RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.83■■□□□ 1.414e-12■□□□□ 11.2
THUMPD1-203ENST00000565248 RGS17Q9UGC6 210 aaPredicted RBP23.83■■□□□ 1.41
THUMPD1-203ENST00000565248 STAG3Q9UJ98 1225 aa23.82■■□□□ 1.4
THUMPD1-203ENST00000565248 XIRP1Q702N8 1843 aaKnown RBP23.82■■□□□ 1.4
THUMPD1-203ENST00000565248 ARHGAP31Q2M1Z3 1444 aa23.81■■□□□ 1.4
THUMPD1-203ENST00000565248 FAM135BQ49AJ0 1406 aa23.81■■□□□ 1.4
THUMPD1-203ENST00000565248 IQGAP3Q86VI3 1631 aa23.79■■□□□ 1.4
THUMPD1-203ENST00000565248 TMEM2Q9UHN6 1383 aa23.77■■□□□ 1.4
THUMPD1-203ENST00000565248 PRDM15P57071 1507 aaPredicted RBP23.75■■□□□ 1.39
THUMPD1-203ENST00000565248 PIK3C2BO00750 1634 aa23.75■■□□□ 1.39
THUMPD1-203ENST00000565248 TMEM94Q12767 1356 aa23.74■■□□□ 1.39
THUMPD1-203ENST00000565248 KCNA6P17658 529 aa23.73■■□□□ 1.39
THUMPD1-203ENST00000565248 PROSER2Q86WR7 435 aaPredicted RBP23.72■■□□□ 1.39
THUMPD1-203ENST00000565248 KDM5AP29375 1690 aaKnown RBP23.72■■□□□ 1.39
THUMPD1-203ENST00000565248 ROBO1Q9Y6N7 1651 aa23.7■■□□□ 1.39
THUMPD1-203ENST00000565248 EFCAB6Q5THR3 1501 aa23.7■■□□□ 1.38
THUMPD1-203ENST00000565248 POTEAQ6S8J7 498 aa23.7■■□□□ 1.38
THUMPD1-203ENST00000565248 ANKRD30BQ9BXX2 1392 aa23.68■■□□□ 1.38
THUMPD1-203ENST00000565248 TIMELESSQ9UNS1 1208 aa23.68■■□□□ 1.38
THUMPD1-203ENST00000565248 NEUROD1Q13562 356 aa23.67■■□□□ 1.38
THUMPD1-203ENST00000565248 IDI1Q13907 227 aa23.66■■□□□ 1.38
THUMPD1-203ENST00000565248 SLC26A8Q96RN1 970 aa23.66■■□□□ 1.38
THUMPD1-203ENST00000565248 TET3O43151 1660 aa23.66■■□□□ 1.38
THUMPD1-203ENST00000565248 LMTK2Q8IWU2 1503 aa23.65■■□□□ 1.38
THUMPD1-203ENST00000565248 BCANQ96GW7 911 aa23.65■■□□□ 1.38
THUMPD1-203ENST00000565248 SIN3AQ96ST3 1273 aa23.65■■□□□ 1.38
THUMPD1-203ENST00000565248 MSH6P52701 1360 aa23.64■■□□□ 1.37
THUMPD1-203ENST00000565248 NKTRP30414 1462 aaKnown RBP23.62■■□□□ 1.37
THUMPD1-203ENST00000565248 RBM33Q96EV2 1170 aaKnown RBP23.62■■□□□ 1.37
THUMPD1-203ENST00000565248 TONSLQ96HA7 1378 aa23.62■■□□□ 1.37
THUMPD1-203ENST00000565248 PHLPP1O60346 1717 aa23.6■■□□□ 1.37
THUMPD1-203ENST00000565248 SLAIN2Q9P270 581 aa23.6■■□□□ 1.37
THUMPD1-203ENST00000565248 JCADQ9P266 1359 aa23.59■■□□□ 1.37
THUMPD1-203ENST00000565248 NWD1Q149M9 1564 aa23.57■■□□□ 1.36
THUMPD1-203ENST00000565248 RPRD2Q5VT52 1461 aaKnown RBP23.57■■□□□ 1.36
THUMPD1-203ENST00000565248 SLC52A1Q9NWF4 448 aa23.57■■□□□ 1.36
THUMPD1-203ENST00000565248 ADGRB3O60242 1522 aa23.57■■□□□ 1.36
THUMPD1-203ENST00000565248 E9PCH4 1651 aa23.56■■□□□ 1.36
THUMPD1-203ENST00000565248 HDGFP51858 240 aaKnown RBP23.55■■□□□ 1.36
THUMPD1-203ENST00000565248 CCDC144AA2RUR9 1427 aa23.55■■□□□ 1.36
THUMPD1-203ENST00000565248 NOS1P29475 1434 aa23.54■■□□□ 1.36
THUMPD1-203ENST00000565248 SETD1AO15047 1707 aaKnown RBP23.52■■□□□ 1.36
THUMPD1-203ENST00000565248 PPP1R15AO75807 674 aaPredicted RBP23.51■■□□□ 1.35
THUMPD1-203ENST00000565248 CHD2O14647 1828 aaKnown RBP23.5■■□□□ 1.35
THUMPD1-203ENST00000565248 MEX3CQ5U5Q3 659 aaKnown RBP23.5■■□□□ 1.35
THUMPD1-203ENST00000565248 TRPM2O94759 1503 aa23.49■■□□□ 1.35
THUMPD1-203ENST00000565248 SPHKAPQ2M3C7 1700 aa23.49■■□□□ 1.35
THUMPD1-203ENST00000565248 C14orf37Q86TY3 774 aa23.48■■□□□ 1.35
THUMPD1-203ENST00000565248 SPATA31A6Q5VVP1 1343 aa23.48■■□□□ 1.35
THUMPD1-203ENST00000565248 PLEKHG1Q9ULL1 1385 aa23.48■■□□□ 1.35
THUMPD1-203ENST00000565248 ZNF772Q68DY9 489 aaPredicted RBP23.47■■□□□ 1.35
THUMPD1-203ENST00000565248 NCOA3Q9Y6Q9 1424 aa23.47■■□□□ 1.35
THUMPD1-203ENST00000565248 COL16A1Q07092 1604 aaPredicted RBP23.44■■□□□ 1.34
THUMPD1-203ENST00000565248 TBX22Q9Y458 520 aa23.44■■□□□ 1.34
THUMPD1-203ENST00000565248 ZFYVE9O95405 1425 aa23.43■■□□□ 1.34
THUMPD1-203ENST00000565248 RIMS2Q9UQ26 1411 aa23.43■■□□□ 1.34
THUMPD1-203ENST00000565248 MYO5BQ9ULV0 1848 aa23.43■■□□□ 1.34
THUMPD1-203ENST00000565248 CADPS2Q86UW7 1296 aa23.43■■□□□ 1.34
THUMPD1-203ENST00000565248 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.43■■□□□ 1.34
THUMPD1-203ENST00000565248 ATF3P18847 181 aa23.42■■□□□ 1.34
THUMPD1-203ENST00000565248 L3MBTL2Q969R5 705 aa23.4■■□□□ 1.34
THUMPD1-203ENST00000565248 C19orf44Q9H6X5 657 aa23.4■■□□□ 1.34
THUMPD1-203ENST00000565248 UPF1Q92900 1129 aaKnown RBP eCLIP23.39■■□□□ 1.33
THUMPD1-203ENST00000565248 TMEM131LA2VDJ0 1609 aa23.38■■□□□ 1.33
THUMPD1-203ENST00000565248 CHGAP10645 457 aaKnown RBP23.38■■□□□ 1.33
THUMPD1-203ENST00000565248 LRP6O75581 1613 aa23.37■■□□□ 1.33
THUMPD1-203ENST00000565248 SHPRHQ149N8 1683 aa23.37■■□□□ 1.33
THUMPD1-203ENST00000565248 CLTCL1P53675 1640 aa23.37■■□□□ 1.33
THUMPD1-203ENST00000565248 RXRBP28702 533 aa23.36■■□□□ 1.33
THUMPD1-203ENST00000565248 AHDC1Q5TGY3 1603 aaPredicted RBP23.36■■□□□ 1.33
THUMPD1-203ENST00000565248 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.36■■□□□ 1.33
THUMPD1-203ENST00000565248 DIP2AQ14689 1571 aa23.35■■□□□ 1.33
THUMPD1-203ENST00000565248 PIK3R4Q99570 1358 aa23.35■■□□□ 1.33
THUMPD1-203ENST00000565248 SPATA31E1Q6ZUB1 1445 aa23.31■■□□□ 1.32
THUMPD1-203ENST00000565248 NUTM2BA6NNL0 878 aaPredicted RBP23.3■■□□□ 1.32
THUMPD1-203ENST00000565248 NUTM2EB1AL46 878 aaPredicted RBP23.3■■□□□ 1.32
THUMPD1-203ENST00000565248 RGL3Q3MIN7 710 aa23.3■■□□□ 1.32
THUMPD1-203ENST00000565248 NUTM2AQ8IVF1 878 aaPredicted RBP23.3■■□□□ 1.32
THUMPD1-203ENST00000565248 NUTM2DQ5VT03 806 aaPredicted RBP23.29■■□□□ 1.32
THUMPD1-203ENST00000565248 ADAMTS13Q76LX8 1427 aa23.29■■□□□ 1.32
THUMPD1-203ENST00000565248 STAC3Q96MF2 364 aa23.29■■□□□ 1.32
THUMPD1-203ENST00000565248 KIF1BO60333 1816 aa23.29■■□□□ 1.32
THUMPD1-203ENST00000565248 DCAF11Q8TEB1 546 aa23.28■■□□□ 1.32
THUMPD1-203ENST00000565248 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
THUMPD1-203ENST00000565248 BRINP3Q76B58 766 aa23.27■■□□□ 1.32
THUMPD1-203ENST00000565248 AMOTL2Q9Y2J4 779 aa23.27■■□□□ 1.32
THUMPD1-203ENST00000565248 DCCP43146 1447 aa23.24■■□□□ 1.31
THUMPD1-203ENST00000565248 KDM2AQ9Y2K7 1162 aa23.23■■□□□ 1.31
THUMPD1-203ENST00000565248 AFF2P51816 1311 aa23.23■■□□□ 1.31
THUMPD1-203ENST00000565248 ZNF326Q5BKZ1 582 aaKnown RBP23.22■■□□□ 1.31
THUMPD1-203ENST00000565248 LRRC59Q96AG4 307 aaKnown RBP23.21■■□□□ 1.31
THUMPD1-203ENST00000565248 RPGRIP1LQ68CZ1 1315 aa23.21■■□□□ 1.31
THUMPD1-203ENST00000565248 ASXL1Q8IXJ9 1541 aa23.19■■□□□ 1.3
THUMPD1-203ENST00000565248 PTPRUQ92729 1446 aa23.17■■□□□ 1.3
THUMPD1-203ENST00000565248 NBPF8Q3BBV2 869 aa23.17■■□□□ 1.3
THUMPD1-203ENST00000565248 RBM6P78332 1123 aaKnown RBP23.16■■□□□ 1.3
THUMPD1-203ENST00000565248 C8orf37Q96NL8 207 aa23.16■■□□□ 1.3
THUMPD1-203ENST00000565248 QTRT2Q9H974 415 aaKnown RBP23.16■■□□□ 1.3
THUMPD1-203ENST00000565248 PRAG1Q86YV5 1406 aa23.16■■□□□ 1.3
THUMPD1-203ENST00000565248 NHSL1Q5SYE7 1610 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms