RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 SIGLEC1Q9BZZ2 1709 aa8.49□□□□□ -1.05
IDH3A-206ENST00000558535 INO80Q9ULG1 1556 aaPredicted RBP8.49□□□□□ -1.05
IDH3A-206ENST00000558535 UHRF1BP1Q6BDS2 1440 aa8.49□□□□□ -1.05
IDH3A-206ENST00000558535 PAK3O75914 559 aaPredicted RBP8.49□□□□□ -1.05
IDH3A-206ENST00000558535 CHMP4BQ9H444 224 aaKnown RBP8.49□□□□□ -1.05
IDH3A-206ENST00000558535 MROH2AA6NES4 1674 aa8.49□□□□□ -1.05
IDH3A-206ENST00000558535 ATP7AQ04656 1500 aa8.49□□□□□ -1.05
IDH3A-206ENST00000558535 KIDINS220Q9ULH0 1771 aa8.49□□□□□ -1.05
IDH3A-206ENST00000558535 CLSTN1O94985 981 aa8.49□□□□□ -1.05
IDH3A-206ENST00000558535 RNF216Q9NWF9 866 aaPredicted RBP8.49□□□□□ -1.05
IDH3A-206ENST00000558535 PLXNC1O60486 1568 aa8.49□□□□□ -1.05
IDH3A-206ENST00000558535 FBXO41Q8TF61 875 aa8.48□□□□□ -1.05
IDH3A-206ENST00000558535 DDRGK1Q96HY6 314 aa8.48□□□□□ -1.05
IDH3A-206ENST00000558535 TIAM1Q13009 1591 aa8.48□□□□□ -1.05
IDH3A-206ENST00000558535 MCCP23508 829 aa8.48□□□□□ -1.05
IDH3A-206ENST00000558535 MMP14P50281 582 aa8.48□□□□□ -1.05
IDH3A-206ENST00000558535 TICAM2Q86XR7 235 aa8.48□□□□□ -1.05
IDH3A-206ENST00000558535 ZNF622Q969S3 477 aaKnown RBP eCLIP8.48□□□□□ -1.05
IDH3A-206ENST00000558535 VPS8Q8N3P4 1428 aa8.48□□□□□ -1.05
IDH3A-206ENST00000558535 A2MP01023 1474 aa8.47□□□□□ -1.05
IDH3A-206ENST00000558535 SUPT6HQ7KZ85 1726 aaKnown RBP8.47□□□□□ -1.05
IDH3A-206ENST00000558535 SLC20A2Q08357 652 aa8.47□□□□□ -1.05
IDH3A-206ENST00000558535 MLECQ14165 292 aa8.47□□□□□ -1.05
IDH3A-206ENST00000558535 ILDR1Q86SU0 546 aaPredicted RBP8.47□□□□□ -1.05
IDH3A-206ENST00000558535 ADGBQ8N7X0 1667 aa8.46□□□□□ -1.05
IDH3A-206ENST00000558535 SETD1BQ9UPS6 1966 aaKnown RBP8.46□□□□□ -1.05
IDH3A-206ENST00000558535 MBD5Q9P267 1494 aa8.46□□□□□ -1.06
IDH3A-206ENST00000558535 PTPRTO14522 1441 aa8.46□□□□□ -1.06
IDH3A-206ENST00000558535 TPRNQ4KMQ1 711 aa8.46□□□□□ -1.06
IDH3A-206ENST00000558535 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
IDH3A-206ENST00000558535 CCDC9Q9Y3X0 531 aaKnown RBP8.46□□□□□ -1.06
IDH3A-206ENST00000558535 CCDC141Q6ZP82 1450 aa8.45□□□□□ -1.06
IDH3A-206ENST00000558535 ARHGEF5Q12774 1597 aa8.45□□□□□ -1.06
IDH3A-206ENST00000558535 SECISBP2LQ93073 1101 aaKnown RBP8.45□□□□□ -1.06
IDH3A-206ENST00000558535 ZNF777Q9ULD5 760 aaPredicted RBP8.45□□□□□ -1.06
IDH3A-206ENST00000558535 NCOA2Q15596 1464 aa8.44□□□□□ -1.06
IDH3A-206ENST00000558535 MIA2Q96PC5 1412 aa8.44□□□□□ -1.06
IDH3A-206ENST00000558535 DHX29Q7Z478 1369 aaKnown RBP8.44□□□□□ -1.06
IDH3A-206ENST00000558535 HNRNPMP52272 730 aaKnown RBP eCLIP8.44□□□□□ -1.06
IDH3A-206ENST00000558535 SETQ01105 290 aaPredicted RBP8.43□□□□□ -1.06
IDH3A-206ENST00000558535 C3P01024 1663 aa8.43□□□□□ -1.06
IDH3A-206ENST00000558535 IQSEC2Q5JU85 1478 aa8.43□□□□□ -1.06
IDH3A-206ENST00000558535 LRRC9Q6ZRR7 1453 aa8.43□□□□□ -1.06
IDH3A-206ENST00000558535 CEP120Q8N960 986 aa8.43□□□□□ -1.06
IDH3A-206ENST00000558535 GTPBP4Q9BZE4 634 aaKnown RBP8.43□□□□□ -1.06
IDH3A-206ENST00000558535 PHF14O94880 888 aa8.42□□□□□ -1.06
IDH3A-206ENST00000558535 ITGAEP38570 1179 aa8.42□□□□□ -1.06
IDH3A-206ENST00000558535 RGS3P49796 1198 aa8.42□□□□□ -1.06
IDH3A-206ENST00000558535 ZMYM3Q14202 1370 aa8.42□□□□□ -1.06
IDH3A-206ENST00000558535 CAMSAP2Q08AD1 1489 aa8.42□□□□□ -1.06
IDH3A-206ENST00000558535 PLA2R1Q13018 1463 aa8.42□□□□□ -1.06
IDH3A-206ENST00000558535 IRX3P78415 501 aaPredicted RBP8.42□□□□□ -1.06
IDH3A-206ENST00000558535 MAST1Q9Y2H9 1570 aa8.42□□□□□ -1.06
IDH3A-206ENST00000558535 LETM1O95202 739 aaPredicted RBP8.41□□□□□ -1.06
IDH3A-206ENST00000558535 RGS22Q8NE09 1264 aa8.41□□□□□ -1.06
IDH3A-206ENST00000558535 NCOA1Q15788 1441 aa8.4□□□□□ -1.06
IDH3A-206ENST00000558535 TSPY4P0CV99 314 aa8.4□□□□□ -1.06
IDH3A-206ENST00000558535 TSPY10P0CW01 314 aa8.4□□□□□ -1.06
IDH3A-206ENST00000558535 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.4□□□□□ -1.06
IDH3A-206ENST00000558535 HSPA2P54652 639 aa8.4□□□□□ -1.07
IDH3A-206ENST00000558535 DMTNQ08495 405 aa8.4□□□□□ -1.07
IDH3A-206ENST00000558535 PKD2Q13563 968 aa8.4□□□□□ -1.07
IDH3A-206ENST00000558535 ISY1Q9ULR0 285 aaKnown RBP8.4□□□□□ -1.07
IDH3A-206ENST00000558535 ZNF142P52746 1687 aaPredicted RBP8.4□□□□□ -1.07
IDH3A-206ENST00000558535 PTPRKQ15262 1439 aa8.4□□□□□ -1.07
IDH3A-206ENST00000558535 CEBPAP49715 358 aaPredicted RBP8.39□□□□□ -1.07
IDH3A-206ENST00000558535 PLCB2Q00722 1185 aa8.39□□□□□ -1.07
IDH3A-206ENST00000558535 KDM5DQ9BY66 1539 aa8.39□□□□□ -1.07
IDH3A-206ENST00000558535 MYOM3Q5VTT5 1437 aa8.39□□□□□ -1.07
IDH3A-206ENST00000558535 CERKQ8TCT0 537 aa8.39□□□□□ -1.07
IDH3A-206ENST00000558535 POLR3GLQ9BT43 218 aa8.39□□□□□ -1.07
IDH3A-206ENST00000558535 YY1AP1Q9H869 796 aa8.39□□□□□ -1.07
IDH3A-206ENST00000558535 TMEM51Q9NW97 253 aa8.39□□□□□ -1.07
IDH3A-206ENST00000558535 SHANK2Q9UPX8 1470 aa8.38□□□□□ -1.07
IDH3A-206ENST00000558535 EIF2AK4Q9P2K8 1649 aaKnown RBP8.38□□□□□ -1.07
IDH3A-206ENST00000558535 PZPP20742 1482 aa8.38□□□□□ -1.07
IDH3A-206ENST00000558535 A2ML1A8K2U0 1454 aa8.37□□□□□ -1.07
IDH3A-206ENST00000558535 FRAT1Q92837 279 aaPredicted RBP8.37□□□□□ -1.07
IDH3A-206ENST00000558535 PUS7Q96PZ0 661 aaKnown RBP8.37□□□□□ -1.07
IDH3A-206ENST00000558535 MYO3AQ8NEV4 1616 aa8.36□□□□□ -1.07
IDH3A-206ENST00000558535 CLTCQ00610 1675 aaKnown RBP8.36□□□□□ -1.07
IDH3A-206ENST00000558535 ZC3H13Q5T200 1668 aaKnown RBP8.36□□□□□ -1.07
IDH3A-206ENST00000558535 NLRP1Q9C000 1473 aa8.36□□□□□ -1.07
IDH3A-206ENST00000558535 PLCD4Q9BRC7 762 aa8.36□□□□□ -1.07
IDH3A-206ENST00000558535 ZNF644Q9H582 1327 aaPredicted RBP8.36□□□□□ -1.07
IDH3A-206ENST00000558535 CEP170BQ9Y4F5 1589 aaPredicted RBP8.36□□□□□ -1.07
IDH3A-206ENST00000558535 RNF17Q9BXT8 1623 aaKnown RBP8.36□□□□□ -1.07
IDH3A-206ENST00000558535 STRCQ7RTU9 1775 aa8.36□□□□□ -1.07
IDH3A-206ENST00000558535 MS4A1P11836 297 aa8.36□□□□□ -1.07
IDH3A-206ENST00000558535 TCOF1Q13428 1488 aaKnown RBP8.35□□□□□ -1.07
IDH3A-206ENST00000558535 TCERG1O14776 1098 aaKnown RBP8.35□□□□□ -1.07
IDH3A-206ENST00000558535 GGT6Q6P531 493 aa8.35□□□□□ -1.07
IDH3A-206ENST00000558535 TSPYL1Q9H0U9 437 aa8.35□□□□□ -1.07
IDH3A-206ENST00000558535 RRAGDQ9NQL2 400 aaPredicted RBP8.35□□□□□ -1.07
IDH3A-206ENST00000558535 DUOX2Q9NRD8 1548 aa8.35□□□□□ -1.07
IDH3A-206ENST00000558535 NPM3O75607 178 aaKnown RBP8.35□□□□□ -1.07
IDH3A-206ENST00000558535 PPP4R3BQ5MIZ7 849 aa8.35□□□□□ -1.07
IDH3A-206ENST00000558535 CAMSAP1Q5T5Y3 1602 aa8.34□□□□□ -1.07
IDH3A-206ENST00000558535 FAM193AP78312 1265 aa8.34□□□□□ -1.07
IDH3A-206ENST00000558535 TMEM132AQ24JP5 1023 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms