RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 TMEM131LA2VDJ0 1609 aa34.3■■■■□ 3.08
PABPN1-207ENST00000556821 POTEAQ6S8J7 498 aa34.26■■■■□ 3.08
PABPN1-207ENST00000556821 TMEM2Q9UHN6 1383 aa34.23■■■■□ 3.07
PABPN1-207ENST00000556821 SLC52A1Q9NWF4 448 aa34.23■■■■□ 3.07
PABPN1-207ENST00000556821 LTKP29376 864 aa34.2■■■■□ 3.07
PABPN1-207ENST00000556821 FAM135BQ49AJ0 1406 aa34.2■■■■□ 3.06
PABPN1-207ENST00000556821 STAG3Q9UJ98 1225 aa34.18■■■■□ 3.06
PABPN1-207ENST00000556821 TXNDC2Q86VQ3 553 aa34.15■■■■□ 3.06
PABPN1-207ENST00000556821 ZFYVE9O95405 1425 aa34.12■■■■□ 3.05
PABPN1-207ENST00000556821 CLTCL1P53675 1640 aa34.12■■■■□ 3.05
PABPN1-207ENST00000556821 KIF1BO60333 1816 aa34.1■■■■□ 3.05
PABPN1-207ENST00000556821 EID1Q9Y6B2 187 aa34.09■■■■□ 3.05
PABPN1-207ENST00000556821 TRPM2O94759 1503 aa34.09■■■■□ 3.05
PABPN1-207ENST00000556821 XIRP1Q702N8 1843 aaKnown RBP34.06■■■■□ 3.04
PABPN1-207ENST00000556821 RIMS2Q9UQ26 1411 aa34.03■■■■□ 3.04
PABPN1-207ENST00000556821 TRIM52Q96A61 297 aa34.02■■■■□ 3.04
PABPN1-207ENST00000556821 TMEM94Q12767 1356 aa33.98■■■■□ 3.03
PABPN1-207ENST00000556821 CHD2O14647 1828 aaKnown RBP33.97■■■■□ 3.03
PABPN1-207ENST00000556821 CHGAP10645 457 aaKnown RBP33.96■■■■□ 3.03
PABPN1-207ENST00000556821 KCNA6P17658 529 aa33.96■■■■□ 3.03
PABPN1-207ENST00000556821 NWD1Q149M9 1564 aa33.94■■■■□ 3.02
PABPN1-207ENST00000556821 PLEKHG1Q9ULL1 1385 aa33.93■■■■□ 3.02
PABPN1-207ENST00000556821 SLC4A1APQ9BWU0 796 aaKnown RBP33.92■■■■□ 3.02
PABPN1-207ENST00000556821 SETD5Q9C0A6 1442 aa33.92■■■■□ 3.02
PABPN1-207ENST00000556821 NRXN3Q9Y4C0 1643 aa33.9■■■■□ 3.02
PABPN1-207ENST00000556821 NEXMIFQ5QGS0 1516 aa33.88■■■■□ 3.01
PABPN1-207ENST00000556821 SLC26A8Q96RN1 970 aa33.87■■■■□ 3.01
PABPN1-207ENST00000556821 DIP2AQ14689 1571 aa33.86■■■■□ 3.01
PABPN1-207ENST00000556821 PROSER2Q86WR7 435 aaPredicted RBP33.85■■■■□ 3.01
PABPN1-207ENST00000556821 PPP1R15AO75807 674 aaPredicted RBP33.84■■■■□ 3.01
PABPN1-207ENST00000556821 PPLO60437 1756 aa33.84■■■■□ 3.01
PABPN1-207ENST00000556821 HDGFP51858 240 aaKnown RBP33.83■■■■□ 3.01
PABPN1-207ENST00000556821 NUTM2DQ5VT03 806 aaPredicted RBP33.83■■■■□ 3.01
PABPN1-207ENST00000556821 ADAMTS13Q76LX8 1427 aa33.83■■■■□ 3.01
PABPN1-207ENST00000556821 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.83■■■■□ 3.01
PABPN1-207ENST00000556821 RBM33Q96EV2 1170 aaKnown RBP33.83■■■■□ 3.01
PABPN1-207ENST00000556821 RAB3GAP2Q9H2M9 1393 aa33.83■■■■□ 3.01
PABPN1-207ENST00000556821 SETBP1Q9Y6X0 1596 aa33.81■■■■□ 3
PABPN1-207ENST00000556821 FOXD1Q16676 465 aa33.79■■■■□ 3
PABPN1-207ENST00000556821 NKTRP30414 1462 aaKnown RBP33.79■■■■□ 3
PABPN1-207ENST00000556821 ROBO1Q9Y6N7 1651 aa33.78■■■■□ 3
PABPN1-207ENST00000556821 JCADQ9P266 1359 aa33.78■■■■□ 3
PABPN1-207ENST00000556821 UPF1Q92900 1129 aaKnown RBP eCLIP33.78■■■■□ 3
PABPN1-207ENST00000556821 MPHOSPH9Q99550 1183 aa33.78■■■■□ 3
PABPN1-207ENST00000556821 SLAIN2Q9P270 581 aa33.78■■■■□ 3
PABPN1-207ENST00000556821 IFT172Q9UG01 1749 aa33.77■■■■□ 3
PABPN1-207ENST00000556821 BCANQ96GW7 911 aa33.77■■■■□ 3
PABPN1-207ENST00000556821 SETD1AO15047 1707 aaKnown RBP33.74■■■□□ 2.99
PABPN1-207ENST00000556821 ZNF326Q5BKZ1 582 aaKnown RBP33.72■■■□□ 2.99
PABPN1-207ENST00000556821 ACIN1Q9UKV3 1341 aaKnown RBP33.72■■■□□ 2.99
PABPN1-207ENST00000556821 TBX22Q9Y458 520 aa33.71■■■□□ 2.99
PABPN1-207ENST00000556821 XRN1Q8IZH2 1706 aaKnown RBP33.7■■■□□ 2.99
PABPN1-207ENST00000556821 MSH6P52701 1360 aa33.68■■■□□ 2.98
PABPN1-207ENST00000556821 CCDC144AA2RUR9 1427 aa33.68■■■□□ 2.98
PABPN1-207ENST00000556821 PIK3R4Q99570 1358 aa33.64■■■□□ 2.98
PABPN1-207ENST00000556821 SPATA31E1Q6ZUB1 1445 aa33.63■■■□□ 2.97
PABPN1-207ENST00000556821 SPATA31A6Q5VVP1 1343 aa33.62■■■□□ 2.97
PABPN1-207ENST00000556821 ZNF772Q68DY9 489 aaPredicted RBP33.62■■■□□ 2.97
PABPN1-207ENST00000556821 PTPRUQ92729 1446 aa33.62■■■□□ 2.97
PABPN1-207ENST00000556821 LRP6O75581 1613 aa33.61■■■□□ 2.97
PABPN1-207ENST00000556821 RPGRIP1LQ68CZ1 1315 aa33.55■■■□□ 2.96
PABPN1-207ENST00000556821 NCOA3Q9Y6Q9 1424 aa33.54■■■□□ 2.96
PABPN1-207ENST00000556821 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.54■■■□□ 2.96
PABPN1-207ENST00000556821 COL16A1Q07092 1604 aaPredicted RBP33.53■■■□□ 2.96
PABPN1-207ENST00000556821 PHLPP1O60346 1717 aa33.53■■■□□ 2.96
PABPN1-207ENST00000556821 METP08581 1390 aa33.53■■■□□ 2.96
PABPN1-207ENST00000556821 HRCP23327 699 aa33.53■■■□□ 2.96
PABPN1-207ENST00000556821 VGFO15240 615 aaPredicted RBP33.49■■■□□ 2.95
PABPN1-207ENST00000556821 RXRBP28702 533 aa33.49■■■□□ 2.95
PABPN1-207ENST00000556821 MEX3CQ5U5Q3 659 aaKnown RBP33.47■■■□□ 2.95
PABPN1-207ENST00000556821 AMOTL2Q9Y2J4 779 aa33.47■■■□□ 2.95
PABPN1-207ENST00000556821 NALCNQ8IZF0 1738 aa33.46■■■□□ 2.95
PABPN1-207ENST00000556821 ANKRD30BQ9BXX2 1392 aa33.46■■■□□ 2.95
PABPN1-207ENST00000556821 RGL3Q3MIN7 710 aa33.44■■■□□ 2.94
PABPN1-207ENST00000556821 CDK12Q9NYV4 1490 aaPredicted RBP33.43■■■□□ 2.94
PABPN1-207ENST00000556821 C19orf44Q9H6X5 657 aa33.42■■■□□ 2.94
PABPN1-207ENST00000556821 CADPS2Q86UW7 1296 aa33.41■■■□□ 2.94
PABPN1-207ENST00000556821 ADGRF5Q8IZF2 1346 aa33.4■■■□□ 2.94
PABPN1-207ENST00000556821 AHDC1Q5TGY3 1603 aaPredicted RBP33.39■■■□□ 2.93
PABPN1-207ENST00000556821 ASXL1Q8IXJ9 1541 aa33.38■■■□□ 2.93
PABPN1-207ENST00000556821 PIK3C2GO75747 1445 aa33.37■■■□□ 2.93
PABPN1-207ENST00000556821 PRAG1Q86YV5 1406 aa33.37■■■□□ 2.93
PABPN1-207ENST00000556821 KNDC1Q76NI1 1749 aa33.36■■■□□ 2.93
PABPN1-207ENST00000556821 MYOM2P54296 1465 aa33.36■■■□□ 2.93
PABPN1-207ENST00000556821 LAMC1P11047 1609 aa33.35■■■□□ 2.93
PABPN1-207ENST00000556821 NRXN1Q9ULB1 1477 aa33.35■■■□□ 2.93
PABPN1-207ENST00000556821 PTCH1Q13635 1447 aa33.34■■■□□ 2.93
PABPN1-207ENST00000556821 BRINP3Q76B58 766 aa33.33■■■□□ 2.93
PABPN1-207ENST00000556821 ATF3P18847 181 aa33.31■■■□□ 2.92
PABPN1-207ENST00000556821 C14orf37Q86TY3 774 aa33.3■■■□□ 2.92
PABPN1-207ENST00000556821 DCCP43146 1447 aa33.29■■■□□ 2.92
PABPN1-207ENST00000556821 SHPRHQ149N8 1683 aa33.29■■■□□ 2.92
PABPN1-207ENST00000556821 AFF2P51816 1311 aa33.28■■■□□ 2.92
PABPN1-207ENST00000556821 ADGRL3Q9HAR2 1447 aa33.28■■■□□ 2.92
PABPN1-207ENST00000556821 ROBO2Q9HCK4 1378 aa33.28■■■□□ 2.92
PABPN1-207ENST00000556821 NUTM2BA6NNL0 878 aaPredicted RBP33.27■■■□□ 2.92
PABPN1-207ENST00000556821 NUTM2EB1AL46 878 aaPredicted RBP33.27■■■□□ 2.92
PABPN1-207ENST00000556821 NUTM2AQ8IVF1 878 aaPredicted RBP33.27■■■□□ 2.92
PABPN1-207ENST00000556821 TECPR2O15040 1411 aa33.21■■■□□ 2.91
PABPN1-207ENST00000556821 RBM6P78332 1123 aaKnown RBP33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms