RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 MLECQ14165 292 aa20.26■□□□□ 0.83
ZEB1-218ENST00000560196 NBPF1Q3BBV0 1214 aa20.26■□□□□ 0.83
ZEB1-218ENST00000560196 ESF1Q9H501 851 aaKnown RBP20.26■□□□□ 0.83
ZEB1-218ENST00000560196 ZMYM3Q14202 1370 aa20.25■□□□□ 0.83
ZEB1-218ENST00000560196 MIER1Q8N108 512 aa20.25■□□□□ 0.83
ZEB1-218ENST00000560196 CHGAP10645 457 aaKnown RBP20.24■□□□□ 0.83
ZEB1-218ENST00000560196 FBXO31Q5XUX0 539 aaPredicted RBP20.24■□□□□ 0.83
ZEB1-218ENST00000560196 ZFYVE9O95405 1425 aa20.24■□□□□ 0.83
ZEB1-218ENST00000560196 TMEM131LA2VDJ0 1609 aa20.24■□□□□ 0.83
ZEB1-218ENST00000560196 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
ZEB1-218ENST00000560196 ADGRF5Q8IZF2 1346 aa20.22■□□□□ 0.83
ZEB1-218ENST00000560196 C11orf95C9JLR9 678 aaPredicted RBP20.21■□□□□ 0.83
ZEB1-218ENST00000560196 PIK3C2GO75747 1445 aa20.2■□□□□ 0.82
ZEB1-218ENST00000560196 KIF7Q2M1P5 1343 aa20.2■□□□□ 0.82
ZEB1-218ENST00000560196 IQGAP1P46940 1657 aa20.19■□□□□ 0.82
ZEB1-218ENST00000560196 ST20-MTHFSA0A0A6YYL1 179 aa20.19■□□□□ 0.82
ZEB1-218ENST00000560196 VGFO15240 615 aaPredicted RBP20.19■□□□□ 0.82
ZEB1-218ENST00000560196 SETBP1Q9Y6X0 1596 aa20.19■□□□□ 0.82
ZEB1-218ENST00000560196 SCAF11Q99590 1463 aaKnown RBP20.18■□□□□ 0.82
ZEB1-218ENST00000560196 C14orf93Q9H972 538 aaKnown RBP20.16■□□□□ 0.82
ZEB1-218ENST00000560196 TNRQ92752 1358 aa20.15■□□□□ 0.82
ZEB1-218ENST00000560196 A2ML1A8K2U0 1454 aa20.14■□□□□ 0.81
ZEB1-218ENST00000560196 CFAP70Q5T0N1 1121 aa20.14■□□□□ 0.81
ZEB1-218ENST00000560196 KDM5AP29375 1690 aaKnown RBP20.13■□□□□ 0.81
ZEB1-218ENST00000560196 EIF3AQ14152 1382 aaKnown RBP20.12■□□□□ 0.81
ZEB1-218ENST00000560196 MYO5BQ9ULV0 1848 aa20.12■□□□□ 0.81
ZEB1-218ENST00000560196 TESK2Q96S53 571 aa20.12■□□□□ 0.81
ZEB1-218ENST00000560196 ADGRB1O14514 1584 aa20.1■□□□□ 0.81
ZEB1-218ENST00000560196 FER1L4A9Z1Z3 1794 aa20.1■□□□□ 0.81
ZEB1-218ENST00000560196 SLC24A1O60721 1099 aa20.09■□□□□ 0.81
ZEB1-218ENST00000560196 STAG3Q9UJ98 1225 aa20.09■□□□□ 0.81
ZEB1-218ENST00000560196 NLRP1Q9C000 1473 aa20.09■□□□□ 0.81
ZEB1-218ENST00000560196 ANP32CO43423 234 aa20.08■□□□□ 0.81
ZEB1-218ENST00000560196 TMF1P82094 1093 aa20.06■□□□□ 0.8
ZEB1-218ENST00000560196 RIMS2Q9UQ26 1411 aa20.06■□□□□ 0.8
ZEB1-218ENST00000560196 C3P01024 1663 aa20.06■□□□□ 0.8
ZEB1-218ENST00000560196 MYO3AQ8NEV4 1616 aa20.05■□□□□ 0.8
ZEB1-218ENST00000560196 SBNO2Q9Y2G9 1366 aa20.05■□□□□ 0.8
ZEB1-218ENST00000560196 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.04■□□□□ 0.8
ZEB1-218ENST00000560196 CCER2I3L3R5 266 aa20.03■□□□□ 0.8
ZEB1-218ENST00000560196 HDGFP51858 240 aaKnown RBP20.02■□□□□ 0.8
ZEB1-218ENST00000560196 DISP3Q9P2K9 1392 aa20.02■□□□□ 0.8
ZEB1-218ENST00000560196 CDCA8Q53HL2 280 aa20.01■□□□□ 0.79
ZEB1-218ENST00000560196 UBR1Q8IWV7 1749 aa20.01■□□□□ 0.79
ZEB1-218ENST00000560196 ADAMTSL3P82987 1691 aa20■□□□□ 0.79
ZEB1-218ENST00000560196 NUTM2DQ5VT03 806 aaPredicted RBP19.99■□□□□ 0.79
ZEB1-218ENST00000560196 ALKQ9UM73 1620 aa19.98■□□□□ 0.79
ZEB1-218ENST00000560196 TMEM2Q9UHN6 1383 aa19.98■□□□□ 0.79
ZEB1-218ENST00000560196 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
ZEB1-218ENST00000560196 CEBPAP49715 358 aaPredicted RBP19.98■□□□□ 0.79
ZEB1-218ENST00000560196 CENPJQ9HC77 1338 aaPredicted RBP19.97■□□□□ 0.79
ZEB1-218ENST00000560196 TMEM132EQ6IEE7 984 aa19.95■□□□□ 0.78
ZEB1-218ENST00000560196 POLR3GLQ9BT43 218 aa19.95■□□□□ 0.78
ZEB1-218ENST00000560196 RIMS1Q86UR5 1692 aaKnown RBP19.94■□□□□ 0.78
ZEB1-218ENST00000560196 ARHGAP23Q9P227 1491 aa19.93■□□□□ 0.78
ZEB1-218ENST00000560196 SLIT1O75093 1534 aa19.93■□□□□ 0.78
ZEB1-218ENST00000560196 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
ZEB1-218ENST00000560196 ARHGEF28Q8N1W1 1705 aaKnown RBP19.93■□□□□ 0.78
ZEB1-218ENST00000560196 PRKRIP1Q9H875 184 aaPredicted RBP19.92■□□□□ 0.78
ZEB1-218ENST00000560196 SETD1AO15047 1707 aaKnown RBP19.92■□□□□ 0.78
ZEB1-218ENST00000560196 YTHDC2Q9H6S0 1430 aaKnown RBP19.92■□□□□ 0.78
ZEB1-218ENST00000560196 NRXN3Q9Y4C0 1643 aa19.91■□□□□ 0.78
ZEB1-218ENST00000560196 PUS7Q96PZ0 661 aaKnown RBP19.91■□□□□ 0.78
ZEB1-218ENST00000560196 PTPRMP28827 1452 aa19.91■□□□□ 0.78
ZEB1-218ENST00000560196 DLC1Q96QB1 1528 aa19.9■□□□□ 0.78
ZEB1-218ENST00000560196 QRICH2Q9H0J4 1663 aa19.9■□□□□ 0.78
ZEB1-218ENST00000560196 LRPPRCP42704 1394 aaKnown RBP19.89■□□□□ 0.77
ZEB1-218ENST00000560196 KTN1Q86UP2 1357 aaKnown RBP19.88■□□□□ 0.77
ZEB1-218ENST00000560196 PLEKHG1Q9ULL1 1385 aa19.88■□□□□ 0.77
ZEB1-218ENST00000560196 THEMISQ8N1K5 641 aaPredicted RBP19.88■□□□□ 0.77
ZEB1-218ENST00000560196 ABCC11Q96J66 1382 aa19.86■□□□□ 0.77
ZEB1-218ENST00000560196 PER1O15534 1290 aaPredicted RBP19.85■□□□□ 0.77
ZEB1-218ENST00000560196 EID1Q9Y6B2 187 aa19.85■□□□□ 0.77
ZEB1-218ENST00000560196 CEP170BQ9Y4F5 1589 aaPredicted RBP19.85■□□□□ 0.77
ZEB1-218ENST00000560196 SIRT1Q96EB6 747 aa19.83■□□□□ 0.77
ZEB1-218ENST00000560196 MED14O60244 1454 aa19.83■□□□□ 0.76
ZEB1-218ENST00000560196 MYOM1P52179 1685 aa19.83■□□□□ 0.76
ZEB1-218ENST00000560196 ZNF142P52746 1687 aaPredicted RBP19.83■□□□□ 0.76
ZEB1-218ENST00000560196 TECPR2O15040 1411 aa19.83■□□□□ 0.76
ZEB1-218ENST00000560196 ADAMTS13Q76LX8 1427 aa19.83■□□□□ 0.76
ZEB1-218ENST00000560196 CENPBP07199 599 aaPredicted RBP19.82■□□□□ 0.76
ZEB1-218ENST00000560196 LTKP29376 864 aa19.82■□□□□ 0.76
ZEB1-218ENST00000560196 PANK3Q9H999 370 aa19.82■□□□□ 0.76
ZEB1-218ENST00000560196 EVC2Q86UK5 1308 aa19.81■□□□□ 0.76
ZEB1-218ENST00000560196 RALBP1Q15311 655 aa19.81■□□□□ 0.76
ZEB1-218ENST00000560196 TXNDC2Q86VQ3 553 aa19.81■□□□□ 0.76
ZEB1-218ENST00000560196 KNDC1Q76NI1 1749 aa19.81■□□□□ 0.76
ZEB1-218ENST00000560196 SETD1BQ9UPS6 1966 aaKnown RBP19.81■□□□□ 0.76
ZEB1-218ENST00000560196 STK26Q9P289 416 aa19.8■□□□□ 0.76
ZEB1-218ENST00000560196 TULP4Q9NRJ4 1543 aa19.8■□□□□ 0.76
ZEB1-218ENST00000560196 METP08581 1390 aa19.8■□□□□ 0.76
ZEB1-218ENST00000560196 FAM135BQ49AJ0 1406 aa19.79■□□□□ 0.76
ZEB1-218ENST00000560196 DIP2AQ14689 1571 aa19.78■□□□□ 0.76
ZEB1-218ENST00000560196 NPC1L1Q9UHC9 1359 aa19.78■□□□□ 0.76
ZEB1-218ENST00000560196 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.76
ZEB1-218ENST00000560196 PRAM1Q96QH2 718 aa19.77■□□□□ 0.76
ZEB1-218ENST00000560196 POGKQ9P215 609 aa19.77■□□□□ 0.76
ZEB1-218ENST00000560196 PARD3Q8TEW0 1356 aa19.77■□□□□ 0.76
ZEB1-218ENST00000560196 CPS1P31327 1500 aa19.76■□□□□ 0.75
ZEB1-218ENST00000560196 YTHDC1Q96MU7 727 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms