RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 GPRASP1Q5JY77 1395 aa21.86■■□□□ 1.09
PTPN21-208ENST00000556564 USP35Q9P2H5 1018 aa21.85■■□□□ 1.09
PTPN21-208ENST00000556564 PIP4K2BP78356 416 aa21.84■■□□□ 1.09
PTPN21-208ENST00000556564 SPRYD3Q8NCJ5 442 aa21.84■■□□□ 1.09
PTPN21-208ENST00000556564 FRAT2O75474 233 aaPredicted RBP21.83■■□□□ 1.09
PTPN21-208ENST00000556564 RAPGEF4Q8WZA2 1011 aa21.83■■□□□ 1.09
PTPN21-208ENST00000556564 GPATCH3Q96I76 525 aa21.83■■□□□ 1.09
PTPN21-208ENST00000556564 NUTM2BA6NNL0 878 aaPredicted RBP21.82■■□□□ 1.08
PTPN21-208ENST00000556564 NUTM2EB1AL46 878 aaPredicted RBP21.82■■□□□ 1.08
PTPN21-208ENST00000556564 TRIM6-TRIM34B2RNG4 842 aa21.82■■□□□ 1.08
PTPN21-208ENST00000556564 NUTM2AQ8IVF1 878 aaPredicted RBP21.82■■□□□ 1.08
PTPN21-208ENST00000556564 HMMRO75330 724 aa21.82■■□□□ 1.08
PTPN21-208ENST00000556564 HDAC5Q9UQL6 1122 aa21.82■■□□□ 1.08
PTPN21-208ENST00000556564 ERBINQ96RT1 1412 aa21.82■■□□□ 1.08
PTPN21-208ENST00000556564 ADGRL1O94910 1474 aa21.81■■□□□ 1.08
PTPN21-208ENST00000556564 RIPK4P57078 832 aa21.81■■□□□ 1.08
PTPN21-208ENST00000556564 PRKRIP1Q9H875 184 aaPredicted RBP21.81■■□□□ 1.08
PTPN21-208ENST00000556564 HSCBQ8IWL3 235 aa21.8■■□□□ 1.08
PTPN21-208ENST00000556564 APAF1O14727 1248 aa21.8■■□□□ 1.08
PTPN21-208ENST00000556564 STRN4Q9NRL3 753 aa21.79■■□□□ 1.08
PTPN21-208ENST00000556564 NBPF1Q3BBV0 1214 aa21.79■■□□□ 1.08
PTPN21-208ENST00000556564 SLC52A1Q9NWF4 448 aa21.79■■□□□ 1.08
PTPN21-208ENST00000556564 KIAA1107Q9UPP5 1409 aa21.79■■□□□ 1.08
PTPN21-208ENST00000556564 KIF7Q2M1P5 1343 aa21.78■■□□□ 1.08
PTPN21-208ENST00000556564 CDK19Q9BWU1 502 aa21.78■■□□□ 1.08
PTPN21-208ENST00000556564 CAMSAP2Q08AD1 1489 aa21.77■■□□□ 1.08
PTPN21-208ENST00000556564 TCERG1O14776 1098 aaKnown RBP21.77■■□□□ 1.08
PTPN21-208ENST00000556564 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.08
PTPN21-208ENST00000556564 KLHL34Q8N239 644 aa21.76■■□□□ 1.07
PTPN21-208ENST00000556564 CCDC141Q6ZP82 1450 aa21.76■■□□□ 1.07
PTPN21-208ENST00000556564 HFM1A2PYH4 1435 aa21.76■■□□□ 1.07
PTPN21-208ENST00000556564 PDE3BQ13370 1112 aa21.75■■□□□ 1.07
PTPN21-208ENST00000556564 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.75■■□□□ 1.07
PTPN21-208ENST00000556564 GNL2Q13823 731 aaKnown RBP21.74■■□□□ 1.07
PTPN21-208ENST00000556564 CFAP44Q96MT7 982 aa21.74■■□□□ 1.07
PTPN21-208ENST00000556564 CCDC7Q96M83 1385 aa21.73■■□□□ 1.07
PTPN21-208ENST00000556564 E9PSI1 815 aa21.72■■□□□ 1.07
PTPN21-208ENST00000556564 TSPYL4Q9UJ04 414 aa21.71■■□□□ 1.07
PTPN21-208ENST00000556564 NEXNQ0ZGT2 675 aa21.71■■□□□ 1.07
PTPN21-208ENST00000556564 CEBPAP49715 358 aaPredicted RBP21.71■■□□□ 1.07
PTPN21-208ENST00000556564 XPCQ01831 940 aaPredicted RBP21.71■■□□□ 1.07
PTPN21-208ENST00000556564 PLIN1O60240 522 aa21.7■■□□□ 1.06
PTPN21-208ENST00000556564 CABP1Q9NZU7 370 aa21.69■■□□□ 1.06
PTPN21-208ENST00000556564 RUNDC1Q96C34 613 aa21.69■■□□□ 1.06
PTPN21-208ENST00000556564 GOLGA6L4A6NEF3 574 aa21.69■■□□□ 1.06
PTPN21-208ENST00000556564 PLCB2Q00722 1185 aa21.69■■□□□ 1.06
PTPN21-208ENST00000556564 PTPN23Q9H3S7 1636 aa21.69■■□□□ 1.06
PTPN21-208ENST00000556564 C9orf78Q9NZ63 289 aaPredicted RBP21.68■■□□□ 1.06
PTPN21-208ENST00000556564 KIF21AQ7Z4S6 1674 aa21.68■■□□□ 1.06
PTPN21-208ENST00000556564 RTEL1-TNFRSF6BF6WH68 1400 aa21.67■■□□□ 1.06
PTPN21-208ENST00000556564 PTMAP06454 111 aaKnown RBP21.67■■□□□ 1.06
PTPN21-208ENST00000556564 MFAP1P55081 439 aaKnown RBP21.67■■□□□ 1.06
PTPN21-208ENST00000556564 CLSTN1O94985 981 aa21.66■■□□□ 1.06
PTPN21-208ENST00000556564 ANP32EQ9BTT0 268 aa21.66■■□□□ 1.06
PTPN21-208ENST00000556564 FANCAO15360 1455 aa21.66■■□□□ 1.06
PTPN21-208ENST00000556564 MTHFSP49914 203 aa21.65■■□□□ 1.06
PTPN21-208ENST00000556564 ZKSCAN2Q63HK3 967 aa21.65■■□□□ 1.06
PTPN21-208ENST00000556564 TOMM22Q9NS69 142 aa21.65■■□□□ 1.06
PTPN21-208ENST00000556564 HSP90B1P14625 803 aaKnown RBP21.65■■□□□ 1.06
PTPN21-208ENST00000556564 SLC12A5Q9H2X9 1139 aa21.64■■□□□ 1.06
PTPN21-208ENST00000556564 AIMP1Q12904 312 aaKnown RBP21.64■■□□□ 1.05
PTPN21-208ENST00000556564 FBXO31Q5XUX0 539 aaPredicted RBP21.64■■□□□ 1.05
PTPN21-208ENST00000556564 TRIM44Q96DX7 344 aaPredicted RBP21.63■■□□□ 1.05
PTPN21-208ENST00000556564 DENND4BO75064 1496 aaPredicted RBP21.63■■□□□ 1.05
PTPN21-208ENST00000556564 FBXW7Q969H0 707 aa21.63■■□□□ 1.05
PTPN21-208ENST00000556564 SMG6Q86US8 1419 aaKnown RBP21.63■■□□□ 1.05
PTPN21-208ENST00000556564 DDX58O95786 925 aaKnown RBP21.62■■□□□ 1.05
PTPN21-208ENST00000556564 FKBP5Q13451 457 aaPredicted RBP21.62■■□□□ 1.05
PTPN21-208ENST00000556564 RPGRIP1LQ68CZ1 1315 aa21.62■■□□□ 1.05
PTPN21-208ENST00000556564 TOM1L2Q6ZVM7 507 aa21.61■■□□□ 1.05
PTPN21-208ENST00000556564 NBPF8Q3BBV2 869 aa21.6■■□□□ 1.05
PTPN21-208ENST00000556564 NOL8Q76FK4 1167 aaKnown RBP21.6■■□□□ 1.05
PTPN21-208ENST00000556564 RILPL2Q969X0 211 aa21.6■■□□□ 1.05
PTPN21-208ENST00000556564 CNTLNQ9NXG0 1405 aa21.6■■□□□ 1.05
PTPN21-208ENST00000556564 RBM42Q9BTD8 480 aaKnown RBP21.59■■□□□ 1.05
PTPN21-208ENST00000556564 RBM33Q96EV2 1170 aaKnown RBP21.59■■□□□ 1.05
PTPN21-208ENST00000556564 ANKRD45Q5TZF3 282 aa21.59■■□□□ 1.05
PTPN21-208ENST00000556564 COG6Q9Y2V7 657 aa21.59■■□□□ 1.05
PTPN21-208ENST00000556564 AKNAQ7Z591 1439 aa21.59■■□□□ 1.05
PTPN21-208ENST00000556564 ABCC5O15440 1437 aa21.58■■□□□ 1.05
PTPN21-208ENST00000556564 WASHC2AQ641Q2 1341 aa21.58■■□□□ 1.04
PTPN21-208ENST00000556564 RIC3Q7Z5B4 369 aa21.57■■□□□ 1.04
PTPN21-208ENST00000556564 GNAI1P63096 354 aa21.57■■□□□ 1.04
PTPN21-208ENST00000556564 NOP58Q9Y2X3 529 aaKnown RBP21.57■■□□□ 1.04
PTPN21-208ENST00000556564 WAPLQ7Z5K2 1190 aa21.57■■□□□ 1.04
PTPN21-208ENST00000556564 DDX54Q8TDD1 881 aaKnown RBP21.56■■□□□ 1.04
PTPN21-208ENST00000556564 PLEKHO1Q53GL0 409 aaPredicted RBP21.56■■□□□ 1.04
PTPN21-208ENST00000556564 ZNF692Q9BU19 519 aaPredicted RBP21.56■■□□□ 1.04
PTPN21-208ENST00000556564 RAPGEF6Q8TEU7 1601 aa21.56■■□□□ 1.04
PTPN21-208ENST00000556564 TATP17735 454 aaPredicted RBP21.56■■□□□ 1.04
PTPN21-208ENST00000556564 THOC2Q8NI27 1593 aaKnown RBP21.56■■□□□ 1.04
PTPN21-208ENST00000556564 ASXL2Q76L83 1435 aa21.55■■□□□ 1.04
PTPN21-208ENST00000556564 ROCK1Q13464 1354 aa21.55■■□□□ 1.04
PTPN21-208ENST00000556564 CRBNQ96SW2 442 aa21.55■■□□□ 1.04
PTPN21-208ENST00000556564 ANKRD30BQ9BXX2 1392 aa21.55■■□□□ 1.04
PTPN21-208ENST00000556564 FAM177BA6PVY3 158 aa21.54■■□□□ 1.04
PTPN21-208ENST00000556564 VPS37DQ86XT2 251 aa21.54■■□□□ 1.04
PTPN21-208ENST00000556564 PRKAR2BP31323 418 aa21.53■■□□□ 1.04
PTPN21-208ENST00000556564 PPP2R1AP30153 589 aa21.52■■□□□ 1.04
PTPN21-208ENST00000556564 PRDM11Q9NQV5 511 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms