RNA–Protein interactions for RNA: ENST00000561140.1

AC013489.1-201, humanhuman

TSL 3 BASIC

Gene AC013489.1, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013489.1-201ENST00000561140 KDM5AP29375 1690 aaKnown RBP11.75□□□□□ -0.53
AC013489.1-201ENST00000561140 CEP152O94986 1710 aa11.74□□□□□ -0.53
AC013489.1-201ENST00000561140 SLAIN2Q9P270 581 aa11.74□□□□□ -0.53
AC013489.1-201ENST00000561140 NCOA3Q9Y6Q9 1424 aa11.74□□□□□ -0.53
AC013489.1-201ENST00000561140 STRCP1A6NGW2 1772 aa11.74□□□□□ -0.53
AC013489.1-201ENST00000561140 TET3O43151 1660 aa11.73□□□□□ -0.53
AC013489.1-201ENST00000561140 PPP1R15AO75807 674 aaPredicted RBP11.73□□□□□ -0.53
AC013489.1-201ENST00000561140 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
AC013489.1-201ENST00000561140 RGS17Q9UGC6 210 aaPredicted RBP11.73□□□□□ -0.53
AC013489.1-201ENST00000561140 PLEKHG1Q9ULL1 1385 aa11.73□□□□□ -0.53
AC013489.1-201ENST00000561140 MSH6P52701 1360 aa11.72□□□□□ -0.53
AC013489.1-201ENST00000561140 PIK3C2BO00750 1634 aa11.71□□□□□ -0.53
AC013489.1-201ENST00000561140 NKTRP30414 1462 aaKnown RBP11.71□□□□□ -0.53
AC013489.1-201ENST00000561140 CROCC2H7BZ55 1655 aa11.71□□□□□ -0.54
AC013489.1-201ENST00000561140 ROCK1Q13464 1354 aa11.7□□□□□ -0.54
AC013489.1-201ENST00000561140 ZFYVE9O95405 1425 aa11.69□□□□□ -0.54
AC013489.1-201ENST00000561140 RIMS2Q9UQ26 1411 aa11.69□□□□□ -0.54
AC013489.1-201ENST00000561140 PIK3R4Q99570 1358 aa11.69□□□□□ -0.54
AC013489.1-201ENST00000561140 C19orf44Q9H6X5 657 aa11.69□□□□□ -0.54
AC013489.1-201ENST00000561140 ADGRB3O60242 1522 aa11.69□□□□□ -0.54
AC013489.1-201ENST00000561140 CADPS2Q86UW7 1296 aa11.68□□□□□ -0.54
AC013489.1-201ENST00000561140 RBM33Q96EV2 1170 aaKnown RBP11.68□□□□□ -0.54
AC013489.1-201ENST00000561140 CHGAP10645 457 aaKnown RBP11.67□□□□□ -0.54
AC013489.1-201ENST00000561140 JCADQ9P266 1359 aa11.67□□□□□ -0.54
AC013489.1-201ENST00000561140 ATF3P18847 181 aa11.66□□□□□ -0.54
AC013489.1-201ENST00000561140 POTEAQ6S8J7 498 aa11.66□□□□□ -0.54
AC013489.1-201ENST00000561140 NUP155O75694 1391 aa11.65□□□□□ -0.55
AC013489.1-201ENST00000561140 NWD1Q149M9 1564 aa11.64□□□□□ -0.55
AC013489.1-201ENST00000561140 C14orf37Q86TY3 774 aa11.64□□□□□ -0.55
AC013489.1-201ENST00000561140 SPATA31A6Q5VVP1 1343 aa11.63□□□□□ -0.55
AC013489.1-201ENST00000561140 XIRP1Q702N8 1843 aaKnown RBP11.63□□□□□ -0.55
AC013489.1-201ENST00000561140 AMOTL2Q9Y2J4 779 aa11.63□□□□□ -0.55
AC013489.1-201ENST00000561140 ADAMTS13Q76LX8 1427 aa11.62□□□□□ -0.55
AC013489.1-201ENST00000561140 ZNF772Q68DY9 489 aaPredicted RBP11.61□□□□□ -0.55
AC013489.1-201ENST00000561140 TMEM131LA2VDJ0 1609 aa11.6□□□□□ -0.55
AC013489.1-201ENST00000561140 NUTM2DQ5VT03 806 aaPredicted RBP11.6□□□□□ -0.55
AC013489.1-201ENST00000561140 ROBO1Q9Y6N7 1651 aa11.59□□□□□ -0.55
AC013489.1-201ENST00000561140 NCBP3Q53F19 620 aaKnown RBP11.59□□□□□ -0.55
AC013489.1-201ENST00000561140 DIP2AQ14689 1571 aa11.58□□□□□ -0.55
AC013489.1-201ENST00000561140 CHD2O14647 1828 aaKnown RBP11.58□□□□□ -0.56
AC013489.1-201ENST00000561140 DCCP43146 1447 aa11.58□□□□□ -0.56
AC013489.1-201ENST00000561140 ITGAEP38570 1179 aa11.57□□□□□ -0.56
AC013489.1-201ENST00000561140 ZNF326Q5BKZ1 582 aaKnown RBP11.57□□□□□ -0.56
AC013489.1-201ENST00000561140 MEX3CQ5U5Q3 659 aaKnown RBP11.57□□□□□ -0.56
AC013489.1-201ENST00000561140 BRINP3Q76B58 766 aa11.57□□□□□ -0.56
AC013489.1-201ENST00000561140 LRRC59Q96AG4 307 aaKnown RBP11.57□□□□□ -0.56
AC013489.1-201ENST00000561140 UNC13BO14795 1591 aa11.57□□□□□ -0.56
AC013489.1-201ENST00000561140 GCC2Q8IWJ2 1684 aa11.55□□□□□ -0.56
AC013489.1-201ENST00000561140 VGFO15240 615 aaPredicted RBP11.55□□□□□ -0.56
AC013489.1-201ENST00000561140 TRPM2O94759 1503 aa11.55□□□□□ -0.56
AC013489.1-201ENST00000561140 PTPRUQ92729 1446 aa11.54□□□□□ -0.56
AC013489.1-201ENST00000561140 IQGAP3Q86VI3 1631 aa11.54□□□□□ -0.56
AC013489.1-201ENST00000561140 RXRBP28702 533 aa11.54□□□□□ -0.56
AC013489.1-201ENST00000561140 SETD1AO15047 1707 aaKnown RBP11.54□□□□□ -0.56
AC013489.1-201ENST00000561140 RPGRIP1LQ68CZ1 1315 aa11.53□□□□□ -0.56
AC013489.1-201ENST00000561140 PHLPP1O60346 1717 aa11.52□□□□□ -0.56
AC013489.1-201ENST00000561140 AHDC1Q5TGY3 1603 aaPredicted RBP11.52□□□□□ -0.57
AC013489.1-201ENST00000561140 E9PCH4 1651 aa11.52□□□□□ -0.57
AC013489.1-201ENST00000561140 SETD5Q9C0A6 1442 aa11.52□□□□□ -0.57
AC013489.1-201ENST00000561140 METP08581 1390 aa11.51□□□□□ -0.57
AC013489.1-201ENST00000561140 COL16A1Q07092 1604 aaPredicted RBP11.5□□□□□ -0.57
AC013489.1-201ENST00000561140 UPF1Q92900 1129 aaKnown RBP eCLIP11.5□□□□□ -0.57
AC013489.1-201ENST00000561140 SETBP1Q9Y6X0 1596 aa11.5□□□□□ -0.57
AC013489.1-201ENST00000561140 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.49□□□□□ -0.57
AC013489.1-201ENST00000561140 MYO5BQ9ULV0 1848 aa11.49□□□□□ -0.57
AC013489.1-201ENST00000561140 NUTM2BA6NNL0 878 aaPredicted RBP11.49□□□□□ -0.57
AC013489.1-201ENST00000561140 NUTM2EB1AL46 878 aaPredicted RBP11.49□□□□□ -0.57
AC013489.1-201ENST00000561140 NUTM2AQ8IVF1 878 aaPredicted RBP11.49□□□□□ -0.57
AC013489.1-201ENST00000561140 MST1RQ04912 1400 aa11.49□□□□□ -0.57
AC013489.1-201ENST00000561140 LRP6O75581 1613 aa11.47□□□□□ -0.57
AC013489.1-201ENST00000561140 CDK12Q9NYV4 1490 aaPredicted RBP11.47□□□□□ -0.57
AC013489.1-201ENST00000561140 ADGRL3Q9HAR2 1447 aa11.47□□□□□ -0.57
AC013489.1-201ENST00000561140 AFF2P51816 1311 aa11.47□□□□□ -0.57
AC013489.1-201ENST00000561140 RBM6P78332 1123 aaKnown RBP11.47□□□□□ -0.57
AC013489.1-201ENST00000561140 TRIM52Q96A61 297 aa11.47□□□□□ -0.57
AC013489.1-201ENST00000561140 QTRT2Q9H974 415 aaKnown RBP11.47□□□□□ -0.57
AC013489.1-201ENST00000561140 RRBP1Q9P2E9 1410 aaKnown RBP11.46□□□□□ -0.57
AC013489.1-201ENST00000561140 PPARGC1BQ86YN6 1023 aaKnown RBP11.46□□□□□ -0.57
AC013489.1-201ENST00000561140 NAIPQ13075 1403 aa11.45□□□□□ -0.58
AC013489.1-201ENST00000561140 ACIN1Q9UKV3 1341 aaKnown RBP11.45□□□□□ -0.58
AC013489.1-201ENST00000561140 NPM3O75607 178 aaKnown RBP11.45□□□□□ -0.58
AC013489.1-201ENST00000561140 NGLY1Q96IV0 654 aa11.45□□□□□ -0.58
AC013489.1-201ENST00000561140 ASXL1Q8IXJ9 1541 aa11.45□□□□□ -0.58
AC013489.1-201ENST00000561140 SOS2Q07890 1332 aaPredicted RBP11.44□□□□□ -0.58
AC013489.1-201ENST00000561140 SHPRHQ149N8 1683 aa11.44□□□□□ -0.58
AC013489.1-201ENST00000561140 C1orf167Q5SNV9 1468 aa11.44□□□□□ -0.58
AC013489.1-201ENST00000561140 PTCH1Q13635 1447 aa11.43□□□□□ -0.58
AC013489.1-201ENST00000561140 PRAG1Q86YV5 1406 aa11.43□□□□□ -0.58
AC013489.1-201ENST00000561140 PNPLA6Q8IY17 1366 aa11.43□□□□□ -0.58
AC013489.1-201ENST00000561140 C8orf37Q96NL8 207 aa11.43□□□□□ -0.58
AC013489.1-201ENST00000561140 XRN1Q8IZH2 1706 aaKnown RBP11.43□□□□□ -0.58
AC013489.1-201ENST00000561140 HFM1A2PYH4 1435 aa11.43□□□□□ -0.58
AC013489.1-201ENST00000561140 FNBP4Q8N3X1 1017 aaPredicted RBP11.42□□□□□ -0.58
AC013489.1-201ENST00000561140 DDX17Q92841 729 aaKnown RBP11.42□□□□□ -0.58
AC013489.1-201ENST00000561140 ORAI2Q96SN7 254 aa11.42□□□□□ -0.58
AC013489.1-201ENST00000561140 NRXN3Q9Y4C0 1643 aa11.42□□□□□ -0.58
AC013489.1-201ENST00000561140 ROBO2Q9HCK4 1378 aa11.41□□□□□ -0.58
AC013489.1-201ENST00000561140 NEXMIFQ5QGS0 1516 aa11.41□□□□□ -0.58
AC013489.1-201ENST00000561140 SPHKAPQ2M3C7 1700 aa11.4□□□□□ -0.58
AC013489.1-201ENST00000561140 NPHP3Q7Z494 1330 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms