RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 TMEM131LA2VDJ0 1609 aa26.44■■□□□ 1.82
SMAD3-210ENST00000559092 TRIM52Q96A61 297 aa26.44■■□□□ 1.82
SMAD3-210ENST00000559092 BCANQ96GW7 911 aa26.44■■□□□ 1.82
SMAD3-210ENST00000559092 PLEKHG1Q9ULL1 1385 aa26.44■■□□□ 1.82
SMAD3-210ENST00000559092 TBX22Q9Y458 520 aa26.39■■□□□ 1.82
SMAD3-210ENST00000559092 SLC4A1APQ9BWU0 796 aaKnown RBP26.38■■□□□ 1.81
SMAD3-210ENST00000559092 PIP4K2BP78356 416 aa26.37■■□□□ 1.81
SMAD3-210ENST00000559092 ACIN1Q9UKV3 1341 aaKnown RBP26.36■■□□□ 1.81
SMAD3-210ENST00000559092 STRCP1A6NGW2 1772 aa26.35■■□□□ 1.81
SMAD3-210ENST00000559092 SCAF1Q9H7N4 1312 aaKnown RBP26.34■■□□□ 1.81
SMAD3-210ENST00000559092 NUTM2DQ5VT03 806 aaPredicted RBP26.32■■□□□ 1.8
SMAD3-210ENST00000559092 PROSER2Q86WR7 435 aaPredicted RBP26.32■■□□□ 1.8
SMAD3-210ENST00000559092 TRPM2O94759 1503 aa26.3■■□□□ 1.8
SMAD3-210ENST00000559092 ZNF326Q5BKZ1 582 aaKnown RBP26.3■■□□□ 1.8
SMAD3-210ENST00000559092 TMEM94Q12767 1356 aa26.3■■□□□ 1.8
SMAD3-210ENST00000559092 SPHKAPQ2M3C7 1700 aa26.28■■□□□ 1.8
SMAD3-210ENST00000559092 SENP3Q9H4L4 574 aaPredicted RBP26.28■■□□□ 1.8
SMAD3-210ENST00000559092 PIK3R4Q99570 1358 aa26.28■■□□□ 1.8
SMAD3-210ENST00000559092 HSPA1LP34931 641 aa26.27■■□□□ 1.8
SMAD3-210ENST00000559092 ADAMTS13Q76LX8 1427 aa26.27■■□□□ 1.8
SMAD3-210ENST00000559092 NKTRP30414 1462 aaKnown RBP26.27■■□□□ 1.8
SMAD3-210ENST00000559092 MYO5BQ9ULV0 1848 aa26.27■■□□□ 1.8
SMAD3-210ENST00000559092 ALKQ9UM73 1620 aa26.25■■□□□ 1.79
SMAD3-210ENST00000559092 MPHOSPH9Q99550 1183 aa26.24■■□□□ 1.79
SMAD3-210ENST00000559092 NWD1Q149M9 1564 aa26.24■■□□□ 1.79
SMAD3-210ENST00000559092 DIP2AQ14689 1571 aa26.22■■□□□ 1.79
SMAD3-210ENST00000559092 SETD5Q9C0A6 1442 aa26.22■■□□□ 1.79
SMAD3-210ENST00000559092 CLTCL1P53675 1640 aa26.21■■□□□ 1.79
SMAD3-210ENST00000559092 RPGRIP1LQ68CZ1 1315 aa26.2■■□□□ 1.79
SMAD3-210ENST00000559092 NCOA3Q9Y6Q9 1424 aa26.2■■□□□ 1.78
SMAD3-210ENST00000559092 VGFO15240 615 aaPredicted RBP26.19■■□□□ 1.78
SMAD3-210ENST00000559092 RBM33Q96EV2 1170 aaKnown RBP26.19■■□□□ 1.78
SMAD3-210ENST00000559092 FOXD1Q16676 465 aa26.18■■□□□ 1.78
SMAD3-210ENST00000559092 AMOTL2Q9Y2J4 779 aa26.16■■□□□ 1.78
SMAD3-210ENST00000559092 MSH6P52701 1360 aa26.16■■□□□ 1.78
SMAD3-210ENST00000559092 DISP3Q9P2K9 1392 aa26.16■■□□□ 1.78
SMAD3-210ENST00000559092 FAM135BQ49AJ0 1406 aa26.15■■□□□ 1.78
SMAD3-210ENST00000559092 SETBP1Q9Y6X0 1596 aa26.15■■□□□ 1.78
SMAD3-210ENST00000559092 CHD2O14647 1828 aaKnown RBP26.13■■□□□ 1.77
SMAD3-210ENST00000559092 NEXMIFQ5QGS0 1516 aa26.13■■□□□ 1.77
SMAD3-210ENST00000559092 CCDC144AA2RUR9 1427 aa26.12■■□□□ 1.77
SMAD3-210ENST00000559092 XIRP1Q702N8 1843 aaKnown RBP26.11■■□□□ 1.77
SMAD3-210ENST00000559092 C19orf44Q9H6X5 657 aa26.1■■□□□ 1.77
SMAD3-210ENST00000559092 SLAIN2Q9P270 581 aa26.1■■□□□ 1.77
SMAD3-210ENST00000559092 PTPRUQ92729 1446 aa26.1■■□□□ 1.77
SMAD3-210ENST00000559092 RAB3GAP2Q9H2M9 1393 aa26.09■■□□□ 1.77
SMAD3-210ENST00000559092 HRCP23327 699 aa26.09■■□□□ 1.77
SMAD3-210ENST00000559092 METP08581 1390 aa26.08■■□□□ 1.77
SMAD3-210ENST00000559092 C14orf37Q86TY3 774 aa26.08■■□□□ 1.77
SMAD3-210ENST00000559092 KIF1BO60333 1816 aa26.07■■□□□ 1.76
SMAD3-210ENST00000559092 CADPS2Q86UW7 1296 aa26.06■■□□□ 1.76
SMAD3-210ENST00000559092 NRXN3Q9Y4C0 1643 aa26.06■■□□□ 1.76
SMAD3-210ENST00000559092 ATF3P18847 181 aa26.03■■□□□ 1.76
SMAD3-210ENST00000559092 SPATA31E1Q6ZUB1 1445 aa26.03■■□□□ 1.76
SMAD3-210ENST00000559092 RGL3Q3MIN7 710 aa26.01■■□□□ 1.75
SMAD3-210ENST00000559092 ANKRD30BQ9BXX2 1392 aa26■■□□□ 1.75
SMAD3-210ENST00000559092 XRN1Q8IZH2 1706 aaKnown RBP25.96■■□□□ 1.75
SMAD3-210ENST00000559092 DCCP43146 1447 aa25.96■■□□□ 1.75
SMAD3-210ENST00000559092 ADGRF5Q8IZF2 1346 aa25.94■■□□□ 1.74
SMAD3-210ENST00000559092 ILDR2Q71H61 639 aa25.92■■□□□ 1.74
SMAD3-210ENST00000559092 PRAG1Q86YV5 1406 aa25.91■■□□□ 1.74
SMAD3-210ENST00000559092 ROBO1Q9Y6N7 1651 aa25.91■■□□□ 1.74
SMAD3-210ENST00000559092 PTCH1Q13635 1447 aa25.9■■□□□ 1.74
SMAD3-210ENST00000559092 PPLO60437 1756 aa25.9■■□□□ 1.74
SMAD3-210ENST00000559092 MED1Q15648 1581 aaPredicted RBP25.89■■□□□ 1.73
SMAD3-210ENST00000559092 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.88■■□□□ 1.73
SMAD3-210ENST00000559092 ADGRL3Q9HAR2 1447 aa25.88■■□□□ 1.73
SMAD3-210ENST00000559092 ROBO2Q9HCK4 1378 aa25.87■■□□□ 1.73
SMAD3-210ENST00000559092 BRINP3Q76B58 766 aa25.85■■□□□ 1.73
SMAD3-210ENST00000559092 PIK3C2GO75747 1445 aa25.84■■□□□ 1.73
SMAD3-210ENST00000559092 PHF23Q9BUL5 403 aaPredicted RBP25.84■■□□□ 1.73
SMAD3-210ENST00000559092 MST1RQ04912 1400 aa25.82■■□□□ 1.72
SMAD3-210ENST00000559092 C14orf93Q9H972 538 aaKnown RBP25.82■■□□□ 1.72
SMAD3-210ENST00000559092 SETD1AO15047 1707 aaKnown RBP25.82■■□□□ 1.72
SMAD3-210ENST00000559092 JCADQ9P266 1359 aa25.82■■□□□ 1.72
SMAD3-210ENST00000559092 LRPPRCP42704 1394 aaKnown RBP25.81■■□□□ 1.72
SMAD3-210ENST00000559092 ABCC11Q96J66 1382 aa25.81■■□□□ 1.72
SMAD3-210ENST00000559092 STAC3Q96MF2 364 aa25.8■■□□□ 1.72
SMAD3-210ENST00000559092 TMEM132EQ6IEE7 984 aa25.78■■□□□ 1.72
SMAD3-210ENST00000559092 TECPR2O15040 1411 aa25.78■■□□□ 1.72
SMAD3-210ENST00000559092 MYOM2P54296 1465 aa25.78■■□□□ 1.72
SMAD3-210ENST00000559092 NRXN1Q9ULB1 1477 aa25.78■■□□□ 1.72
SMAD3-210ENST00000559092 SIRT1Q96EB6 747 aa25.77■■□□□ 1.72
SMAD3-210ENST00000559092 STK26Q9P289 416 aa25.77■■□□□ 1.72
SMAD3-210ENST00000559092 SOCS7O14512 581 aa25.76■■□□□ 1.71
SMAD3-210ENST00000559092 IFT172Q9UG01 1749 aa25.75■■□□□ 1.71
SMAD3-210ENST00000559092 AHDC1Q5TGY3 1603 aaPredicted RBP25.75■■□□□ 1.71
SMAD3-210ENST00000559092 CFAP70Q5T0N1 1121 aa25.74■■□□□ 1.71
SMAD3-210ENST00000559092 PHLPP1O60346 1717 aa25.74■■□□□ 1.71
SMAD3-210ENST00000559092 ASXL1Q8IXJ9 1541 aa25.73■■□□□ 1.71
SMAD3-210ENST00000559092 C1orf167Q5SNV9 1468 aa25.72■■□□□ 1.71
SMAD3-210ENST00000559092 YTHDC2Q9H6S0 1430 aaKnown RBP25.72■■□□□ 1.71
SMAD3-210ENST00000559092 DHX57Q6P158 1386 aaKnown RBP25.72■■□□□ 1.71
SMAD3-210ENST00000559092 SPATA31A6Q5VVP1 1343 aa25.71■■□□□ 1.71
SMAD3-210ENST00000559092 WAPLQ7Z5K2 1190 aa25.71■■□□□ 1.71
SMAD3-210ENST00000559092 COL16A1Q07092 1604 aaPredicted RBP25.7■■□□□ 1.71
SMAD3-210ENST00000559092 DCAF11Q8TEB1 546 aa25.7■■□□□ 1.7
SMAD3-210ENST00000559092 NALCNQ8IZF0 1738 aa25.69■■□□□ 1.7
SMAD3-210ENST00000559092 LRRC59Q96AG4 307 aaKnown RBP25.69■■□□□ 1.7
SMAD3-210ENST00000559092 RGS17Q9UGC6 210 aaPredicted RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms