RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 CHGAP10645 457 aaKnown RBP20.15■□□□□ 0.82
COMMD4-205ENST00000562310 FBXO31Q5XUX0 539 aaPredicted RBP20.15■□□□□ 0.82
COMMD4-205ENST00000562310 USP47Q96K76 1375 aa20.15■□□□□ 0.82
COMMD4-205ENST00000562310 ADAMTSL3P82987 1691 aa20.14■□□□□ 0.81
COMMD4-205ENST00000562310 TNRQ92752 1358 aa20.14■□□□□ 0.81
COMMD4-205ENST00000562310 HSPA5P11021 654 aaKnown RBP20.14■□□□□ 0.81
COMMD4-205ENST00000562310 IDI1Q13907 227 aa20.14■□□□□ 0.81
COMMD4-205ENST00000562310 ZFYVE9O95405 1425 aa20.12■□□□□ 0.81
COMMD4-205ENST00000562310 CARD11Q9BXL7 1154 aa20.12■□□□□ 0.81
COMMD4-205ENST00000562310 IQGAP1P46940 1657 aa20.12■□□□□ 0.81
COMMD4-205ENST00000562310 RIMS1Q86UR5 1692 aaKnown RBP20.12■□□□□ 0.81
COMMD4-205ENST00000562310 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
COMMD4-205ENST00000562310 NLRP1Q9C000 1473 aa20.11■□□□□ 0.81
COMMD4-205ENST00000562310 SETBP1Q9Y6X0 1596 aa20.1■□□□□ 0.81
COMMD4-205ENST00000562310 PIK3C2GO75747 1445 aa20.1■□□□□ 0.81
COMMD4-205ENST00000562310 A2ML1A8K2U0 1454 aa20.09■□□□□ 0.81
COMMD4-205ENST00000562310 UBR1Q8IWV7 1749 aa20.07■□□□□ 0.8
COMMD4-205ENST00000562310 VGFO15240 615 aaPredicted RBP20.06■□□□□ 0.8
COMMD4-205ENST00000562310 ADGRF5Q8IZF2 1346 aa20.05■□□□□ 0.8
COMMD4-205ENST00000562310 STAG3Q9UJ98 1225 aa20.05■□□□□ 0.8
COMMD4-205ENST00000562310 MYO3AQ8NEV4 1616 aa20.05■□□□□ 0.8
COMMD4-205ENST00000562310 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
COMMD4-205ENST00000562310 HIRIP3Q9BW71 556 aaPredicted RBP20.03■□□□□ 0.8
COMMD4-205ENST00000562310 NBPF1Q3BBV0 1214 aa20.02■□□□□ 0.8
COMMD4-205ENST00000562310 EIF3AQ14152 1382 aaKnown RBP20.01■□□□□ 0.79
COMMD4-205ENST00000562310 RIMS2Q9UQ26 1411 aa20.01■□□□□ 0.79
COMMD4-205ENST00000562310 ADGRB1O14514 1584 aa19.99■□□□□ 0.79
COMMD4-205ENST00000562310 ZNF142P52746 1687 aaPredicted RBP19.98■□□□□ 0.79
COMMD4-205ENST00000562310 C14orf93Q9H972 538 aaKnown RBP19.98■□□□□ 0.79
COMMD4-205ENST00000562310 CCDC7Q96M83 1385 aa19.97■□□□□ 0.79
COMMD4-205ENST00000562310 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.97■□□□□ 0.79
COMMD4-205ENST00000562310 CFAP70Q5T0N1 1121 aa19.96■□□□□ 0.79
COMMD4-205ENST00000562310 CEBPAP49715 358 aaPredicted RBP19.95■□□□□ 0.78
COMMD4-205ENST00000562310 HDGFP51858 240 aaKnown RBP19.95■□□□□ 0.78
COMMD4-205ENST00000562310 WASHC2AQ641Q2 1341 aa19.95■□□□□ 0.78
COMMD4-205ENST00000562310 CEP170BQ9Y4F5 1589 aaPredicted RBP19.95■□□□□ 0.78
COMMD4-205ENST00000562310 SLIT1O75093 1534 aa19.94■□□□□ 0.78
COMMD4-205ENST00000562310 ST20-MTHFSA0A0A6YYL1 179 aa19.94■□□□□ 0.78
COMMD4-205ENST00000562310 TMEM2Q9UHN6 1383 aa19.94■□□□□ 0.78
COMMD4-205ENST00000562310 SETD1AO15047 1707 aaKnown RBP19.93■□□□□ 0.78
COMMD4-205ENST00000562310 SETD1BQ9UPS6 1966 aaKnown RBP19.92■□□□□ 0.78
COMMD4-205ENST00000562310 ALKQ9UM73 1620 aa19.92■□□□□ 0.78
COMMD4-205ENST00000562310 ARHGAP23Q9P227 1491 aa19.92■□□□□ 0.78
COMMD4-205ENST00000562310 KIF7Q2M1P5 1343 aa19.91■□□□□ 0.78
COMMD4-205ENST00000562310 ASXL1Q8IXJ9 1541 aa19.91■□□□□ 0.78
COMMD4-205ENST00000562310 NRXN3Q9Y4C0 1643 aa19.91■□□□□ 0.78
COMMD4-205ENST00000562310 ARHGEF28Q8N1W1 1705 aaKnown RBP19.9■□□□□ 0.78
COMMD4-205ENST00000562310 SLC24A1O60721 1099 aa19.9■□□□□ 0.78
COMMD4-205ENST00000562310 DDX10Q13206 875 aaKnown RBP19.89■□□□□ 0.77
COMMD4-205ENST00000562310 PTPRMP28827 1452 aa19.88■□□□□ 0.77
COMMD4-205ENST00000562310 NUTM2DQ5VT03 806 aaPredicted RBP19.88■□□□□ 0.77
COMMD4-205ENST00000562310 QRICH2Q9H0J4 1663 aa19.87■□□□□ 0.77
COMMD4-205ENST00000562310 SBNO2Q9Y2G9 1366 aa19.87■□□□□ 0.77
COMMD4-205ENST00000562310 C11orf95C9JLR9 678 aaPredicted RBP19.86■□□□□ 0.77
COMMD4-205ENST00000562310 TESK2Q96S53 571 aa19.86■□□□□ 0.77
COMMD4-205ENST00000562310 THEMISQ8N1K5 641 aaPredicted RBP19.85■□□□□ 0.77
COMMD4-205ENST00000562310 PLEKHG1Q9ULL1 1385 aa19.84■□□□□ 0.77
COMMD4-205ENST00000562310 TMF1P82094 1093 aa19.84■□□□□ 0.77
COMMD4-205ENST00000562310 PLPPR3Q6T4P5 718 aa19.84■□□□□ 0.77
COMMD4-205ENST00000562310 KNDC1Q76NI1 1749 aa19.84■□□□□ 0.77
COMMD4-205ENST00000562310 DIP2AQ14689 1571 aa19.83■□□□□ 0.77
COMMD4-205ENST00000562310 DLC1Q96QB1 1528 aa19.83■□□□□ 0.77
COMMD4-205ENST00000562310 CDCA8Q53HL2 280 aa19.82■□□□□ 0.76
COMMD4-205ENST00000562310 EID1Q9Y6B2 187 aa19.82■□□□□ 0.76
COMMD4-205ENST00000562310 YTHDC2Q9H6S0 1430 aaKnown RBP19.82■□□□□ 0.76
COMMD4-205ENST00000562310 CENPJQ9HC77 1338 aaPredicted RBP19.81■□□□□ 0.76
COMMD4-205ENST00000562310 DISP3Q9P2K9 1392 aa19.81■□□□□ 0.76
COMMD4-205ENST00000562310 TMEM132EQ6IEE7 984 aa19.79■□□□□ 0.76
COMMD4-205ENST00000562310 LRPPRCP42704 1394 aaKnown RBP19.79■□□□□ 0.76
COMMD4-205ENST00000562310 TRAK1Q9UPV9 953 aa19.77■□□□□ 0.76
COMMD4-205ENST00000562310 TXNDC2Q86VQ3 553 aa19.76■□□□□ 0.75
COMMD4-205ENST00000562310 MIER1Q8N108 512 aa19.76■□□□□ 0.75
COMMD4-205ENST00000562310 CPS1P31327 1500 aa19.76■□□□□ 0.75
COMMD4-205ENST00000562310 ADAMTS13Q76LX8 1427 aa19.76■□□□□ 0.75
COMMD4-205ENST00000562310 MED14O60244 1454 aa19.75■□□□□ 0.75
COMMD4-205ENST00000562310 TECPR2O15040 1411 aa19.75■□□□□ 0.75
COMMD4-205ENST00000562310 MYOM1P52179 1685 aa19.75■□□□□ 0.75
COMMD4-205ENST00000562310 ABCC11Q96J66 1382 aa19.74■□□□□ 0.75
COMMD4-205ENST00000562310 FBXO41Q8TF61 875 aa19.74■□□□□ 0.75
COMMD4-205ENST00000562310 POLR3GLQ9BT43 218 aa19.74■□□□□ 0.75
COMMD4-205ENST00000562310 ANP32CO43423 234 aa19.73■□□□□ 0.75
COMMD4-205ENST00000562310 LTKP29376 864 aa19.73■□□□□ 0.75
COMMD4-205ENST00000562310 BCANQ96GW7 911 aa19.71■□□□□ 0.75
COMMD4-205ENST00000562310 FAM135BQ49AJ0 1406 aa19.7■□□□□ 0.74
COMMD4-205ENST00000562310 METP08581 1390 aa19.7■□□□□ 0.74
COMMD4-205ENST00000562310 STK26Q9P289 416 aa19.69■□□□□ 0.74
COMMD4-205ENST00000562310 TULP4Q9NRJ4 1543 aa19.69■□□□□ 0.74
COMMD4-205ENST00000562310 SIRT1Q96EB6 747 aa19.68■□□□□ 0.74
COMMD4-205ENST00000562310 PUS7Q96PZ0 661 aaKnown RBP19.68■□□□□ 0.74
COMMD4-205ENST00000562310 ANKLE2Q86XL3 938 aa19.67■□□□□ 0.74
COMMD4-205ENST00000562310 SENP3Q9H4L4 574 aaPredicted RBP19.67■□□□□ 0.74
COMMD4-205ENST00000562310 TBX22Q9Y458 520 aa19.67■□□□□ 0.74
COMMD4-205ENST00000562310 EVC2Q86UK5 1308 aa19.67■□□□□ 0.74
COMMD4-205ENST00000562310 PIK3R4Q99570 1358 aa19.67■□□□□ 0.74
COMMD4-205ENST00000562310 XRN1Q8IZH2 1706 aaKnown RBP19.66■□□□□ 0.74
COMMD4-205ENST00000562310 POGKQ9P215 609 aa19.66■□□□□ 0.74
COMMD4-205ENST00000562310 PRAM1Q96QH2 718 aa19.65■□□□□ 0.74
COMMD4-205ENST00000562310 PTCH1Q13635 1447 aa19.64■□□□□ 0.73
COMMD4-205ENST00000562310 ADGRB2O60241 1585 aa19.63■□□□□ 0.73
COMMD4-205ENST00000562310 KTN1Q86UP2 1357 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms