RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 RBM26Q5T8P6 1007 aaKnown RBP11.85□□□□□ -0.51
ZEB1-216ENST00000559496 EYA1Q99502 592 aa11.84□□□□□ -0.51
ZEB1-216ENST00000559496 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
ZEB1-216ENST00000559496 A0A0G2JS52 829 aa11.82□□□□□ -0.52
ZEB1-216ENST00000559496 PPP4CP60510 307 aa11.82□□□□□ -0.52
ZEB1-216ENST00000559496 CC2D2AQ9P2K1 1620 aa11.82□□□□□ -0.52
ZEB1-216ENST00000559496 NCAPD3P42695 1498 aa11.81□□□□□ -0.52
ZEB1-216ENST00000559496 HIC1Q14526 733 aa11.8□□□□□ -0.52
ZEB1-216ENST00000559496 HMGXB3Q12766 1538 aa11.8□□□□□ -0.52
ZEB1-216ENST00000559496 RBM46Q8TBY0 533 aaKnown RBP11.79□□□□□ -0.52
ZEB1-216ENST00000559496 ADGRG1Q9Y653 693 aa11.79□□□□□ -0.52
ZEB1-216ENST00000559496 SWT1Q5T5J6 900 aaKnown RBP11.78□□□□□ -0.52
ZEB1-216ENST00000559496 RGS20O76081 388 aa11.77□□□□□ -0.53
ZEB1-216ENST00000559496 KCNC4Q03721 635 aa11.76□□□□□ -0.53
ZEB1-216ENST00000559496 CCDC88BA6NC98 1476 aa11.75□□□□□ -0.53
ZEB1-216ENST00000559496 TULP1O00294 542 aaPredicted RBP11.75□□□□□ -0.53
ZEB1-216ENST00000559496 GNPATO15228 680 aa11.75□□□□□ -0.53
ZEB1-216ENST00000559496 SLF2Q8IX21 1173 aa11.75□□□□□ -0.53
ZEB1-216ENST00000559496 DNAJB2P25686 324 aa11.74□□□□□ -0.53
ZEB1-216ENST00000559496 SLC4A3P48751 1232 aa11.74□□□□□ -0.53
ZEB1-216ENST00000559496 NECTIN2Q92692 538 aa11.74□□□□□ -0.53
ZEB1-216ENST00000559496 GPR37O15354 613 aa11.73□□□□□ -0.53
ZEB1-216ENST00000559496 RNF40O75150 1001 aa11.73□□□□□ -0.53
ZEB1-216ENST00000559496 OATP04181 439 aa11.73□□□□□ -0.53
ZEB1-216ENST00000559496 FAM161AQ3B820 660 aa11.73□□□□□ -0.53
ZEB1-216ENST00000559496 TJAP1Q5JTD0 557 aa11.72□□□□□ -0.53
ZEB1-216ENST00000559496 GPIHBP1Q8IV16 184 aa11.72□□□□□ -0.53
ZEB1-216ENST00000559496 RCCD1A6NED2 376 aa11.71□□□□□ -0.53
ZEB1-216ENST00000559496 APLP1P51693 650 aa11.71□□□□□ -0.53
ZEB1-216ENST00000559496 TMEM134Q9H6X4 195 aa11.71□□□□□ -0.53
ZEB1-216ENST00000559496 MYT1Q01538 1121 aa11.7□□□□□ -0.54
ZEB1-216ENST00000559496 FECHP22830 423 aa11.69□□□□□ -0.54
ZEB1-216ENST00000559496 PXYLP1Q8TE99 480 aa11.69□□□□□ -0.54
ZEB1-216ENST00000559496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.68□□□□□ -0.54
ZEB1-216ENST00000559496 MTRQ99707 1265 aa11.68□□□□□ -0.54
ZEB1-216ENST00000559496 IL21Q9HBE4 155 aa11.67□□□□□ -0.54
ZEB1-216ENST00000559496 METTL3Q86U44 580 aaKnown RBP11.66□□□□□ -0.54
ZEB1-216ENST00000559496 PRR14Q9BWN1 585 aa11.63□□□□□ -0.55
ZEB1-216ENST00000559496 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.61□□□□□ -0.55
ZEB1-216ENST00000559496 ZNF516Q92618 1163 aa11.61□□□□□ -0.55
ZEB1-216ENST00000559496 SLC10A3P09131 477 aa11.57□□□□□ -0.56
ZEB1-216ENST00000559496 RSPH4AQ5TD94 716 aa11.57□□□□□ -0.56
ZEB1-216ENST00000559496 DAXXQ9UER7 740 aaPredicted RBP11.57□□□□□ -0.56
ZEB1-216ENST00000559496 COPS2P61201 443 aa11.56□□□□□ -0.56
ZEB1-216ENST00000559496 MAP2K5Q13163 448 aa11.56□□□□□ -0.56
ZEB1-216ENST00000559496 KMT5BQ4FZB7 885 aa11.56□□□□□ -0.56
ZEB1-216ENST00000559496 PCDHB3Q9Y5E6 796 aa11.55□□□□□ -0.56
ZEB1-216ENST00000559496 ACTN4O43707 911 aaKnown RBP11.54□□□□□ -0.56
ZEB1-216ENST00000559496 PHOX2BQ99453 314 aa11.54□□□□□ -0.56
ZEB1-216ENST00000559496 ZPR1O75312 459 aa11.54□□□□□ -0.56
ZEB1-216ENST00000559496 CFHP08603 1231 aa11.54□□□□□ -0.56
ZEB1-216ENST00000559496 NKX2-3Q8TAU0 364 aa11.54□□□□□ -0.56
ZEB1-216ENST00000559496 MINK1Q8N4C8 1332 aaPredicted RBP11.53□□□□□ -0.56
ZEB1-216ENST00000559496 IRF6O14896 467 aa11.53□□□□□ -0.56
ZEB1-216ENST00000559496 PPP1R18Q6NYC8 613 aa11.53□□□□□ -0.56
ZEB1-216ENST00000559496 LMOD2Q6P5Q4 547 aa11.53□□□□□ -0.56
ZEB1-216ENST00000559496 BLOC1S3Q6QNY0 202 aa11.53□□□□□ -0.56
ZEB1-216ENST00000559496 CFTRP13569 1480 aa11.52□□□□□ -0.57
ZEB1-216ENST00000559496 CADPSQ9ULU8 1353 aa11.5□□□□□ -0.57
ZEB1-216ENST00000559496 NLRP7Q8WX94 980 aa11.5□□□□□ -0.57
ZEB1-216ENST00000559496 IRX2Q9BZI1 471 aaPredicted RBP11.5□□□□□ -0.57
ZEB1-216ENST00000559496 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.5□□□□□ -0.57
ZEB1-216ENST00000559496 DDX11L8A8MPP1 907 aa11.48□□□□□ -0.57
ZEB1-216ENST00000559496 SULF1Q8IWU6 871 aa11.48□□□□□ -0.57
ZEB1-216ENST00000559496 PRDM2Q13029 1718 aa11.47□□□□□ -0.57
ZEB1-216ENST00000559496 RDH13Q8NBN7 331 aa11.47□□□□□ -0.57
ZEB1-216ENST00000559496 ABCC8Q09428 1581 aa11.47□□□□□ -0.57
ZEB1-216ENST00000559496 TLL1O43897 1013 aa11.44□□□□□ -0.58
ZEB1-216ENST00000559496 CCDC102AQ96A19 550 aa11.44□□□□□ -0.58
ZEB1-216ENST00000559496 TMUB1Q9BVT8 246 aa11.44□□□□□ -0.58
ZEB1-216ENST00000559496 LAMC3Q9Y6N6 1575 aa11.44□□□□□ -0.58
ZEB1-216ENST00000559496 NESP48681 1621 aa11.43□□□□□ -0.58
ZEB1-216ENST00000559496 NR1I2O75469 434 aa11.42□□□□□ -0.58
ZEB1-216ENST00000559496 GGCXP38435 758 aa11.42□□□□□ -0.58
ZEB1-216ENST00000559496 GCGRP47871 477 aa11.42□□□□□ -0.58
ZEB1-216ENST00000559496 KRI1Q8N9T8 703 aaKnown RBP11.42□□□□□ -0.58
ZEB1-216ENST00000559496 ZC3H15Q8WU90 426 aaKnown RBP11.42□□□□□ -0.58
ZEB1-216ENST00000559496 PRKD2Q9BZL6 878 aa11.42□□□□□ -0.58
ZEB1-216ENST00000559496 V9GY48 417 aaPredicted RBP11.42□□□□□ -0.58
ZEB1-216ENST00000559496 WRNQ14191 1432 aaPredicted RBP eCLIP11.42□□□□□ -0.58
ZEB1-216ENST00000559496 ZMYND10O75800 440 aa11.41□□□□□ -0.58
ZEB1-216ENST00000559496 BARGINQ6ZT62 677 aa11.41□□□□□ -0.58
ZEB1-216ENST00000559496 MDM2Q00987 491 aaPredicted RBP11.4□□□□□ -0.59
ZEB1-216ENST00000559496 SCUBE3Q8IX30 993 aa11.4□□□□□ -0.59
ZEB1-216ENST00000559496 FANCD2Q9BXW9 1451 aa11.39□□□□□ -0.59
ZEB1-216ENST00000559496 PUS10Q3MIT2 529 aaKnown RBP11.39□□□□□ -0.59
ZEB1-216ENST00000559496 RNF223E7ERA6 249 aa11.38□□□□□ -0.59
ZEB1-216ENST00000559496 ADH1BP00325 375 aa11.38□□□□□ -0.59
ZEB1-216ENST00000559496 ATP6V1AP38606 617 aa11.38□□□□□ -0.59
ZEB1-216ENST00000559496 CD46P15529 392 aa11.37□□□□□ -0.59
ZEB1-216ENST00000559496 FUT2Q10981 343 aa11.37□□□□□ -0.59
ZEB1-216ENST00000559496 SYNJ1O43426 1573 aa11.36□□□□□ -0.59
ZEB1-216ENST00000559496 CLCN1P35523 988 aa11.36□□□□□ -0.59
ZEB1-216ENST00000559496 MORN1Q5T089 497 aa11.36□□□□□ -0.59
ZEB1-216ENST00000559496 GPCPD1Q9NPB8 672 aa11.36□□□□□ -0.59
ZEB1-216ENST00000559496 PDS5BQ9NTI5 1447 aa11.36□□□□□ -0.59
ZEB1-216ENST00000559496 S1PR4O95977 384 aa11.35□□□□□ -0.59
ZEB1-216ENST00000559496 ANKLE1Q8NAG6 615 aa11.34□□□□□ -0.59
ZEB1-216ENST00000559496 TOP2BQ02880 1626 aa11.34□□□□□ -0.59
ZEB1-216ENST00000559496 CEP164Q9UPV0 1460 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms