RNA–Protein interactions for RNA: ENST00000561212.5

ZEB1-222, Transcript of zinc finger E-box binding homeobox 1, human

TSL 5

Gene ZEB1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-222	ENST00000561212	CNTLN	Q9NXG0	1405 aa		10.49	□□□□□ -0.73
ZEB1-222	ENST00000561212	SYNM	O15061	1565 aa		10.48	□□□□□ -0.73
ZEB1-222	ENST00000561212	UGGT1	Q9NYU2	1555 aa		10.48	□□□□□ -0.73
ZEB1-222	ENST00000561212	WASHC2C	Q9Y4E1	1318 aa		10.48	□□□□□ -0.73
ZEB1-222	ENST00000561212	ATXN8OS	P0DMR3	200 aa		10.48	□□□□□ -0.73
ZEB1-222	ENST00000561212	PRAG1	Q86YV5	1406 aa		10.47	□□□□□ -0.73
ZEB1-222	ENST00000561212	RALGAPB	Q86X10	1494 aa		10.46	□□□□□ -0.73
ZEB1-222	ENST00000561212	CFAP65	Q6ZU64	1925 aa	Known RBP	10.46	□□□□□ -0.73
ZEB1-222	ENST00000561212	PIP4P2	Q8N4L2	257 aa		10.46	□□□□□ -0.74
ZEB1-222	ENST00000561212	ADGRB3	O60242	1522 aa		10.46	□□□□□ -0.74
ZEB1-222	ENST00000561212	PREX1	Q8TCU6	1659 aa		10.46	□□□□□ -0.74
ZEB1-222	ENST00000561212	IFT172	Q9UG01	1749 aa		10.46	□□□□□ -0.74
ZEB1-222	ENST00000561212	TRPM1	Q7Z4N2	1603 aa		10.45	□□□□□ -0.74
ZEB1-222	ENST00000561212	KIF1B	O60333	1816 aa		10.44	□□□□□ -0.74
ZEB1-222	ENST00000561212	MROH2A	A6NES4	1674 aa		10.44	□□□□□ -0.74
ZEB1-222	ENST00000561212	GPRASP1	Q5JY77	1395 aa		10.44	□□□□□ -0.74
ZEB1-222	ENST00000561212	DCAF11	Q8TEB1	546 aa		10.44	□□□□□ -0.74
ZEB1-222	ENST00000561212	STAC3	Q96MF2	364 aa		10.44	□□□□□ -0.74
ZEB1-222	ENST00000561212	CLTC	Q00610	1675 aa	Known RBP	10.44	□□□□□ -0.74
ZEB1-222	ENST00000561212	NRXN1	Q9ULB1	1477 aa		10.44	□□□□□ -0.74
ZEB1-222	ENST00000561212	LHX8	Q68G74	356 aa		10.43	□□□□□ -0.74
ZEB1-222	ENST00000561212	MADD	Q8WXG6	1647 aa		10.43	□□□□□ -0.74
ZEB1-222	ENST00000561212	SPATA31D1	Q6ZQQ2	1576 aa		10.43	□□□□□ -0.74
ZEB1-222	ENST00000561212	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
ZEB1-222	ENST00000561212	DDX10	Q13206	875 aa	Known RBP	10.43	□□□□□ -0.74
ZEB1-222	ENST00000561212	RGL3	Q3MIN7	710 aa		10.43	□□□□□ -0.74
ZEB1-222	ENST00000561212	ERVK-7	P63135	1459 aa		10.42	□□□□□ -0.74
ZEB1-222	ENST00000561212	REM2	Q8IYK8	340 aa	Predicted RBP	10.42	□□□□□ -0.74
ZEB1-222	ENST00000561212	YTHDC1	Q96MU7	727 aa	Known RBP	10.42	□□□□□ -0.74
ZEB1-222	ENST00000561212	LAMC1	P11047	1609 aa		10.42	□□□□□ -0.74
ZEB1-222	ENST00000561212	MYOM2	P54296	1465 aa		10.41	□□□□□ -0.74
ZEB1-222	ENST00000561212	HSPA5	P11021	654 aa	Known RBP	10.41	□□□□□ -0.74
ZEB1-222	ENST00000561212	TMEM131L	A2VDJ0	1609 aa		10.4	□□□□□ -0.74
ZEB1-222	ENST00000561212	PPL	O60437	1756 aa		10.4	□□□□□ -0.74
ZEB1-222	ENST00000561212	IDI1	Q13907	227 aa		10.4	□□□□□ -0.74
ZEB1-222	ENST00000561212	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.4	□□□□□ -0.74
ZEB1-222	ENST00000561212	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.4	□□□□□ -0.74
ZEB1-222	ENST00000561212	SLC52A1	Q9NWF4	448 aa		10.4	□□□□□ -0.74
ZEB1-222	ENST00000561212	KIAA1210	Q9ULL0	1709 aa		10.39	□□□□□ -0.75
ZEB1-222	ENST00000561212	KDM2A	Q9Y2K7	1162 aa		10.39	□□□□□ -0.75
ZEB1-222	ENST00000561212	ZMYM3	Q14202	1370 aa		10.39	□□□□□ -0.75
ZEB1-222	ENST00000561212	CCER2	I3L3R5	266 aa		10.38	□□□□□ -0.75
ZEB1-222	ENST00000561212	NBPF1	Q3BBV0	1214 aa		10.38	□□□□□ -0.75
ZEB1-222	ENST00000561212	C11orf95	C9JLR9	678 aa	Predicted RBP	10.38	□□□□□ -0.75
ZEB1-222	ENST00000561212	NEXMIF	Q5QGS0	1516 aa		10.37	□□□□□ -0.75
ZEB1-222	ENST00000561212	WASHC2A	Q641Q2	1341 aa		10.37	□□□□□ -0.75
ZEB1-222	ENST00000561212	RPGRIP1L	Q68CZ1	1315 aa		10.37	□□□□□ -0.75
ZEB1-222	ENST00000561212	ZFYVE9	O95405	1425 aa		10.37	□□□□□ -0.75
ZEB1-222	ENST00000561212	MYO5B	Q9ULV0	1848 aa		10.37	□□□□□ -0.75
ZEB1-222	ENST00000561212	USP47	Q96K76	1375 aa		10.37	□□□□□ -0.75
ZEB1-222	ENST00000561212	POLR1A	O95602	1720 aa	Predicted RBP	10.36	□□□□□ -0.75
ZEB1-222	ENST00000561212	ANP32C	O43423	234 aa		10.36	□□□□□ -0.75
ZEB1-222	ENST00000561212	ADGRF5	Q8IZF2	1346 aa		10.35	□□□□□ -0.75
ZEB1-222	ENST00000561212	PIK3C2G	O75747	1445 aa		10.35	□□□□□ -0.75
ZEB1-222	ENST00000561212	EVX2	Q03828	476 aa		10.35	□□□□□ -0.75
ZEB1-222	ENST00000561212	MLEC	Q14165	292 aa		10.35	□□□□□ -0.75
ZEB1-222	ENST00000561212	ZNF326	Q5BKZ1	582 aa	Known RBP	10.35	□□□□□ -0.75
ZEB1-222	ENST00000561212	CCDC7	Q96M83	1385 aa		10.35	□□□□□ -0.75
ZEB1-222	ENST00000561212	IQGAP1	P46940	1657 aa		10.35	□□□□□ -0.75
ZEB1-222	ENST00000561212	GTF3C3	Q9Y5Q9	886 aa		10.34	□□□□□ -0.75
ZEB1-222	ENST00000561212	ROCK2	O75116	1388 aa	Known RBP	10.34	□□□□□ -0.75
ZEB1-222	ENST00000561212	KDM5A	P29375	1690 aa	Known RBP	10.34	□□□□□ -0.75
ZEB1-222	ENST00000561212	C3	P01024	1663 aa		10.34	□□□□□ -0.75
ZEB1-222	ENST00000561212	A2ML1	A8K2U0	1454 aa		10.33	□□□□□ -0.76
ZEB1-222	ENST00000561212	CARD11	Q9BXL7	1154 aa		10.33	□□□□□ -0.76
ZEB1-222	ENST00000561212	ADGRB1	O14514	1584 aa		10.33	□□□□□ -0.76
ZEB1-222	ENST00000561212	SETBP1	Q9Y6X0	1596 aa		10.33	□□□□□ -0.76
ZEB1-222	ENST00000561212	FER1L4	A9Z1Z3	1794 aa		10.32	□□□□□ -0.76
ZEB1-222	ENST00000561212	ADAMTSL3	P82987	1691 aa		10.32	□□□□□ -0.76
ZEB1-222	ENST00000561212	TESK2	Q96S53	571 aa		10.32	□□□□□ -0.76
ZEB1-222	ENST00000561212	C14orf93	Q9H972	538 aa	Known RBP	10.32	□□□□□ -0.76
ZEB1-222	ENST00000561212	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.31	□□□□□ -0.76
ZEB1-222	ENST00000561212	ST20-MTHFS	A0A0A6YYL1	179 aa		10.31	□□□□□ -0.76
ZEB1-222	ENST00000561212	KIF7	Q2M1P5	1343 aa		10.31	□□□□□ -0.76
ZEB1-222	ENST00000561212	PITPNM1	O00562	1244 aa		10.3	□□□□□ -0.76
ZEB1-222	ENST00000561212	CFAP70	Q5T0N1	1121 aa		10.3	□□□□□ -0.76
ZEB1-222	ENST00000561212	TNR	Q92752	1358 aa		10.3	□□□□□ -0.76
ZEB1-222	ENST00000561212	UBR1	Q8IWV7	1749 aa		10.3	□□□□□ -0.76
ZEB1-222	ENST00000561212	SCAF11	Q99590	1463 aa	Known RBP	10.29	□□□□□ -0.76
ZEB1-222	ENST00000561212	VGF	O15240	615 aa	Predicted RBP	10.28	□□□□□ -0.76
ZEB1-222	ENST00000561212	ASXL1	Q8IXJ9	1541 aa		10.28	□□□□□ -0.76
ZEB1-222	ENST00000561212	MYO3A	Q8NEV4	1616 aa		10.28	□□□□□ -0.76
ZEB1-222	ENST00000561212	NLRP1	Q9C000	1473 aa		10.28	□□□□□ -0.76
ZEB1-222	ENST00000561212	SPDYE2B	A6NHP3	402 aa		10.28	□□□□□ -0.76
ZEB1-222	ENST00000561212	SPDYE6	P0CI01	402 aa		10.28	□□□□□ -0.76
ZEB1-222	ENST00000561212	SPDYE2	Q495Y8	402 aa		10.28	□□□□□ -0.76
ZEB1-222	ENST00000561212	SETD1A	O15047	1707 aa	Known RBP	10.27	□□□□□ -0.77
ZEB1-222	ENST00000561212	CHGA	P10645	457 aa	Known RBP	10.27	□□□□□ -0.77
ZEB1-222	ENST00000561212	CEBPA	P49715	358 aa	Predicted RBP	10.27	□□□□□ -0.77
ZEB1-222	ENST00000561212	ESF1	Q9H501	851 aa	Known RBP	10.27	□□□□□ -0.77
ZEB1-222	ENST00000561212	NRXN3	Q9Y4C0	1643 aa		10.26	□□□□□ -0.77
ZEB1-222	ENST00000561212	SBNO2	Q9Y2G9	1366 aa		10.25	□□□□□ -0.77
ZEB1-222	ENST00000561212	RIMS2	Q9UQ26	1411 aa		10.25	□□□□□ -0.77
ZEB1-222	ENST00000561212	PTPRM	P28827	1452 aa		10.25	□□□□□ -0.77
ZEB1-222	ENST00000561212	ARHGAP23	Q9P227	1491 aa		10.25	□□□□□ -0.77
ZEB1-222	ENST00000561212	DISP3	Q9P2K9	1392 aa		10.24	□□□□□ -0.77
ZEB1-222	ENST00000561212	TMEM2	Q9UHN6	1383 aa		10.24	□□□□□ -0.77
ZEB1-222	ENST00000561212	ALK	Q9UM73	1620 aa		10.24	□□□□□ -0.77
ZEB1-222	ENST00000561212	RIMS1	Q86UR5	1692 aa	Known RBP	10.24	□□□□□ -0.77
ZEB1-222	ENST00000561212	SLIT1	O75093	1534 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms