RNA–Protein interactions for RNA: ENST00000557575.5

KLC1-225, Transcript of kinesin light chain 1, human

TSL 5 BASIC

Gene KLC1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLC1-225	ENST00000557575	MLH3	Q9UHC1	1453 aa		32.97	■■■□□ 2.87
KLC1-225	ENST00000557575	MROH2A	A6NES4	1674 aa		32.94	■■■□□ 2.86
KLC1-225	ENST00000557575	IFT172	Q9UG01	1749 aa		32.94	■■■□□ 2.86
KLC1-225	ENST00000557575	ABCA6	Q8N139	1617 aa		32.94	■■■□□ 2.86
KLC1-225	ENST00000557575	FRMPD1	Q5SYB0	1578 aa		32.93	■■■□□ 2.86
KLC1-225	ENST00000557575	SYNM	O15061	1565 aa		32.91	■■■□□ 2.86
KLC1-225	ENST00000557575	GGT6	Q6P531	493 aa		32.9	■■■□□ 2.86
KLC1-225	ENST00000557575	CFAP70	Q5T0N1	1121 aa		32.89	■■■□□ 2.86
KLC1-225	ENST00000557575	KNSTRN	Q9Y448	316 aa		32.89	■■■□□ 2.86
KLC1-225	ENST00000557575	ADGRF5	Q8IZF2	1346 aa		32.89	■■■□□ 2.86
KLC1-225	ENST00000557575	CFAP65	Q6ZU64	1925 aa	Known RBP	32.89	■■■□□ 2.86
KLC1-225	ENST00000557575	RBM19	Q9Y4C8	960 aa	Known RBP	32.87	■■■□□ 2.85
KLC1-225	ENST00000557575	RNF123	Q5XPI4	1314 aa		32.86	■■■□□ 2.85
KLC1-225	ENST00000557575	B4GALNT3	Q6L9W6	998 aa		32.86	■■■□□ 2.85
KLC1-225	ENST00000557575	NEO1	Q92859	1461 aa		32.85	■■■□□ 2.85
KLC1-225	ENST00000557575	KDM5A	P29375	1690 aa	Known RBP	32.85	■■■□□ 2.85
KLC1-225	ENST00000557575	NPAT	Q14207	1427 aa		32.84	■■■□□ 2.85
KLC1-225	ENST00000557575	ADGRB3	O60242	1522 aa		32.84	■■■□□ 2.85
KLC1-225	ENST00000557575	CHGA	P10645	457 aa	Known RBP	32.84	■■■□□ 2.85
KLC1-225	ENST00000557575	MYOM1	P52179	1685 aa		32.83	■■■□□ 2.85
KLC1-225	ENST00000557575	SALL2	Q9Y467	1007 aa	Predicted RBP	32.83	■■■□□ 2.85
KLC1-225	ENST00000557575	NRXN1	Q9ULB1	1477 aa		32.8	■■■□□ 2.84
KLC1-225	ENST00000557575	RAPGEF3	O95398	923 aa		32.79	■■■□□ 2.84
KLC1-225	ENST00000557575	ZMYM4	Q5VZL5	1548 aa		32.79	■■■□□ 2.84
KLC1-225	ENST00000557575	SLC24A1	O60721	1099 aa		32.79	■■■□□ 2.84
KLC1-225	ENST00000557575	NOS1	P29475	1434 aa		32.79	■■■□□ 2.84
KLC1-225	ENST00000557575	ABCC3	O15438	1527 aa		32.77	■■■□□ 2.84
KLC1-225	ENST00000557575	INSR	P06213	1382 aa		32.77	■■■□□ 2.84
KLC1-225	ENST00000557575	BLM	P54132	1417 aa	Predicted RBP	32.77	■■■□□ 2.84
KLC1-225	ENST00000557575	ASXL1	Q8IXJ9	1541 aa		32.76	■■■□□ 2.83
KLC1-225	ENST00000557575	PDE3B	Q13370	1112 aa		32.76	■■■□□ 2.83
KLC1-225	ENST00000557575	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.76	■■■□□ 2.83
KLC1-225	ENST00000557575	PPL	O60437	1756 aa		32.74	■■■□□ 2.83
KLC1-225	ENST00000557575	CAMSAP1	Q5T5Y3	1602 aa		32.74	■■■□□ 2.83
KLC1-225	ENST00000557575	ERVK-7	P63135	1459 aa		32.72	■■■□□ 2.83
KLC1-225	ENST00000557575	PPP2R1A	P30153	589 aa		32.72	■■■□□ 2.83
KLC1-225	ENST00000557575	DIP2C	Q9Y2E4	1556 aa		32.71	■■■□□ 2.83
KLC1-225	ENST00000557575	MYO3A	Q8NEV4	1616 aa		32.71	■■■□□ 2.83
KLC1-225	ENST00000557575	SETBP1	Q9Y6X0	1596 aa		32.7	■■■□□ 2.83
KLC1-225	ENST00000557575	RICTOR	Q6R327	1708 aa		32.69	■■■□□ 2.82
KLC1-225	ENST00000557575	PIK3C2G	O75747	1445 aa		32.66	■■■□□ 2.82
KLC1-225	ENST00000557575	NPC1L1	Q9UHC9	1359 aa		32.65	■■■□□ 2.82
KLC1-225	ENST00000557575	SIGLEC1	Q9BZZ2	1709 aa		32.65	■■■□□ 2.82
KLC1-225	ENST00000557575	RCAN3	Q9UKA8	241 aa		32.65	■■■□□ 2.82
KLC1-225	ENST00000557575	WDR43	Q15061	677 aa	Known RBP eCLIP	32.63	■■■□□ 2.81
KLC1-225	ENST00000557575	ADAMTS8	Q9UP79	889 aa		32.63	■■■□□ 2.81
KLC1-225	ENST00000557575	SBNO2	Q9Y2G9	1366 aa		32.63	■■■□□ 2.81
KLC1-225	ENST00000557575	CCDC136	Q96JN2	1154 aa		32.63	■■■□□ 2.81
KLC1-225	ENST00000557575	RPGRIP1L	Q68CZ1	1315 aa		32.63	■■■□□ 2.81
KLC1-225	ENST00000557575	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.63	■■■□□ 2.81
KLC1-225	ENST00000557575	RRP1	P56182	461 aa	Known RBP	32.62	■■■□□ 2.81
KLC1-225	ENST00000557575	CDCA7L	Q96GN5	454 aa		32.61	■■■□□ 2.81
KLC1-225	ENST00000557575	C14orf93	Q9H972	538 aa	Known RBP	32.6	■■■□□ 2.81
KLC1-225	ENST00000557575	TRAK1	Q9UPV9	953 aa		32.59	■■■□□ 2.81
KLC1-225	ENST00000557575	ZC3H13	Q5T200	1668 aa	Known RBP	32.59	■■■□□ 2.81
KLC1-225	ENST00000557575	PIK3C2B	O00750	1634 aa		32.58	■■■□□ 2.81
KLC1-225	ENST00000557575	CYB5RL	Q6IPT4	315 aa		32.57	■■■□□ 2.8
KLC1-225	ENST00000557575	QRICH2	Q9H0J4	1663 aa		32.57	■■■□□ 2.8
KLC1-225	ENST00000557575	ADGRB1	O14514	1584 aa		32.56	■■■□□ 2.8
KLC1-225	ENST00000557575	YEATS2	Q9ULM3	1422 aa		32.55	■■■□□ 2.8
KLC1-225	ENST00000557575	TMEM132E	Q6IEE7	984 aa		32.52	■■■□□ 2.8
KLC1-225	ENST00000557575	GLI2	P10070	1586 aa		32.52	■■■□□ 2.8
KLC1-225	ENST00000557575	ARHGAP31	Q2M1Z3	1444 aa		32.52	■■■□□ 2.8
KLC1-225	ENST00000557575	MYT1	Q01538	1121 aa		32.51	■■■□□ 2.79
KLC1-225	ENST00000557575	CARD14	Q9BXL6	1004 aa		32.51	■■■□□ 2.79
KLC1-225	ENST00000557575	NEXMIF	Q5QGS0	1516 aa		32.49	■■■□□ 2.79
KLC1-225	ENST00000557575	VGF	O15240	615 aa	Predicted RBP	32.48	■■■□□ 2.79
KLC1-225	ENST00000557575	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.48	■■■□□ 2.79
KLC1-225	ENST00000557575	EXOC6	Q8TAG9	804 aa		32.43	■■■□□ 2.78
KLC1-225	ENST00000557575	IDI1	Q13907	227 aa		32.42	■■■□□ 2.78
KLC1-225	ENST00000557575	PLEKHH1	Q9ULM0	1364 aa		32.42	■■■□□ 2.78
KLC1-225	ENST00000557575	FANCI	Q9NVI1	1328 aa		32.41	■■■□□ 2.78
KLC1-225	ENST00000557575	SLC52A1	Q9NWF4	448 aa		32.41	■■■□□ 2.78
KLC1-225	ENST00000557575	PREX1	Q8TCU6	1659 aa		32.4	■■■□□ 2.78
KLC1-225	ENST00000557575	RIMBP3C	A6NJZ7	1639 aa		32.4	■■■□□ 2.78
KLC1-225	ENST00000557575	RIMBP3B	A6NNM3	1639 aa		32.4	■■■□□ 2.78
KLC1-225	ENST00000557575	RIMBP3	Q9UFD9	1639 aa		32.4	■■■□□ 2.78
KLC1-225	ENST00000557575	FAM69C	Q0P6D2	419 aa		32.4	■■■□□ 2.78
KLC1-225	ENST00000557575	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.4	■■■□□ 2.78
KLC1-225	ENST00000557575	NSD3	Q9BZ95	1437 aa		32.39	■■■□□ 2.78
KLC1-225	ENST00000557575	MYO5B	Q9ULV0	1848 aa		32.38	■■■□□ 2.77
KLC1-225	ENST00000557575	SLC12A5	Q9H2X9	1139 aa		32.37	■■■□□ 2.77
KLC1-225	ENST00000557575	DIP2B	Q9P265	1576 aa		32.36	■■■□□ 2.77
KLC1-225	ENST00000557575	TSPOAP1	O95153	1857 aa		32.36	■■■□□ 2.77
KLC1-225	ENST00000557575	CCDC146	Q8IYE0	955 aa		32.35	■■■□□ 2.77
KLC1-225	ENST00000557575	ANP32E	Q9BTT0	268 aa		32.35	■■■□□ 2.77
KLC1-225	ENST00000557575	GOLGA2	Q08379	1002 aa		32.34	■■■□□ 2.77
KLC1-225	ENST00000557575	ZNF521	Q96K83	1311 aa		32.33	■■■□□ 2.77
KLC1-225	ENST00000557575	PLIN1	O60240	522 aa		32.32	■■■□□ 2.76
KLC1-225	ENST00000557575	EVC2	Q86UK5	1308 aa		32.32	■■■□□ 2.76
KLC1-225	ENST00000557575	ZFYVE9	O95405	1425 aa		32.31	■■■□□ 2.76
KLC1-225	ENST00000557575	TMEM131L	A2VDJ0	1609 aa		32.31	■■■□□ 2.76
KLC1-225	ENST00000557575	MORC1	Q86VD1	984 aa		32.31	■■■□□ 2.76
KLC1-225	ENST00000557575	DUSP27	Q5VZP5	1158 aa		32.3	■■■□□ 2.76
KLC1-225	ENST00000557575	TULP4	Q9NRJ4	1543 aa		32.28	■■■□□ 2.76
KLC1-225	ENST00000557575	POLR3A	O14802	1390 aa	Predicted RBP	32.28	■■■□□ 2.76
KLC1-225	ENST00000557575	USP32	Q8NFA0	1604 aa		32.27	■■■□□ 2.76
KLC1-225	ENST00000557575	APAF1	O14727	1248 aa		32.26	■■■□□ 2.76
KLC1-225	ENST00000557575	SENP3	Q9H4L4	574 aa	Predicted RBP	32.26	■■■□□ 2.76
KLC1-225	ENST00000557575	PUS7	Q96PZ0	661 aa	Known RBP	32.25	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms