RNA–Protein interactions for RNA: ENST00000561140.1

AC013489.1-201, humanhuman

TSL 3 BASIC

Gene AC013489.1, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013489.1-201ENST00000561140 NISCHQ9Y2I1 1504 aa19.03■□□□□ 0.64
AC013489.1-201ENST00000561140 ABCC9O60706 1549 aa17.14■□□□□ 0.33
AC013489.1-201ENST00000561140 CCDC180Q9P1Z9 1646 aa17.02■□□□□ 0.31
AC013489.1-201ENST00000561140 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
AC013489.1-201ENST00000561140 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
AC013489.1-201ENST00000561140 NACADO15069 1562 aa16.21■□□□□ 0.19
AC013489.1-201ENST00000561140 DCAF8L2P0C7V8 631 aa16.16■□□□□ 0.18
AC013489.1-201ENST00000561140 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
AC013489.1-201ENST00000561140 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.16
AC013489.1-201ENST00000561140 CHIC1Q5VXU3 224 aa15.93■□□□□ 0.14
AC013489.1-201ENST00000561140 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
AC013489.1-201ENST00000561140 DCAF1Q9Y4B6 1507 aa15.77■□□□□ 0.11
AC013489.1-201ENST00000561140 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
AC013489.1-201ENST00000561140 AEBP2Q6ZN18 517 aaPredicted RBP15.72■□□□□ 0.11
AC013489.1-201ENST00000561140 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.11
AC013489.1-201ENST00000561140 SHROOM4Q9ULL8 1493 aa15.71■□□□□ 0.1
AC013489.1-201ENST00000561140 CECR2Q9BXF3 1484 aa15.5■□□□□ 0.07
AC013489.1-201ENST00000561140 SCRIBQ14160 1630 aa15.45■□□□□ 0.06
AC013489.1-201ENST00000561140 CC2D2AQ9P2K1 1620 aa15.45■□□□□ 0.06
AC013489.1-201ENST00000561140 EIF4G1Q04637 1599 aaKnown RBP15.42■□□□□ 0.06
AC013489.1-201ENST00000561140 DNAJC5Q9H3Z4 198 aa15.38■□□□□ 0.05
AC013489.1-201ENST00000561140 NCAPD3P42695 1498 aa15.03■□□□□ -0
AC013489.1-201ENST00000561140 ATAD2BQ9ULI0 1458 aa14.92□□□□□ -0.02
AC013489.1-201ENST00000561140 CUX2O14529 1486 aa14.89□□□□□ -0.03
AC013489.1-201ENST00000561140 SMARCA2P51531 1590 aa14.86□□□□□ -0.03
AC013489.1-201ENST00000561140 ERCC6Q03468 1493 aa14.85□□□□□ -0.03
AC013489.1-201ENST00000561140 HMGXB3Q12766 1538 aa14.82□□□□□ -0.04
AC013489.1-201ENST00000561140 SMARCA4P51532 1647 aa14.78□□□□□ -0.04
AC013489.1-201ENST00000561140 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.05
AC013489.1-201ENST00000561140 BAZ1BQ9UIG0 1483 aaKnown RBP14.74□□□□□ -0.05
AC013489.1-201ENST00000561140 PEG3Q9GZU2 1588 aa14.71□□□□□ -0.05
AC013489.1-201ENST00000561140 NESP48681 1621 aa14.68□□□□□ -0.06
AC013489.1-201ENST00000561140 PDS5BQ9NTI5 1447 aa14.64□□□□□ -0.07
AC013489.1-201ENST00000561140 MROH2BQ7Z745 1585 aa14.61□□□□□ -0.07
AC013489.1-201ENST00000561140 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
AC013489.1-201ENST00000561140 CADPSQ9ULU8 1353 aa14.58□□□□□ -0.08
AC013489.1-201ENST00000561140 THOC2Q8NI27 1593 aaKnown RBP14.5□□□□□ -0.09
AC013489.1-201ENST00000561140 TRIM41Q8WV44 630 aa14.47□□□□□ -0.09
AC013489.1-201ENST00000561140 MRC2Q9UBG0 1479 aa14.43□□□□□ -0.1
AC013489.1-201ENST00000561140 KIF21AQ7Z4S6 1674 aa14.38□□□□□ -0.11
AC013489.1-201ENST00000561140 WIZO95785 1651 aa14.36□□□□□ -0.11
AC013489.1-201ENST00000561140 CFTRP13569 1480 aa14.36□□□□□ -0.11
AC013489.1-201ENST00000561140 WDR62O43379 1518 aa14.36□□□□□ -0.11
AC013489.1-201ENST00000561140 RSF1Q96T23 1441 aaPredicted RBP14.35□□□□□ -0.11
AC013489.1-201ENST00000561140 CEP164Q9UPV0 1460 aa14.34□□□□□ -0.11
AC013489.1-201ENST00000561140 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
AC013489.1-201ENST00000561140 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
AC013489.1-201ENST00000561140 TOP2AP11388 1531 aaKnown RBP14.25□□□□□ -0.13
AC013489.1-201ENST00000561140 URB2Q14146 1524 aaKnown RBP14.18□□□□□ -0.14
AC013489.1-201ENST00000561140 CCDC88BA6NC98 1476 aa14.13□□□□□ -0.15
AC013489.1-201ENST00000561140 PHF23Q9BUL5 403 aaPredicted RBP14.12□□□□□ -0.15
AC013489.1-201ENST00000561140 ABCC8Q09428 1581 aa14.11□□□□□ -0.15
AC013489.1-201ENST00000561140 IFT140Q96RY7 1462 aa14.11□□□□□ -0.15
AC013489.1-201ENST00000561140 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
AC013489.1-201ENST00000561140 ZNF608Q9ULD9 1512 aaPredicted RBP14.01□□□□□ -0.17
AC013489.1-201ENST00000561140 PRDM2Q13029 1718 aa13.98□□□□□ -0.17
AC013489.1-201ENST00000561140 DNMBPQ6XZF7 1577 aa13.95□□□□□ -0.18
AC013489.1-201ENST00000561140 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.188e-9■■■■■ 32
AC013489.1-201ENST00000561140 CYB5RLQ6IPT4 315 aa13.91□□□□□ -0.18
AC013489.1-201ENST00000561140 ARHGEF11O15085 1522 aa13.9□□□□□ -0.18
AC013489.1-201ENST00000561140 FBLN2P98095 1184 aa13.9□□□□□ -0.18
AC013489.1-201ENST00000561140 RIMBP3CA6NJZ7 1639 aa13.9□□□□□ -0.19
AC013489.1-201ENST00000561140 RIMBP3BA6NNM3 1639 aa13.9□□□□□ -0.19
AC013489.1-201ENST00000561140 RIMBP3Q9UFD9 1639 aa13.9□□□□□ -0.19
AC013489.1-201ENST00000561140 SOGA1O94964 1423 aa13.9□□□□□ -0.19
AC013489.1-201ENST00000561140 POLA1P09884 1462 aaPredicted RBP13.89□□□□□ -0.19
AC013489.1-201ENST00000561140 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
AC013489.1-201ENST00000561140 EIF4G3O43432 1585 aaKnown RBP13.86□□□□□ -0.19
AC013489.1-201ENST00000561140 TDRD9Q8NDG6 1382 aaKnown RBP13.85□□□□□ -0.19
AC013489.1-201ENST00000561140 CHMP7Q8WUX9 453 aaPredicted RBP13.83□□□□□ -0.2
AC013489.1-201ENST00000561140 RAD54L2Q9Y4B4 1467 aa13.82□□□□□ -0.2
AC013489.1-201ENST00000561140 WDR97A6NE52 1622 aa13.79□□□□□ -0.2
AC013489.1-201ENST00000561140 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.21
AC013489.1-201ENST00000561140 GRIN2BQ13224 1484 aa13.76□□□□□ -0.21
AC013489.1-201ENST00000561140 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
AC013489.1-201ENST00000561140 MAGI1Q96QZ7 1491 aaPredicted RBP13.76□□□□□ -0.21
AC013489.1-201ENST00000561140 ARAP1Q96P48 1450 aa13.75□□□□□ -0.21
AC013489.1-201ENST00000561140 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
AC013489.1-201ENST00000561140 CUX1P39880 1505 aa13.73□□□□□ -0.21
AC013489.1-201ENST00000561140 CHD1O14646 1710 aa13.72□□□□□ -0.21
AC013489.1-201ENST00000561140 SYNJ2O15056 1496 aa13.71□□□□□ -0.21
AC013489.1-201ENST00000561140 SYNJ1O43426 1573 aa13.69□□□□□ -0.22
AC013489.1-201ENST00000561140 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
AC013489.1-201ENST00000561140 SUPT5HO00267 1087 aaKnown RBP13.67□□□□□ -0.22
AC013489.1-201ENST00000561140 CLASP1Q7Z460 1538 aa13.67□□□□□ -0.22
AC013489.1-201ENST00000561140 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
AC013489.1-201ENST00000561140 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
AC013489.1-201ENST00000561140 SENP3Q9H4L4 574 aaPredicted RBP13.55□□□□□ -0.24
AC013489.1-201ENST00000561140 FHAD1B1AJZ9 1412 aa13.55□□□□□ -0.24
AC013489.1-201ENST00000561140 GRIN2AQ12879 1464 aa13.55□□□□□ -0.24
AC013489.1-201ENST00000561140 ABCA5Q8WWZ7 1642 aa13.54□□□□□ -0.24
AC013489.1-201ENST00000561140 NUP160Q12769 1436 aa13.54□□□□□ -0.24
AC013489.1-201ENST00000561140 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
AC013489.1-201ENST00000561140 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
AC013489.1-201ENST00000561140 JPH4Q96JJ6 628 aa13.49□□□□□ -0.25
AC013489.1-201ENST00000561140 ERICH3Q5RHP9 1530 aa13.48□□□□□ -0.25
AC013489.1-201ENST00000561140 BIVM-ERCC5R4GMW8 1640 aa13.45□□□□□ -0.26
AC013489.1-201ENST00000561140 ADAMTS12P58397 1594 aa13.45□□□□□ -0.26
AC013489.1-201ENST00000561140 CEP170Q5SW79 1584 aa13.43□□□□□ -0.26
AC013489.1-201ENST00000561140 PRG4Q92954 1404 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms