RNA–Protein interactions for RNA: ENST00000562204.1

ACSF3-216, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 3

Gene ACSF3, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-216ENST00000562204 UPF1Q92900 1129 aaKnown RBP eCLIP19.55■□□□□ 0.72
ACSF3-216ENST00000562204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.55■□□□□ 0.72
ACSF3-216ENST00000562204 IDI1Q13907 227 aa19.54■□□□□ 0.72
ACSF3-216ENST00000562204 AHDC1Q5TGY3 1603 aaPredicted RBP19.53■□□□□ 0.72
ACSF3-216ENST00000562204 SPATA31A6Q5VVP1 1343 aa19.52■□□□□ 0.72
ACSF3-216ENST00000562204 NOS1P29475 1434 aa19.52■□□□□ 0.72
ACSF3-216ENST00000562204 MEX3CQ5U5Q3 659 aaKnown RBP19.52■□□□□ 0.72
ACSF3-216ENST00000562204 MYO5BQ9ULV0 1848 aa19.52■□□□□ 0.72
ACSF3-216ENST00000562204 ABCC5O15440 1437 aa19.51■□□□□ 0.71
ACSF3-216ENST00000562204 ZNF772Q68DY9 489 aaPredicted RBP19.51■□□□□ 0.71
ACSF3-216ENST00000562204 TRIM52Q96A61 297 aa19.51■□□□□ 0.71
ACSF3-216ENST00000562204 RRP7BPQ9NSQ0 103 aa19.51■□□□□ 0.71
ACSF3-216ENST00000562204 PTPN23Q9H3S7 1636 aa19.51■□□□□ 0.71
ACSF3-216ENST00000562204 SRCAPQ6ZRS2 3230 aa19.49■□□□□ 0.71
ACSF3-216ENST00000562204 GCC2Q8IWJ2 1684 aa19.49■□□□□ 0.71
ACSF3-216ENST00000562204 BCANQ96GW7 911 aa19.49■□□□□ 0.71
ACSF3-216ENST00000562204 ZFYVE9O95405 1425 aa19.49■□□□□ 0.71
ACSF3-216ENST00000562204 PLEKHG1Q9ULL1 1385 aa19.48■□□□□ 0.71
ACSF3-216ENST00000562204 DAPK1P53355 1430 aa19.48■□□□□ 0.71
ACSF3-216ENST00000562204 CDK12Q9NYV4 1490 aaPredicted RBP19.48■□□□□ 0.71
ACSF3-216ENST00000562204 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.47■□□□□ 0.71
ACSF3-216ENST00000562204 NCOA3Q9Y6Q9 1424 aa19.46■□□□□ 0.71
ACSF3-216ENST00000562204 DIP2AQ14689 1571 aa19.44■□□□□ 0.7
ACSF3-216ENST00000562204 SLC52A1Q9NWF4 448 aa19.44■□□□□ 0.7
ACSF3-216ENST00000562204 RIMS2Q9UQ26 1411 aa19.43■□□□□ 0.7
ACSF3-216ENST00000562204 RPRD2Q5VT52 1461 aaKnown RBP19.43■□□□□ 0.7
ACSF3-216ENST00000562204 PPP1R15AO75807 674 aaPredicted RBP19.42■□□□□ 0.7
ACSF3-216ENST00000562204 RXRBP28702 533 aa19.42■□□□□ 0.7
ACSF3-216ENST00000562204 C14orf37Q86TY3 774 aa19.42■□□□□ 0.7
ACSF3-216ENST00000562204 TMEM131LA2VDJ0 1609 aa19.42■□□□□ 0.7
ACSF3-216ENST00000562204 ANKRD30AQ9BXX3 1397 aa19.42■□□□□ 0.7
ACSF3-216ENST00000562204 CADPS2Q86UW7 1296 aa19.39■□□□□ 0.69
ACSF3-216ENST00000562204 RRBP1Q9P2E9 1410 aaKnown RBP19.38■□□□□ 0.69
ACSF3-216ENST00000562204 ADAMTS13Q76LX8 1427 aa19.36■□□□□ 0.69
ACSF3-216ENST00000562204 ATF3P18847 181 aa19.36■□□□□ 0.69
ACSF3-216ENST00000562204 TBX22Q9Y458 520 aa19.36■□□□□ 0.69
ACSF3-216ENST00000562204 NHSL1Q5SYE7 1610 aa19.36■□□□□ 0.69
ACSF3-216ENST00000562204 ASXL1Q8IXJ9 1541 aa19.35■□□□□ 0.69
ACSF3-216ENST00000562204 RGS12O14924 1447 aa19.35■□□□□ 0.69
ACSF3-216ENST00000562204 AFF2P51816 1311 aa19.35■□□□□ 0.69
ACSF3-216ENST00000562204 NUTM2BA6NNL0 878 aaPredicted RBP19.35■□□□□ 0.69
ACSF3-216ENST00000562204 NUTM2EB1AL46 878 aaPredicted RBP19.35■□□□□ 0.69
ACSF3-216ENST00000562204 NUTM2AQ8IVF1 878 aaPredicted RBP19.35■□□□□ 0.69
ACSF3-216ENST00000562204 C19orf44Q9H6X5 657 aa19.35■□□□□ 0.69
ACSF3-216ENST00000562204 TRPM2O94759 1503 aa19.35■□□□□ 0.69
ACSF3-216ENST00000562204 PIK3R4Q99570 1358 aa19.34■□□□□ 0.69
ACSF3-216ENST00000562204 HDGFP51858 240 aaKnown RBP19.34■□□□□ 0.69
ACSF3-216ENST00000562204 CHIC2Q9UKJ5 165 aa19.34■□□□□ 0.69
ACSF3-216ENST00000562204 ADGRL2O95490 1459 aa19.34■□□□□ 0.69
ACSF3-216ENST00000562204 DCCP43146 1447 aa19.34■□□□□ 0.69
ACSF3-216ENST00000562204 BRINP3Q76B58 766 aa19.33■□□□□ 0.68
ACSF3-216ENST00000562204 TRIM26Q12899 539 aaPredicted RBP19.32■□□□□ 0.68
ACSF3-216ENST00000562204 SETD5Q9C0A6 1442 aa19.32■□□□□ 0.68
ACSF3-216ENST00000562204 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.31■□□□□ 0.68
ACSF3-216ENST00000562204 UNC13BO14795 1591 aa19.3■□□□□ 0.68
ACSF3-216ENST00000562204 XRN1Q8IZH2 1706 aaKnown RBP19.3■□□□□ 0.68
ACSF3-216ENST00000562204 ANKRD50Q9ULJ7 1429 aa19.28■□□□□ 0.68
ACSF3-216ENST00000562204 E9PCH4 1651 aa19.28■□□□□ 0.68
ACSF3-216ENST00000562204 FAM50AQ14320 339 aaKnown RBP19.28■□□□□ 0.68
ACSF3-216ENST00000562204 MST1RQ04912 1400 aa19.26■□□□□ 0.67
ACSF3-216ENST00000562204 PTPRUQ92729 1446 aa19.26■□□□□ 0.67
ACSF3-216ENST00000562204 NUTM2DQ5VT03 806 aaPredicted RBP19.26■□□□□ 0.67
ACSF3-216ENST00000562204 CHGAP10645 457 aaKnown RBP19.25■□□□□ 0.67
ACSF3-216ENST00000562204 RBM6P78332 1123 aaKnown RBP19.25■□□□□ 0.67
ACSF3-216ENST00000562204 C8orf37Q96NL8 207 aa19.25■□□□□ 0.67
ACSF3-216ENST00000562204 NRXN3Q9Y4C0 1643 aa19.25■□□□□ 0.67
ACSF3-216ENST00000562204 PNPLA6Q8IY17 1366 aa19.24■□□□□ 0.67
ACSF3-216ENST00000562204 AMOTL2Q9Y2J4 779 aa19.23■□□□□ 0.67
ACSF3-216ENST00000562204 EP400Q96L91 3159 aa19.23■□□□□ 0.67
ACSF3-216ENST00000562204 ATAD2Q6PL18 1390 aa19.22■□□□□ 0.67
ACSF3-216ENST00000562204 QTRT2Q9H974 415 aaKnown RBP19.22■□□□□ 0.67
ACSF3-216ENST00000562204 NALCNQ8IZF0 1738 aa19.21■□□□□ 0.67
ACSF3-216ENST00000562204 LRRC59Q96AG4 307 aaKnown RBP19.21■□□□□ 0.67
ACSF3-216ENST00000562204 SETBP1Q9Y6X0 1596 aa19.21■□□□□ 0.67
ACSF3-216ENST00000562204 IQGAP3Q86VI3 1631 aa19.2■□□□□ 0.66
ACSF3-216ENST00000562204 ADGRL3Q9HAR2 1447 aa19.19■□□□□ 0.66
ACSF3-216ENST00000562204 LAMC1P11047 1609 aa19.17■□□□□ 0.66
ACSF3-216ENST00000562204 NGLY1Q96IV0 654 aa19.16■□□□□ 0.66
ACSF3-216ENST00000562204 DDX17Q92841 729 aaKnown RBP19.15■□□□□ 0.66
ACSF3-216ENST00000562204 FOXD1Q16676 465 aa19.14■□□□□ 0.65
ACSF3-216ENST00000562204 ADAMTS2O95450 1211 aa19.13■□□□□ 0.65
ACSF3-216ENST00000562204 ZRANB1Q9UGI0 708 aa19.13■□□□□ 0.65
ACSF3-216ENST00000562204 ITGAEP38570 1179 aa19.12■□□□□ 0.65
ACSF3-216ENST00000562204 PCGF6Q9BYE7 350 aa19.12■□□□□ 0.65
ACSF3-216ENST00000562204 SPHKAPQ2M3C7 1700 aa19.11■□□□□ 0.65
ACSF3-216ENST00000562204 METP08581 1390 aa19.1■□□□□ 0.65
ACSF3-216ENST00000562204 C1orf167Q5SNV9 1468 aa19.09■□□□□ 0.65
ACSF3-216ENST00000562204 ATRNO75882 1429 aa19.09■□□□□ 0.65
ACSF3-216ENST00000562204 PTCH1Q13635 1447 aa19.09■□□□□ 0.65
ACSF3-216ENST00000562204 USP21Q9UK80 565 aa19.09■□□□□ 0.65
ACSF3-216ENST00000562204 COL22A1Q8NFW1 1626 aaPredicted RBP19.09■□□□□ 0.65
ACSF3-216ENST00000562204 TRPC5Q9UL62 973 aaPredicted RBP19.08■□□□□ 0.64
ACSF3-216ENST00000562204 ROCK1Q13464 1354 aa19.06■□□□□ 0.64
ACSF3-216ENST00000562204 MARF1Q9Y4F3 1742 aaKnown RBP19.05■□□□□ 0.64
ACSF3-216ENST00000562204 NEXMIFQ5QGS0 1516 aa19.05■□□□□ 0.64
ACSF3-216ENST00000562204 SOS2Q07890 1332 aaPredicted RBP19.03■□□□□ 0.64
ACSF3-216ENST00000562204 FNBP4Q8N3X1 1017 aaPredicted RBP19.03■□□□□ 0.64
ACSF3-216ENST00000562204 NUP155O75694 1391 aa19.03■□□□□ 0.64
ACSF3-216ENST00000562204 ZNF326Q5BKZ1 582 aaKnown RBP19.02■□□□□ 0.64
ACSF3-216ENST00000562204 MYOM2P54296 1465 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms