RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 PLEKHG1Q9ULL1 1385 aa22.32■■□□□ 1.16
SNX29-203ENST00000564111 TRPM2O94759 1503 aa22.32■■□□□ 1.16
SNX29-203ENST00000564111 UBAP1LF5GYI3 381 aa22.3■■□□□ 1.16
SNX29-203ENST00000564111 LRRC7Q96NW7 1537 aa22.3■■□□□ 1.16
SNX29-203ENST00000564111 NKTRP30414 1462 aaKnown RBP22.3■■□□□ 1.16
SNX29-203ENST00000564111 TOM1O60784 492 aa22.29■■□□□ 1.16
SNX29-203ENST00000564111 KIF1BO60333 1816 aa22.28■■□□□ 1.16
SNX29-203ENST00000564111 PPP1R15AO75807 674 aaPredicted RBP22.26■■□□□ 1.15
SNX29-203ENST00000564111 DISP3Q9P2K9 1392 aa22.25■■□□□ 1.15
SNX29-203ENST00000564111 CLTCL1P53675 1640 aa22.23■■□□□ 1.15
SNX29-203ENST00000564111 CHD2O14647 1828 aaKnown RBP22.23■■□□□ 1.15
SNX29-203ENST00000564111 CHGAP10645 457 aaKnown RBP22.22■■□□□ 1.15
SNX29-203ENST00000564111 KCNA6P17658 529 aa22.22■■□□□ 1.15
SNX29-203ENST00000564111 PIK3R4Q99570 1358 aa22.22■■□□□ 1.15
SNX29-203ENST00000564111 XIRP1Q702N8 1843 aaKnown RBP22.21■■□□□ 1.15
SNX29-203ENST00000564111 TRIM52Q96A61 297 aa22.19■■□□□ 1.14
SNX29-203ENST00000564111 BCANQ96GW7 911 aa22.19■■□□□ 1.14
SNX29-203ENST00000564111 SETBP1Q9Y6X0 1596 aa22.18■■□□□ 1.14
SNX29-203ENST00000564111 TBX22Q9Y458 520 aa22.18■■□□□ 1.14
SNX29-203ENST00000564111 NCOA3Q9Y6Q9 1424 aa22.16■■□□□ 1.14
SNX29-203ENST00000564111 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.14
SNX29-203ENST00000564111 SOCS7O14512 581 aa22.14■■□□□ 1.13
SNX29-203ENST00000564111 ALKQ9UM73 1620 aa22.13■■□□□ 1.13
SNX29-203ENST00000564111 NEXMIFQ5QGS0 1516 aa22.13■■□□□ 1.13
SNX29-203ENST00000564111 SLC26A8Q96RN1 970 aa22.12■■□□□ 1.13
SNX29-203ENST00000564111 ADAMTS13Q76LX8 1427 aa22.12■■□□□ 1.13
SNX29-203ENST00000564111 SETD5Q9C0A6 1442 aa22.11■■□□□ 1.13
SNX29-203ENST00000564111 RPGRIP1LQ68CZ1 1315 aa22.1■■□□□ 1.13
SNX29-203ENST00000564111 ZNF326Q5BKZ1 582 aaKnown RBP22.1■■□□□ 1.13
SNX29-203ENST00000564111 SCAF1Q9H7N4 1312 aaKnown RBP22.1■■□□□ 1.13
SNX29-203ENST00000564111 TMEM94Q12767 1356 aa22.09■■□□□ 1.13
SNX29-203ENST00000564111 NRXN3Q9Y4C0 1643 aa22.09■■□□□ 1.13
SNX29-203ENST00000564111 PROSER2Q86WR7 435 aaPredicted RBP22.09■■□□□ 1.13
SNX29-203ENST00000564111 ILDR2Q71H61 639 aa22.08■■□□□ 1.13
SNX29-203ENST00000564111 MSH6P52701 1360 aa22.08■■□□□ 1.12
SNX29-203ENST00000564111 PPLO60437 1756 aa22.08■■□□□ 1.12
SNX29-203ENST00000564111 XRN1Q8IZH2 1706 aaKnown RBP22.07■■□□□ 1.12
SNX29-203ENST00000564111 PIP4K2BP78356 416 aa22.07■■□□□ 1.12
SNX29-203ENST00000564111 CCDC144AA2RUR9 1427 aa22.05■■□□□ 1.12
SNX29-203ENST00000564111 FAM135BQ49AJ0 1406 aa22.03■■□□□ 1.12
SNX29-203ENST00000564111 MED1Q15648 1581 aaPredicted RBP22.03■■□□□ 1.12
SNX29-203ENST00000564111 VGFO15240 615 aaPredicted RBP22.02■■□□□ 1.12
SNX29-203ENST00000564111 MPHOSPH9Q99550 1183 aa22■■□□□ 1.11
SNX29-203ENST00000564111 IFT172Q9UG01 1749 aa22■■□□□ 1.11
SNX29-203ENST00000564111 DCCP43146 1447 aa21.99■■□□□ 1.11
SNX29-203ENST00000564111 HSPA1LP34931 641 aa21.99■■□□□ 1.11
SNX29-203ENST00000564111 SETD1AO15047 1707 aaKnown RBP21.98■■□□□ 1.11
SNX29-203ENST00000564111 HRCP23327 699 aa21.98■■□□□ 1.11
SNX29-203ENST00000564111 ROBO1Q9Y6N7 1651 aa21.98■■□□□ 1.11
SNX29-203ENST00000564111 NUTM2DQ5VT03 806 aaPredicted RBP21.97■■□□□ 1.11
SNX29-203ENST00000564111 PRAG1Q86YV5 1406 aa21.97■■□□□ 1.11
SNX29-203ENST00000564111 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.96■■□□□ 1.11
SNX29-203ENST00000564111 ANKRD30BQ9BXX2 1392 aa21.96■■□□□ 1.11
SNX29-203ENST00000564111 RAB3GAP2Q9H2M9 1393 aa21.95■■□□□ 1.1
SNX29-203ENST00000564111 AMOTL2Q9Y2J4 779 aa21.94■■□□□ 1.1
SNX29-203ENST00000564111 PTPRUQ92729 1446 aa21.93■■□□□ 1.1
SNX29-203ENST00000564111 PTCH1Q13635 1447 aa21.93■■□□□ 1.1
SNX29-203ENST00000564111 SPATA31E1Q6ZUB1 1445 aa21.93■■□□□ 1.1
SNX29-203ENST00000564111 CADPS2Q86UW7 1296 aa21.92■■□□□ 1.1
SNX29-203ENST00000564111 C14orf37Q86TY3 774 aa21.92■■□□□ 1.1
SNX29-203ENST00000564111 LAMC1P11047 1609 aa21.91■■□□□ 1.1
SNX29-203ENST00000564111 C19orf44Q9H6X5 657 aa21.91■■□□□ 1.1
SNX29-203ENST00000564111 PHLPP1O60346 1717 aa21.89■■□□□ 1.1
SNX29-203ENST00000564111 ATF3P18847 181 aa21.89■■□□□ 1.09
SNX29-203ENST00000564111 METP08581 1390 aa21.88■■□□□ 1.09
SNX29-203ENST00000564111 KNDC1Q76NI1 1749 aa21.88■■□□□ 1.09
SNX29-203ENST00000564111 SENP3Q9H4L4 574 aaPredicted RBP21.87■■□□□ 1.09
SNX29-203ENST00000564111 ADGRL3Q9HAR2 1447 aa21.87■■□□□ 1.09
SNX29-203ENST00000564111 SLAIN2Q9P270 581 aa21.87■■□□□ 1.09
SNX29-203ENST00000564111 MYOM2P54296 1465 aa21.86■■□□□ 1.09
SNX29-203ENST00000564111 AHDC1Q5TGY3 1603 aaPredicted RBP21.86■■□□□ 1.09
SNX29-203ENST00000564111 NALCNQ8IZF0 1738 aa21.85■■□□□ 1.09
SNX29-203ENST00000564111 FOXD1Q16676 465 aa21.84■■□□□ 1.09
SNX29-203ENST00000564111 PIK3C2GO75747 1445 aa21.81■■□□□ 1.08
SNX29-203ENST00000564111 RBM33Q96EV2 1170 aaKnown RBP21.8■■□□□ 1.08
SNX29-203ENST00000564111 COL16A1Q07092 1604 aaPredicted RBP21.8■■□□□ 1.08
SNX29-203ENST00000564111 NRXN1Q9ULB1 1477 aa21.79■■□□□ 1.08
SNX29-203ENST00000564111 TECPR2O15040 1411 aa21.79■■□□□ 1.08
SNX29-203ENST00000564111 STAC3Q96MF2 364 aa21.79■■□□□ 1.08
SNX29-203ENST00000564111 NHSL1Q5SYE7 1610 aa21.77■■□□□ 1.08
SNX29-203ENST00000564111 SHPRHQ149N8 1683 aa21.77■■□□□ 1.08
SNX29-203ENST00000564111 CDC42BPGQ6DT37 1551 aa21.77■■□□□ 1.08
SNX29-203ENST00000564111 MST1RQ04912 1400 aa21.76■■□□□ 1.07
SNX29-203ENST00000564111 ASXL1Q8IXJ9 1541 aa21.76■■□□□ 1.07
SNX29-203ENST00000564111 LRPPRCP42704 1394 aaKnown RBP21.76■■□□□ 1.07
SNX29-203ENST00000564111 JCADQ9P266 1359 aa21.76■■□□□ 1.07
SNX29-203ENST00000564111 RGL3Q3MIN7 710 aa21.75■■□□□ 1.07
SNX29-203ENST00000564111 PHF23Q9BUL5 403 aaPredicted RBP21.75■■□□□ 1.07
SNX29-203ENST00000564111 ADGRF5Q8IZF2 1346 aa21.74■■□□□ 1.07
SNX29-203ENST00000564111 ROBO2Q9HCK4 1378 aa21.73■■□□□ 1.07
SNX29-203ENST00000564111 ABCC11Q96J66 1382 aa21.72■■□□□ 1.07
SNX29-203ENST00000564111 SIRT1Q96EB6 747 aa21.7■■□□□ 1.06
SNX29-203ENST00000564111 YTHDC2Q9H6S0 1430 aaKnown RBP21.69■■□□□ 1.06
SNX29-203ENST00000564111 SPATA31A6Q5VVP1 1343 aa21.69■■□□□ 1.06
SNX29-203ENST00000564111 DLC1Q96QB1 1528 aa21.68■■□□□ 1.06
SNX29-203ENST00000564111 DHX57Q6P158 1386 aaKnown RBP21.68■■□□□ 1.06
SNX29-203ENST00000564111 BRINP3Q76B58 766 aa21.68■■□□□ 1.06
SNX29-203ENST00000564111 C1orf167Q5SNV9 1468 aa21.67■■□□□ 1.06
SNX29-203ENST00000564111 C14orf93Q9H972 538 aaKnown RBP21.67■■□□□ 1.06
SNX29-203ENST00000564111 KIF1AQ12756 1690 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms