RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
AC087878.1-201ENST00000560709 PPLO60437 1756 aa16.59■□□□□ 0.25
AC087878.1-201ENST00000560709 TNRQ92752 1358 aa16.59■□□□□ 0.25
AC087878.1-201ENST00000560709 KDM5AP29375 1690 aaKnown RBP16.59■□□□□ 0.25
AC087878.1-201ENST00000560709 FBXO31Q5XUX0 539 aaPredicted RBP16.58■□□□□ 0.24
AC087878.1-201ENST00000560709 NLRP1Q9C000 1473 aa16.58■□□□□ 0.24
AC087878.1-201ENST00000560709 NEXMIFQ5QGS0 1516 aa16.58■□□□□ 0.24
AC087878.1-201ENST00000560709 CFAP65Q6ZU64 1925 aaKnown RBP16.58■□□□□ 0.24
AC087878.1-201ENST00000560709 FER1L4A9Z1Z3 1794 aa16.57■□□□□ 0.24
AC087878.1-201ENST00000560709 PIK3C2GO75747 1445 aa16.57■□□□□ 0.24
AC087878.1-201ENST00000560709 EIF3AQ14152 1382 aaKnown RBP16.56■□□□□ 0.24
AC087878.1-201ENST00000560709 STAG3Q9UJ98 1225 aa16.56■□□□□ 0.24
AC087878.1-201ENST00000560709 SETBP1Q9Y6X0 1596 aa16.55■□□□□ 0.24
AC087878.1-201ENST00000560709 SLC24A1O60721 1099 aa16.55■□□□□ 0.24
AC087878.1-201ENST00000560709 SCAF11Q99590 1463 aaKnown RBP16.54■□□□□ 0.24
AC087878.1-201ENST00000560709 HDGFP51858 240 aaKnown RBP16.54■□□□□ 0.24
AC087878.1-201ENST00000560709 A2ML1A8K2U0 1454 aa16.54■□□□□ 0.24
AC087878.1-201ENST00000560709 ADGRF5Q8IZF2 1346 aa16.53■□□□□ 0.24
AC087878.1-201ENST00000560709 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
AC087878.1-201ENST00000560709 POLR1AO95602 1720 aaPredicted RBP16.51■□□□□ 0.23
AC087878.1-201ENST00000560709 NBPF1Q3BBV0 1214 aa16.51■□□□□ 0.23
AC087878.1-201ENST00000560709 C14orf93Q9H972 538 aaKnown RBP16.51■□□□□ 0.23
AC087878.1-201ENST00000560709 CCDC7Q96M83 1385 aa16.51■□□□□ 0.23
AC087878.1-201ENST00000560709 C3P01024 1663 aa16.5■□□□□ 0.23
AC087878.1-201ENST00000560709 HIRIP3Q9BW71 556 aaPredicted RBP16.5■□□□□ 0.23
AC087878.1-201ENST00000560709 IQGAP1P46940 1657 aa16.5■□□□□ 0.23
AC087878.1-201ENST00000560709 ADAMTSL3P82987 1691 aa16.49■□□□□ 0.23
AC087878.1-201ENST00000560709 WASHC2AQ641Q2 1341 aa16.48■□□□□ 0.23
AC087878.1-201ENST00000560709 RIMS2Q9UQ26 1411 aa16.48■□□□□ 0.23
AC087878.1-201ENST00000560709 ST20-MTHFSA0A0A6YYL1 179 aa16.48■□□□□ 0.23
AC087878.1-201ENST00000560709 CFAP70Q5T0N1 1121 aa16.47■□□□□ 0.23
AC087878.1-201ENST00000560709 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
AC087878.1-201ENST00000560709 MSH5O43196 834 aa16.45■□□□□ 0.22
AC087878.1-201ENST00000560709 DDX10Q13206 875 aaKnown RBP16.45■□□□□ 0.22
AC087878.1-201ENST00000560709 CDCA8Q53HL2 280 aa16.45■□□□□ 0.22
AC087878.1-201ENST00000560709 ADGRB1O14514 1584 aa16.45■□□□□ 0.22
AC087878.1-201ENST00000560709 MYO5BQ9ULV0 1848 aa16.45■□□□□ 0.22
AC087878.1-201ENST00000560709 TMEM2Q9UHN6 1383 aa16.44■□□□□ 0.22
AC087878.1-201ENST00000560709 SBNO2Q9Y2G9 1366 aa16.44■□□□□ 0.22
AC087878.1-201ENST00000560709 TMF1P82094 1093 aa16.44■□□□□ 0.22
AC087878.1-201ENST00000560709 UBR1Q8IWV7 1749 aa16.44■□□□□ 0.22
AC087878.1-201ENST00000560709 RIMS1Q86UR5 1692 aaKnown RBP16.43■□□□□ 0.22
AC087878.1-201ENST00000560709 MYO3AQ8NEV4 1616 aa16.42■□□□□ 0.22
AC087878.1-201ENST00000560709 TESK2Q96S53 571 aa16.41■□□□□ 0.22
AC087878.1-201ENST00000560709 SLIT1O75093 1534 aa16.4■□□□□ 0.22
AC087878.1-201ENST00000560709 CEBPAP49715 358 aaPredicted RBP16.4■□□□□ 0.22
AC087878.1-201ENST00000560709 THEMISQ8N1K5 641 aaPredicted RBP16.4■□□□□ 0.22
AC087878.1-201ENST00000560709 C11orf95C9JLR9 678 aaPredicted RBP16.39■□□□□ 0.21
AC087878.1-201ENST00000560709 ARHGAP23Q9P227 1491 aa16.39■□□□□ 0.21
AC087878.1-201ENST00000560709 ALKQ9UM73 1620 aa16.38■□□□□ 0.21
AC087878.1-201ENST00000560709 ANP32CO43423 234 aa16.38■□□□□ 0.21
AC087878.1-201ENST00000560709 EID1Q9Y6B2 187 aa16.38■□□□□ 0.21
AC087878.1-201ENST00000560709 MIER1Q8N108 512 aa16.37■□□□□ 0.21
AC087878.1-201ENST00000560709 CEP170BQ9Y4F5 1589 aaPredicted RBP16.37■□□□□ 0.21
AC087878.1-201ENST00000560709 CENPJQ9HC77 1338 aaPredicted RBP16.37■□□□□ 0.21
AC087878.1-201ENST00000560709 PLEKHG1Q9ULL1 1385 aa16.37■□□□□ 0.21
AC087878.1-201ENST00000560709 ZNF142P52746 1687 aaPredicted RBP16.36■□□□□ 0.21
AC087878.1-201ENST00000560709 NUTM2DQ5VT03 806 aaPredicted RBP16.35■□□□□ 0.21
AC087878.1-201ENST00000560709 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
AC087878.1-201ENST00000560709 YTHDC2Q9H6S0 1430 aaKnown RBP16.34■□□□□ 0.21
AC087878.1-201ENST00000560709 ASXL1Q8IXJ9 1541 aa16.34■□□□□ 0.21
AC087878.1-201ENST00000560709 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.2
AC087878.1-201ENST00000560709 LRPPRCP42704 1394 aaKnown RBP16.33■□□□□ 0.2
AC087878.1-201ENST00000560709 PTPRMP28827 1452 aa16.33■□□□□ 0.2
AC087878.1-201ENST00000560709 SETD1BQ9UPS6 1966 aaKnown RBP16.33■□□□□ 0.2
AC087878.1-201ENST00000560709 DIP2AQ14689 1571 aa16.32■□□□□ 0.2
AC087878.1-201ENST00000560709 DISP3Q9P2K9 1392 aa16.32■□□□□ 0.2
AC087878.1-201ENST00000560709 NRXN3Q9Y4C0 1643 aa16.31■□□□□ 0.2
AC087878.1-201ENST00000560709 TRAK1Q9UPV9 953 aa16.31■□□□□ 0.2
AC087878.1-201ENST00000560709 ARHGEF28Q8N1W1 1705 aaKnown RBP16.31■□□□□ 0.2
AC087878.1-201ENST00000560709 ABCC11Q96J66 1382 aa16.3■□□□□ 0.2
AC087878.1-201ENST00000560709 CCER2I3L3R5 266 aa16.3■□□□□ 0.2
AC087878.1-201ENST00000560709 TMEM132EQ6IEE7 984 aa16.3■□□□□ 0.2
AC087878.1-201ENST00000560709 TXNDC2Q86VQ3 553 aa16.3■□□□□ 0.2
AC087878.1-201ENST00000560709 SIRT1Q96EB6 747 aa16.3■□□□□ 0.2
AC087878.1-201ENST00000560709 SETD1AO15047 1707 aaKnown RBP16.3■□□□□ 0.2
AC087878.1-201ENST00000560709 KTN1Q86UP2 1357 aaKnown RBP16.29■□□□□ 0.2
AC087878.1-201ENST00000560709 POLR3GLQ9BT43 218 aa16.29■□□□□ 0.2
AC087878.1-201ENST00000560709 TECPR2O15040 1411 aa16.28■□□□□ 0.2
AC087878.1-201ENST00000560709 QRICH2Q9H0J4 1663 aa16.28■□□□□ 0.2
AC087878.1-201ENST00000560709 EVC2Q86UK5 1308 aa16.27■□□□□ 0.2
AC087878.1-201ENST00000560709 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.2
AC087878.1-201ENST00000560709 KNDC1Q76NI1 1749 aa16.27■□□□□ 0.19
AC087878.1-201ENST00000560709 FAM135BQ49AJ0 1406 aa16.27■□□□□ 0.19
AC087878.1-201ENST00000560709 ADAMTS13Q76LX8 1427 aa16.27■□□□□ 0.19
AC087878.1-201ENST00000560709 MED14O60244 1454 aa16.26■□□□□ 0.19
AC087878.1-201ENST00000560709 PIK3R4Q99570 1358 aa16.26■□□□□ 0.19
AC087878.1-201ENST00000560709 NINLQ9Y2I6 1382 aa16.26■□□□□ 0.19
AC087878.1-201ENST00000560709 LTKP29376 864 aa16.25■□□□□ 0.19
AC087878.1-201ENST00000560709 BCANQ96GW7 911 aa16.25■□□□□ 0.19
AC087878.1-201ENST00000560709 TBX22Q9Y458 520 aa16.25■□□□□ 0.19
AC087878.1-201ENST00000560709 CPS1P31327 1500 aa16.24■□□□□ 0.19
AC087878.1-201ENST00000560709 ANKLE2Q86XL3 938 aa16.24■□□□□ 0.19
AC087878.1-201ENST00000560709 POGKQ9P215 609 aa16.24■□□□□ 0.19
AC087878.1-201ENST00000560709 CENPBP07199 599 aaPredicted RBP16.23■□□□□ 0.19
AC087878.1-201ENST00000560709 METP08581 1390 aa16.23■□□□□ 0.19
AC087878.1-201ENST00000560709 STK26Q9P289 416 aa16.22■□□□□ 0.19
AC087878.1-201ENST00000560709 PRAM1Q96QH2 718 aa16.21■□□□□ 0.19
AC087878.1-201ENST00000560709 PRKRIP1Q9H875 184 aaPredicted RBP16.21■□□□□ 0.19
AC087878.1-201ENST00000560709 ATAD2Q6PL18 1390 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms