RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 MYOM2P54296 1465 aa25.87■■□□□ 1.73
CLPX-203ENST00000558958 PPLO60437 1756 aa25.86■■□□□ 1.73
CLPX-203ENST00000558958 CEP170BQ9Y4F5 1589 aaPredicted RBP25.86■■□□□ 1.73
CLPX-203ENST00000558958 PRAG1Q86YV5 1406 aa25.86■■□□□ 1.73
CLPX-203ENST00000558958 ZNF142P52746 1687 aaPredicted RBP25.83■■□□□ 1.72
CLPX-203ENST00000558958 ZFYVE9O95405 1425 aa25.82■■□□□ 1.72
CLPX-203ENST00000558958 VGFO15240 615 aaPredicted RBP25.82■■□□□ 1.72
CLPX-203ENST00000558958 THEMISQ8N1K5 641 aaPredicted RBP25.82■■□□□ 1.72
CLPX-203ENST00000558958 ADGRF5Q8IZF2 1346 aa25.82■■□□□ 1.72
CLPX-203ENST00000558958 TMEM2Q9UHN6 1383 aa25.82■■□□□ 1.72
CLPX-203ENST00000558958 RIMS2Q9UQ26 1411 aa25.82■■□□□ 1.72
CLPX-203ENST00000558958 NRXN1Q9ULB1 1477 aa25.82■■□□□ 1.72
CLPX-203ENST00000558958 NUTM2DQ5VT03 806 aaPredicted RBP25.79■■□□□ 1.72
CLPX-203ENST00000558958 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.78■■□□□ 1.72
CLPX-203ENST00000558958 SLIT1O75093 1534 aa25.77■■□□□ 1.72
CLPX-203ENST00000558958 ARHGAP23Q9P227 1491 aa25.77■■□□□ 1.72
CLPX-203ENST00000558958 HDGFP51858 240 aaKnown RBP25.77■■□□□ 1.72
CLPX-203ENST00000558958 PIK3C2GO75747 1445 aa25.75■■□□□ 1.71
CLPX-203ENST00000558958 RALGAPBQ86X10 1494 aa25.75■■□□□ 1.71
CLPX-203ENST00000558958 TRPM1Q7Z4N2 1603 aa25.73■■□□□ 1.71
CLPX-203ENST00000558958 LTKP29376 864 aa25.71■■□□□ 1.71
CLPX-203ENST00000558958 TXNDC2Q86VQ3 553 aa25.7■■□□□ 1.7
CLPX-203ENST00000558958 EID1Q9Y6B2 187 aa25.7■■□□□ 1.7
CLPX-203ENST00000558958 NBPF1Q3BBV0 1214 aa25.68■■□□□ 1.7
CLPX-203ENST00000558958 CFAP70Q5T0N1 1121 aa25.68■■□□□ 1.7
CLPX-203ENST00000558958 C14orf93Q9H972 538 aaKnown RBP25.68■■□□□ 1.7
CLPX-203ENST00000558958 KIAA1210Q9ULL0 1709 aa25.68■■□□□ 1.7
CLPX-203ENST00000558958 ROCK2O75116 1388 aaKnown RBP25.67■■□□□ 1.7
CLPX-203ENST00000558958 GPRASP1Q5JY77 1395 aa25.67■■□□□ 1.7
CLPX-203ENST00000558958 SCAF11Q99590 1463 aaKnown RBP25.66■■□□□ 1.7
CLPX-203ENST00000558958 PLEKHG1Q9ULL1 1385 aa25.64■■□□□ 1.7
CLPX-203ENST00000558958 ANKLE2Q86XL3 938 aa25.63■■□□□ 1.69
CLPX-203ENST00000558958 CARD11Q9BXL7 1154 aa25.63■■□□□ 1.69
CLPX-203ENST00000558958 SETBP1Q9Y6X0 1596 aa25.63■■□□□ 1.69
CLPX-203ENST00000558958 LMTK3Q96Q04 1460 aa25.62■■□□□ 1.69
CLPX-203ENST00000558958 LAMC1P11047 1609 aa25.62■■□□□ 1.69
CLPX-203ENST00000558958 SENP3Q9H4L4 574 aaPredicted RBP25.61■■□□□ 1.69
CLPX-203ENST00000558958 ALKQ9UM73 1620 aa25.6■■□□□ 1.69
CLPX-203ENST00000558958 NRXN3Q9Y4C0 1643 aa25.6■■□□□ 1.69
CLPX-203ENST00000558958 ADGRB1O14514 1584 aa25.58■■□□□ 1.68
CLPX-203ENST00000558958 IQGAP1P46940 1657 aa25.56■■□□□ 1.68
CLPX-203ENST00000558958 ADAMTS13Q76LX8 1427 aa25.56■■□□□ 1.68
CLPX-203ENST00000558958 BCANQ96GW7 911 aa25.56■■□□□ 1.68
CLPX-203ENST00000558958 EIF4G2P78344 907 aaKnown RBP eCLIP25.55■■□□□ 1.683e-6■■■■■ 37.9
CLPX-203ENST00000558958 TMEM132EQ6IEE7 984 aa25.55■■□□□ 1.68
CLPX-203ENST00000558958 USP47Q96K76 1375 aa25.55■■□□□ 1.68
CLPX-203ENST00000558958 HSPA2P54652 639 aa25.54■■□□□ 1.68
CLPX-203ENST00000558958 MED14O60244 1454 aa25.54■■□□□ 1.68
CLPX-203ENST00000558958 SETD1AO15047 1707 aaKnown RBP25.54■■□□□ 1.68
CLPX-203ENST00000558958 ASXL1Q8IXJ9 1541 aa25.53■■□□□ 1.68
CLPX-203ENST00000558958 HSPA5P11021 654 aaKnown RBP25.53■■□□□ 1.68
CLPX-203ENST00000558958 NCKAP5LQ9HCH0 1330 aa25.52■■□□□ 1.68
CLPX-203ENST00000558958 POLR1AO95602 1720 aaPredicted RBP25.51■■□□□ 1.67
CLPX-203ENST00000558958 TBX22Q9Y458 520 aa25.5■■□□□ 1.67
CLPX-203ENST00000558958 NPHP4O75161 1426 aaPredicted RBP25.5■■□□□ 1.67
CLPX-203ENST00000558958 METP08581 1390 aa25.5■■□□□ 1.67
CLPX-203ENST00000558958 SLC26A8Q96RN1 970 aa25.49■■□□□ 1.67
CLPX-203ENST00000558958 DIP2AQ14689 1571 aa25.49■■□□□ 1.67
CLPX-203ENST00000558958 HIRIP3Q9BW71 556 aaPredicted RBP25.47■■□□□ 1.67
CLPX-203ENST00000558958 YTHDC2Q9H6S0 1430 aaKnown RBP25.46■■□□□ 1.67
CLPX-203ENST00000558958 LRPPRCP42704 1394 aaKnown RBP25.44■■□□□ 1.66
CLPX-203ENST00000558958 ST20-MTHFSA0A0A6YYL1 179 aa25.44■■□□□ 1.66
CLPX-203ENST00000558958 ZNF316A6NFI3 1004 aaPredicted RBP25.44■■□□□ 1.66
CLPX-203ENST00000558958 TRAK1Q9UPV9 953 aa25.44■■□□□ 1.66
CLPX-203ENST00000558958 EIF3AQ14152 1382 aaKnown RBP25.43■■□□□ 1.66
CLPX-203ENST00000558958 STK26Q9P289 416 aa25.42■■□□□ 1.66
CLPX-203ENST00000558958 ABCC11Q96J66 1382 aa25.42■■□□□ 1.66
CLPX-203ENST00000558958 PIK3R4Q99570 1358 aa25.4■■□□□ 1.66
CLPX-203ENST00000558958 STRCQ7RTU9 1775 aa25.39■■□□□ 1.65
CLPX-203ENST00000558958 PTPRUQ92729 1446 aa25.38■■□□□ 1.65
CLPX-203ENST00000558958 TECPR2O15040 1411 aa25.37■■□□□ 1.65
CLPX-203ENST00000558958 DLC1Q96QB1 1528 aa25.37■■□□□ 1.65
CLPX-203ENST00000558958 ARHGEF28Q8N1W1 1705 aaKnown RBP25.36■■□□□ 1.65
CLPX-203ENST00000558958 TESK2Q96S53 571 aa25.36■■□□□ 1.65
CLPX-203ENST00000558958 CENPJQ9HC77 1338 aaPredicted RBP25.34■■□□□ 1.65
CLPX-203ENST00000558958 KNDC1Q76NI1 1749 aa25.34■■□□□ 1.65
CLPX-203ENST00000558958 SIRT1Q96EB6 747 aa25.34■■□□□ 1.65
CLPX-203ENST00000558958 AMOTL2Q9Y2J4 779 aa25.34■■□□□ 1.65
CLPX-203ENST00000558958 PRAM1Q96QH2 718 aa25.32■■□□□ 1.64
CLPX-203ENST00000558958 CPS1P31327 1500 aa25.32■■□□□ 1.64
CLPX-203ENST00000558958 FAM135BQ49AJ0 1406 aa25.31■■□□□ 1.64
CLPX-203ENST00000558958 SBNO2Q9Y2G9 1366 aa25.3■■□□□ 1.64
CLPX-203ENST00000558958 XRN1Q8IZH2 1706 aaKnown RBP25.3■■□□□ 1.64
CLPX-203ENST00000558958 ROBO2Q9HCK4 1378 aa25.3■■□□□ 1.64
CLPX-203ENST00000558958 POGKQ9P215 609 aa25.29■■□□□ 1.64
CLPX-203ENST00000558958 CHD2O14647 1828 aaKnown RBP25.29■■□□□ 1.64
CLPX-203ENST00000558958 C11orf95C9JLR9 678 aaPredicted RBP25.28■■□□□ 1.64
CLPX-203ENST00000558958 PTCH1Q13635 1447 aa25.28■■□□□ 1.64
CLPX-203ENST00000558958 SLC24A1O60721 1099 aa25.28■■□□□ 1.64
CLPX-203ENST00000558958 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
CLPX-203ENST00000558958 WAPLQ7Z5K2 1190 aa25.28■■□□□ 1.64
CLPX-203ENST00000558958 KCNA6P17658 529 aa25.27■■□□□ 1.64
CLPX-203ENST00000558958 QRICH2Q9H0J4 1663 aa25.27■■□□□ 1.64
CLPX-203ENST00000558958 PLEKHH1Q9ULM0 1364 aa25.26■■□□□ 1.63
CLPX-203ENST00000558958 SAFB2Q14151 953 aaKnown RBP eCLIP25.26■■□□□ 1.63
CLPX-203ENST00000558958 DMRT2Q9Y5R5 561 aa25.25■■□□□ 1.63
CLPX-203ENST00000558958 TMF1P82094 1093 aa25.24■■□□□ 1.63
CLPX-203ENST00000558958 NWD1Q149M9 1564 aa25.24■■□□□ 1.63
CLPX-203ENST00000558958 WASHC2AQ641Q2 1341 aa25.24■■□□□ 1.63
CLPX-203ENST00000558958 DISP3Q9P2K9 1392 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms