RNA–Protein interactions for RNA: ENST00000562431.1

LPCAT4-203, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 341 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-203ENST00000562431 IDI1Q13907 227 aa17.29■□□□□ 0.36
LPCAT4-203ENST00000562431 XIRP1Q702N8 1843 aaKnown RBP17.28■□□□□ 0.36
LPCAT4-203ENST00000562431 SPHKAPQ2M3C7 1700 aa17.28■□□□□ 0.36
LPCAT4-203ENST00000562431 TRPM2O94759 1503 aa17.27■□□□□ 0.36
LPCAT4-203ENST00000562431 CHGAP10645 457 aaKnown RBP17.27■□□□□ 0.36
LPCAT4-203ENST00000562431 ARHGAP23Q9P227 1491 aa17.25■□□□□ 0.35
LPCAT4-203ENST00000562431 CCDC144AA2RUR9 1427 aa17.24■□□□□ 0.35
LPCAT4-203ENST00000562431 SLIT1O75093 1534 aa17.24■□□□□ 0.35
LPCAT4-203ENST00000562431 PIK3C2BO00750 1634 aa17.24■□□□□ 0.35
LPCAT4-203ENST00000562431 SCAF11Q99590 1463 aaKnown RBP17.24■□□□□ 0.35
LPCAT4-203ENST00000562431 DHX57Q6P158 1386 aaKnown RBP17.23■□□□□ 0.35
LPCAT4-203ENST00000562431 ADGRB3O60242 1522 aa17.21■□□□□ 0.35
LPCAT4-203ENST00000562431 CLTCL1P53675 1640 aa17.21■□□□□ 0.35
LPCAT4-203ENST00000562431 ANKRD30BQ9BXX2 1392 aa17.21■□□□□ 0.35
LPCAT4-203ENST00000562431 ZNF326Q5BKZ1 582 aaKnown RBP17.18■□□□□ 0.34
LPCAT4-203ENST00000562431 LTKP29376 864 aa17.17■□□□□ 0.34
LPCAT4-203ENST00000562431 PHF23Q9BUL5 403 aaPredicted RBP17.16■□□□□ 0.34
LPCAT4-203ENST00000562431 RGS17Q9UGC6 210 aaPredicted RBP17.16■□□□□ 0.34
LPCAT4-203ENST00000562431 TMEM131LA2VDJ0 1609 aa17.16■□□□□ 0.34
LPCAT4-203ENST00000562431 KDM5AP29375 1690 aaKnown RBP17.16■□□□□ 0.34
LPCAT4-203ENST00000562431 TMEM2Q9UHN6 1383 aa17.15■□□□□ 0.34
LPCAT4-203ENST00000562431 EID1Q9Y6B2 187 aa17.15■□□□□ 0.34
LPCAT4-203ENST00000562431 KIF1BO60333 1816 aa17.13■□□□□ 0.33
LPCAT4-203ENST00000562431 HDGFP51858 240 aaKnown RBP17.13■□□□□ 0.33
LPCAT4-203ENST00000562431 RGL3Q3MIN7 710 aa17.13■□□□□ 0.33
LPCAT4-203ENST00000562431 TXNDC2Q86VQ3 553 aa17.13■□□□□ 0.33
LPCAT4-203ENST00000562431 RIMS2Q9UQ26 1411 aa17.13■□□□□ 0.33
LPCAT4-203ENST00000562431 PPP1R15AO75807 674 aaPredicted RBP17.12■□□□□ 0.33
LPCAT4-203ENST00000562431 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
LPCAT4-203ENST00000562431 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.11■□□□□ 0.33
LPCAT4-203ENST00000562431 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
LPCAT4-203ENST00000562431 MYO5BQ9ULV0 1848 aa17.11■□□□□ 0.33
LPCAT4-203ENST00000562431 CCER1Q8TC90 406 aaPredicted RBP17.1■□□□□ 0.33
LPCAT4-203ENST00000562431 FAM135BQ49AJ0 1406 aa17.1■□□□□ 0.33
LPCAT4-203ENST00000562431 SPATA31E1Q6ZUB1 1445 aa17.1■□□□□ 0.33
LPCAT4-203ENST00000562431 NEUROD1Q13562 356 aa17.09■□□□□ 0.33
LPCAT4-203ENST00000562431 ZFYVE9O95405 1425 aa17.09■□□□□ 0.33
LPCAT4-203ENST00000562431 NWD1Q149M9 1564 aa17.09■□□□□ 0.33
LPCAT4-203ENST00000562431 ROBO1Q9Y6N7 1651 aa17.08■□□□□ 0.32
LPCAT4-203ENST00000562431 RPGRIP1LQ68CZ1 1315 aa17.08■□□□□ 0.32
LPCAT4-203ENST00000562431 BCANQ96GW7 911 aa17.08■□□□□ 0.32
LPCAT4-203ENST00000562431 SIN3AQ96ST3 1273 aa17.08■□□□□ 0.32
LPCAT4-203ENST00000562431 TMEM94Q12767 1356 aa17.05■□□□□ 0.32
LPCAT4-203ENST00000562431 NEXMIFQ5QGS0 1516 aa17.05■□□□□ 0.32
LPCAT4-203ENST00000562431 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
LPCAT4-203ENST00000562431 PLEKHG1Q9ULL1 1385 aa17.03■□□□□ 0.32
LPCAT4-203ENST00000562431 NKTRP30414 1462 aaKnown RBP17.03■□□□□ 0.32
LPCAT4-203ENST00000562431 CLSPNQ9HAW4 1339 aa17.02■□□□□ 0.32
LPCAT4-203ENST00000562431 DCAF11Q8TEB1 546 aa17.01■□□□□ 0.31
LPCAT4-203ENST00000562431 KDM2AQ9Y2K7 1162 aa17.01■□□□□ 0.31
LPCAT4-203ENST00000562431 SETD1AO15047 1707 aaKnown RBP17■□□□□ 0.31
LPCAT4-203ENST00000562431 POTEAQ6S8J7 498 aa17■□□□□ 0.31
LPCAT4-203ENST00000562431 KCNA6P17658 529 aa16.99■□□□□ 0.31
LPCAT4-203ENST00000562431 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
LPCAT4-203ENST00000562431 PPLO60437 1756 aa16.99■□□□□ 0.31
LPCAT4-203ENST00000562431 TONSLQ96HA7 1378 aa16.99■□□□□ 0.31
LPCAT4-203ENST00000562431 ADGRF5Q8IZF2 1346 aa16.98■□□□□ 0.31
LPCAT4-203ENST00000562431 CHD2O14647 1828 aaKnown RBP16.97■□□□□ 0.31
LPCAT4-203ENST00000562431 COL16A1Q07092 1604 aaPredicted RBP16.96■□□□□ 0.31
LPCAT4-203ENST00000562431 PHLPP1O60346 1717 aa16.96■□□□□ 0.31
LPCAT4-203ENST00000562431 L3MBTL2Q969R5 705 aa16.96■□□□□ 0.31
LPCAT4-203ENST00000562431 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
LPCAT4-203ENST00000562431 MYOM2P54296 1465 aa16.96■□□□□ 0.31
LPCAT4-203ENST00000562431 IFT172Q9UG01 1749 aa16.96■□□□□ 0.3
LPCAT4-203ENST00000562431 RBM33Q96EV2 1170 aaKnown RBP16.95■□□□□ 0.3
LPCAT4-203ENST00000562431 ADAMTS13Q76LX8 1427 aa16.94■□□□□ 0.3
LPCAT4-203ENST00000562431 SETBP1Q9Y6X0 1596 aa16.94■□□□□ 0.3
LPCAT4-203ENST00000562431 TBX22Q9Y458 520 aa16.93■□□□□ 0.3
LPCAT4-203ENST00000562431 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
LPCAT4-203ENST00000562431 DIP2AQ14689 1571 aa16.92■□□□□ 0.3
LPCAT4-203ENST00000562431 PROSER2Q86WR7 435 aaPredicted RBP16.91■□□□□ 0.3
LPCAT4-203ENST00000562431 NRXN3Q9Y4C0 1643 aa16.91■□□□□ 0.3
LPCAT4-203ENST00000562431 NRXN1Q9ULB1 1477 aa16.91■□□□□ 0.3
LPCAT4-203ENST00000562431 LRP6O75581 1613 aa16.9■□□□□ 0.3
LPCAT4-203ENST00000562431 MSH6P52701 1360 aa16.89■□□□□ 0.3
LPCAT4-203ENST00000562431 CFAP70Q5T0N1 1121 aa16.88■□□□□ 0.29
LPCAT4-203ENST00000562431 METP08581 1390 aa16.88■□□□□ 0.29
LPCAT4-203ENST00000562431 JCADQ9P266 1359 aa16.88■□□□□ 0.29
LPCAT4-203ENST00000562431 C14orf93Q9H972 538 aaKnown RBP16.87■□□□□ 0.29
LPCAT4-203ENST00000562431 AHDC1Q5TGY3 1603 aaPredicted RBP16.87■□□□□ 0.29
LPCAT4-203ENST00000562431 PIK3R4Q99570 1358 aa16.87■□□□□ 0.29
LPCAT4-203ENST00000562431 PRAG1Q86YV5 1406 aa16.87■□□□□ 0.29
LPCAT4-203ENST00000562431 SHPRHQ149N8 1683 aa16.86■□□□□ 0.29
LPCAT4-203ENST00000562431 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
LPCAT4-203ENST00000562431 TIMELESSQ9UNS1 1208 aa16.86■□□□□ 0.29
LPCAT4-203ENST00000562431 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.85■□□□□ 0.29
LPCAT4-203ENST00000562431 NCOA3Q9Y6Q9 1424 aa16.85■□□□□ 0.29
LPCAT4-203ENST00000562431 TMEM132EQ6IEE7 984 aa16.84■□□□□ 0.29
LPCAT4-203ENST00000562431 AMOTL2Q9Y2J4 779 aa16.84■□□□□ 0.29
LPCAT4-203ENST00000562431 LAMC1P11047 1609 aa16.84■□□□□ 0.29
LPCAT4-203ENST00000562431 PTPRUQ92729 1446 aa16.83■□□□□ 0.28
LPCAT4-203ENST00000562431 STK26Q9P289 416 aa16.82■□□□□ 0.28
LPCAT4-203ENST00000562431 NBPF8Q3BBV2 869 aa16.8■□□□□ 0.28
LPCAT4-203ENST00000562431 ASXL1Q8IXJ9 1541 aa16.8■□□□□ 0.28
LPCAT4-203ENST00000562431 LRPPRCP42704 1394 aaKnown RBP16.79■□□□□ 0.28
LPCAT4-203ENST00000562431 YTHDC2Q9H6S0 1430 aaKnown RBP16.79■□□□□ 0.28
LPCAT4-203ENST00000562431 SPATA31A6Q5VVP1 1343 aa16.78■□□□□ 0.28
LPCAT4-203ENST00000562431 NBPF1Q3BBV0 1214 aa16.78■□□□□ 0.28
LPCAT4-203ENST00000562431 XRN1Q8IZH2 1706 aaKnown RBP16.78■□□□□ 0.28
LPCAT4-203ENST00000562431 ROCK2O75116 1388 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms