RNA–Protein interactions for RNA: ENST00000559904.1

AC093334.1-201, humanhuman

TSL 3 BASIC

Gene AC093334.1, Length 423 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC093334.1-201ENST00000559904 SLC24A3Q9HC58 644 aa12.99□□□□□ -0.33
AC093334.1-201ENST00000559904 KIAA1468Q9P260 1216 aa12.99□□□□□ -0.33
AC093334.1-201ENST00000559904 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
AC093334.1-201ENST00000559904 KIF21AQ7Z4S6 1674 aa12.99□□□□□ -0.33
AC093334.1-201ENST00000559904 ADGRD1Q6QNK2 874 aa12.98□□□□□ -0.33
AC093334.1-201ENST00000559904 TTC13Q8NBP0 860 aa12.98□□□□□ -0.33
AC093334.1-201ENST00000559904 CUX1P39880 1505 aa12.98□□□□□ -0.33
AC093334.1-201ENST00000559904 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
AC093334.1-201ENST00000559904 C3orf80F5H4A9 247 aa12.97□□□□□ -0.33
AC093334.1-201ENST00000559904 MAP2K5Q13163 448 aa12.97□□□□□ -0.33
AC093334.1-201ENST00000559904 SLC4A5Q9BY07 1137 aa12.97□□□□□ -0.33
AC093334.1-201ENST00000559904 TOP2BQ02880 1626 aa12.97□□□□□ -0.33
AC093334.1-201ENST00000559904 SMAPO00193 183 aa12.95□□□□□ -0.34
AC093334.1-201ENST00000559904 PACS2Q86VP3 889 aa12.95□□□□□ -0.34
AC093334.1-201ENST00000559904 CCDC102AQ96A19 550 aa12.95□□□□□ -0.34
AC093334.1-201ENST00000559904 PNMA3Q9UL41 463 aa12.95□□□□□ -0.34
AC093334.1-201ENST00000559904 CCDC9Q9Y3X0 531 aaKnown RBP12.95□□□□□ -0.34
AC093334.1-201ENST00000559904 TK2O00142 265 aa12.94□□□□□ -0.34
AC093334.1-201ENST00000559904 NUDT18Q6ZVK8 323 aa12.94□□□□□ -0.34
AC093334.1-201ENST00000559904 SEPT9Q9UHD8 586 aaPredicted RBP12.94□□□□□ -0.34
AC093334.1-201ENST00000559904 MINK1Q8N4C8 1332 aaPredicted RBP12.93□□□□□ -0.34
AC093334.1-201ENST00000559904 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
AC093334.1-201ENST00000559904 RABGEF1Q9UJ41 708 aa12.93□□□□□ -0.34
AC093334.1-201ENST00000559904 ADGRG1Q9Y653 693 aa12.93□□□□□ -0.34
AC093334.1-201ENST00000559904 IRF6O14896 467 aa12.92□□□□□ -0.34
AC093334.1-201ENST00000559904 ONECUT3O60422 494 aaPredicted RBP12.92□□□□□ -0.34
AC093334.1-201ENST00000559904 TATDN2Q93075 761 aa12.92□□□□□ -0.34
AC093334.1-201ENST00000559904 CEP164Q9UPV0 1460 aa12.9□□□□□ -0.34
AC093334.1-201ENST00000559904 PDS5BQ9NTI5 1447 aa12.88□□□□□ -0.35
AC093334.1-201ENST00000559904 HRO43593 1189 aa12.88□□□□□ -0.35
AC093334.1-201ENST00000559904 NLRP7Q8WX94 980 aa12.88□□□□□ -0.35
AC093334.1-201ENST00000559904 NBPF3Q9H094 633 aa12.88□□□□□ -0.35
AC093334.1-201ENST00000559904 DNMBPQ6XZF7 1577 aa12.88□□□□□ -0.35
AC093334.1-201ENST00000559904 BHMG1C9JSJ3 638 aaPredicted RBP12.87□□□□□ -0.35
AC093334.1-201ENST00000559904 CDK11BP21127 795 aaKnown RBP12.87□□□□□ -0.35
AC093334.1-201ENST00000559904 RBM46Q8TBY0 533 aaKnown RBP12.87□□□□□ -0.35
AC093334.1-201ENST00000559904 AK7Q96M32 723 aa12.87□□□□□ -0.35
AC093334.1-201ENST00000559904 CDK11AQ9UQ88 783 aaPredicted RBP12.87□□□□□ -0.35
AC093334.1-201ENST00000559904 URB2Q14146 1524 aaKnown RBP12.87□□□□□ -0.35
AC093334.1-201ENST00000559904 HMGB1P09429 215 aaKnown RBP12.86□□□□□ -0.35
AC093334.1-201ENST00000559904 METTL3Q86U44 580 aaKnown RBP12.86□□□□□ -0.35
AC093334.1-201ENST00000559904 PXYLP1Q8TE99 480 aa12.86□□□□□ -0.35
AC093334.1-201ENST00000559904 STAC3Q96MF2 364 aa12.86□□□□□ -0.35
AC093334.1-201ENST00000559904 PHOX2BQ99453 314 aa12.86□□□□□ -0.35
AC093334.1-201ENST00000559904 EYA1Q99502 592 aa12.86□□□□□ -0.35
AC093334.1-201ENST00000559904 TOPBP1Q92547 1522 aa12.85□□□□□ -0.35
AC093334.1-201ENST00000559904 OATP04181 439 aa12.85□□□□□ -0.35
AC093334.1-201ENST00000559904 MRPL50Q8N5N7 158 aaKnown RBP12.85□□□□□ -0.35
AC093334.1-201ENST00000559904 SOGA1O94964 1423 aa12.82□□□□□ -0.36
AC093334.1-201ENST00000559904 TRIM66O15016 1216 aa12.82□□□□□ -0.36
AC093334.1-201ENST00000559904 PCDH10Q9P2E7 1040 aa12.82□□□□□ -0.36
AC093334.1-201ENST00000559904 FGD5Q6ZNL6 1462 aa12.82□□□□□ -0.36
AC093334.1-201ENST00000559904 RUSC2Q8N2Y8 1516 aa12.82□□□□□ -0.36
AC093334.1-201ENST00000559904 RCCD1A6NED2 376 aa12.81□□□□□ -0.36
AC093334.1-201ENST00000559904 FAM98CQ17RN3 349 aaKnown RBP12.81□□□□□ -0.36
AC093334.1-201ENST00000559904 MRC2Q9UBG0 1479 aa12.79□□□□□ -0.36
AC093334.1-201ENST00000559904 THOC2Q8NI27 1593 aaKnown RBP12.79□□□□□ -0.36
AC093334.1-201ENST00000559904 IGSF3O75054 1194 aa12.79□□□□□ -0.36
AC093334.1-201ENST00000559904 CHMP4AQ9BY43 222 aa12.79□□□□□ -0.36
AC093334.1-201ENST00000559904 GOLGA8CPA6NN73 597 aa12.78□□□□□ -0.36
AC093334.1-201ENST00000559904 DNAJB2P25686 324 aa12.78□□□□□ -0.36
AC093334.1-201ENST00000559904 MDM2Q00987 491 aaPredicted RBP12.78□□□□□ -0.36
AC093334.1-201ENST00000559904 LAPTM4BQ86VI4 370 aa12.78□□□□□ -0.36
AC093334.1-201ENST00000559904 ZFRQ96KR1 1074 aaKnown RBP12.78□□□□□ -0.36
AC093334.1-201ENST00000559904 WDR97A6NE52 1622 aa12.77□□□□□ -0.36
AC093334.1-201ENST00000559904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.77□□□□□ -0.37
AC093334.1-201ENST00000559904 POLA1P09884 1462 aaPredicted RBP12.77□□□□□ -0.37
AC093334.1-201ENST00000559904 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
AC093334.1-201ENST00000559904 PDIA4P13667 645 aaKnown RBP12.76□□□□□ -0.37
AC093334.1-201ENST00000559904 HSP90B1P14625 803 aaKnown RBP12.76□□□□□ -0.37
AC093334.1-201ENST00000559904 PDE4DQ08499 809 aa12.76□□□□□ -0.37
AC093334.1-201ENST00000559904 WDR62O43379 1518 aa12.76□□□□□ -0.37
AC093334.1-201ENST00000559904 TTLL12Q14166 644 aaPredicted RBP12.75□□□□□ -0.37
AC093334.1-201ENST00000559904 SWT1Q5T5J6 900 aaKnown RBP12.75□□□□□ -0.37
AC093334.1-201ENST00000559904 SAMD7Q7Z3H4 446 aa12.75□□□□□ -0.37
AC093334.1-201ENST00000559904 FAM9AQ8IZU1 332 aaPredicted RBP12.75□□□□□ -0.37
AC093334.1-201ENST00000559904 AMHR2Q16671 573 aa12.74□□□□□ -0.37
AC093334.1-201ENST00000559904 TMEM134Q9H6X4 195 aa12.74□□□□□ -0.37
AC093334.1-201ENST00000559904 ERCC6Q03468 1493 aa12.73□□□□□ -0.37
AC093334.1-201ENST00000559904 EEA1Q15075 1411 aa12.73□□□□□ -0.37
AC093334.1-201ENST00000559904 RNF40O75150 1001 aa12.73□□□□□ -0.37
AC093334.1-201ENST00000559904 RAD54L2Q9Y4B4 1467 aa12.72□□□□□ -0.37
AC093334.1-201ENST00000559904 SPNS2Q8IVW8 549 aa12.72□□□□□ -0.37
AC093334.1-201ENST00000559904 WNT2BQ93097 391 aa12.72□□□□□ -0.37
AC093334.1-201ENST00000559904 KCTD12Q96CX2 325 aaKnown RBP12.72□□□□□ -0.37
AC093334.1-201ENST00000559904 REPIN1Q9BWE0 567 aaKnown RBP12.72□□□□□ -0.37
AC093334.1-201ENST00000559904 TARBP1Q13395 1621 aaKnown RBP12.72□□□□□ -0.37
AC093334.1-201ENST00000559904 PARP9Q8IXQ6 854 aa12.71□□□□□ -0.37
AC093334.1-201ENST00000559904 ANKK1Q8NFD2 765 aa12.71□□□□□ -0.37
AC093334.1-201ENST00000559904 MYT1LQ9UL68 1186 aa12.71□□□□□ -0.37
AC093334.1-201ENST00000559904 BCAMP50895 628 aa12.7□□□□□ -0.38
AC093334.1-201ENST00000559904 HDGFP51858 240 aaKnown RBP12.7□□□□□ -0.38
AC093334.1-201ENST00000559904 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
AC093334.1-201ENST00000559904 GPBP1L1Q9HC44 474 aaPredicted RBP12.7□□□□□ -0.38
AC093334.1-201ENST00000559904 ABCA10Q8WWZ4 1543 aa12.7□□□□□ -0.38
AC093334.1-201ENST00000559904 CLCN1P35523 988 aa12.69□□□□□ -0.38
AC093334.1-201ENST00000559904 LRCH3Q96II8 777 aa12.69□□□□□ -0.38
AC093334.1-201ENST00000559904 GPCPD1Q9NPB8 672 aa12.69□□□□□ -0.38
AC093334.1-201ENST00000559904 CUX2O14529 1486 aa12.69□□□□□ -0.38
AC093334.1-201ENST00000559904 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms