1.35
RAB40C-210ENST00000566290 NEXMIFQ5QGS0 1516 aa23.47■■□□□ 1.35
RAB40C-210ENST00000566290 WASHC2AQ641Q2 1341 aa23.46■■□□□ 1.35
RAB40C-210ENST00000566290 DCAF11Q8TEB1 546 aa23.46■■□□□ 1.35
RAB40C-210ENST00000566290 SHPRHQ149N8 1683 aa23.45■■□□□ 1.34
RAB40C-210ENST00000566290 AFF2P51816 1311 aa23.45■■□□□ 1.34
RAB40C-210ENST00000566290 NRXN3Q9Y4C0 1643 aa23.44■■□□□ 1.34
RAB40C-210ENST00000566290 CHD2O14647 1828 aaKnown RBP23.43■■□□□ 1.34
RAB40C-210ENST00000566290 DDX10Q13206 875 aaKnown RBP23.43■■□□□ 1.34
RAB40C-210ENST00000566290 TBX22Q9Y458 520 aa23.43■■□□□ 1.34
RAB40C-210ENST00000566290 AHDC1Q5TGY3 1603 aaPredicted RBP23.43■■□□□ 1.34
RAB40C-210ENST00000566290 NRXN1Q9ULB1 1477 aa23.43■■□□□ 1.34
RAB40C-210ENST00000566290 C14orf37Q86TY3 774 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms