RNA–Protein interactions for RNA: ENST00000556416.1

CLMN-205, Transcript of calmin, human

TSL 2

Gene CLMN, Length 1,772 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLMN-205	ENST00000556416	STAG3	Q9UJ98	1225 aa		33.44	■■■□□ 2.94
CLMN-205	ENST00000556416	RPGRIP1L	Q68CZ1	1315 aa		33.44	■■■□□ 2.94
CLMN-205	ENST00000556416	RALGAPB	Q86X10	1494 aa		33.43	■■■□□ 2.94
CLMN-205	ENST00000556416	NRXN1	Q9ULB1	1477 aa		33.39	■■■□□ 2.94
CLMN-205	ENST00000556416	SETD1B	Q9UPS6	1966 aa	Known RBP	33.36	■■■□□ 2.93
CLMN-205	ENST00000556416	KIAA1210	Q9ULL0	1709 aa		33.35	■■■□□ 2.93
CLMN-205	ENST00000556416	ADGRF5	Q8IZF2	1346 aa		33.35	■■■□□ 2.93
CLMN-205	ENST00000556416	ZNF142	P52746	1687 aa	Predicted RBP	33.35	■■■□□ 2.93
CLMN-205	ENST00000556416	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.34	■■■□□ 2.93
CLMN-205	ENST00000556416	ZFYVE9	O95405	1425 aa		33.31	■■■□□ 2.92
CLMN-205	ENST00000556416	RIMS2	Q9UQ26	1411 aa		33.31	■■■□□ 2.92
CLMN-205	ENST00000556416	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.3	■■■□□ 2.92
CLMN-205	ENST00000556416	PIK3C2G	O75747	1445 aa		33.3	■■■□□ 2.92
CLMN-205	ENST00000556416	VGF	O15240	615 aa	Predicted RBP	33.29	■■■□□ 2.92
CLMN-205	ENST00000556416	LAMC1	P11047	1609 aa		33.28	■■■□□ 2.92
CLMN-205	ENST00000556416	ROCK2	O75116	1388 aa	Known RBP	33.27	■■■□□ 2.92
CLMN-205	ENST00000556416	KDM4F	A0A1W2PPD8	638 aa		33.26	■■■□□ 2.92
CLMN-205	ENST00000556416	TMEM2	Q9UHN6	1383 aa		33.24	■■■□□ 2.91
CLMN-205	ENST00000556416	GPRASP1	Q5JY77	1395 aa		33.23	■■■□□ 2.91
CLMN-205	ENST00000556416	NBPF1	Q3BBV0	1214 aa		33.23	■■■□□ 2.91
CLMN-205	ENST00000556416	SLIT1	O75093	1534 aa		33.22	■■■□□ 2.91
CLMN-205	ENST00000556416	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.2	■■■□□ 2.91
CLMN-205	ENST00000556416	CARD11	Q9BXL7	1154 aa		33.2	■■■□□ 2.91
CLMN-205	ENST00000556416	ARHGAP23	Q9P227	1491 aa		33.19	■■■□□ 2.9
CLMN-205	ENST00000556416	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.19	■■■□□ 2.9
CLMN-205	ENST00000556416	CFAP70	Q5T0N1	1121 aa		33.18	■■■□□ 2.9
CLMN-205	ENST00000556416	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.17	■■■□□ 2.9
CLMN-205	ENST00000556416	SETBP1	Q9Y6X0	1596 aa		33.17	■■■□□ 2.9
CLMN-205	ENST00000556416	IQGAP1	P46940	1657 aa		33.17	■■■□□ 2.9
CLMN-205	ENST00000556416	EIF4G2	P78344	907 aa	Known RBP eCLIP	33.16	■■■□□ 2.9
CLMN-205	ENST00000556416	USP47	Q96K76	1375 aa		33.16	■■■□□ 2.9
CLMN-205	ENST00000556416	HSPA5	P11021	654 aa	Known RBP	33.14	■■■□□ 2.9
CLMN-205	ENST00000556416	HDGF	P51858	240 aa	Known RBP	33.14	■■■□□ 2.9
CLMN-205	ENST00000556416	C14orf93	Q9H972	538 aa	Known RBP	33.14	■■■□□ 2.9
CLMN-205	ENST00000556416	NRXN3	Q9Y4C0	1643 aa		33.13	■■■□□ 2.89
CLMN-205	ENST00000556416	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.12	■■■□□ 2.89
CLMN-205	ENST00000556416	ALK	Q9UM73	1620 aa		33.11	■■■□□ 2.89
CLMN-205	ENST00000556416	ADGRB1	O14514	1584 aa		33.11	■■■□□ 2.89
CLMN-205	ENST00000556416	SETD1A	O15047	1707 aa	Known RBP	33.11	■■■□□ 2.89
CLMN-205	ENST00000556416	SENP3	Q9H4L4	574 aa	Predicted RBP	33.1	■■■□□ 2.89
CLMN-205	ENST00000556416	LTK	P29376	864 aa		33.07	■■■□□ 2.88
CLMN-205	ENST00000556416	ASXL1	Q8IXJ9	1541 aa		33.07	■■■□□ 2.88
CLMN-205	ENST00000556416	EID1	Q9Y6B2	187 aa		33.06	■■■□□ 2.88
CLMN-205	ENST00000556416	TXNDC2	Q86VQ3	553 aa		33.06	■■■□□ 2.88
CLMN-205	ENST00000556416	SCAF11	Q99590	1463 aa	Known RBP	33.05	■■■□□ 2.88
CLMN-205	ENST00000556416	PLEKHG1	Q9ULL1	1385 aa		33.04	■■■□□ 2.88
CLMN-205	ENST00000556416	POLR1A	O95602	1720 aa	Predicted RBP	33	■■■□□ 2.87
CLMN-205	ENST00000556416	TMEM132E	Q6IEE7	984 aa		32.99	■■■□□ 2.87
CLMN-205	ENST00000556416	ADAMTS13	Q76LX8	1427 aa		32.96	■■■□□ 2.87
CLMN-205	ENST00000556416	ST20-MTHFS	A0A0A6YYL1	179 aa		32.96	■■■□□ 2.87
CLMN-205	ENST00000556416	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.95	■■■□□ 2.87
CLMN-205	ENST00000556416	BCAN	Q96GW7	911 aa		32.95	■■■□□ 2.87
CLMN-205	ENST00000556416	EIF3A	Q14152	1382 aa	Known RBP	32.93	■■■□□ 2.86
CLMN-205	ENST00000556416	ANKLE2	Q86XL3	938 aa		32.93	■■■□□ 2.86
CLMN-205	ENST00000556416	DIP2A	Q14689	1571 aa		32.91	■■■□□ 2.86
CLMN-205	ENST00000556416	MED14	O60244	1454 aa		32.91	■■■□□ 2.86
CLMN-205	ENST00000556416	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.9	■■■□□ 2.86
CLMN-205	ENST00000556416	LMTK3	Q96Q04	1460 aa		32.89	■■■□□ 2.86
CLMN-205	ENST00000556416	MET	P08581	1390 aa		32.88	■■■□□ 2.85
CLMN-205	ENST00000556416	TRAK1	Q9UPV9	953 aa		32.88	■■■□□ 2.85
CLMN-205	ENST00000556416	QRICH2	Q9H0J4	1663 aa		32.86	■■■□□ 2.85
CLMN-205	ENST00000556416	KNDC1	Q76NI1	1749 aa		32.85	■■■□□ 2.85
CLMN-205	ENST00000556416	SLC26A8	Q96RN1	970 aa		32.83	■■■□□ 2.85
CLMN-205	ENST00000556416	STK26	Q9P289	416 aa		32.83	■■■□□ 2.85
CLMN-205	ENST00000556416	LRPPRC	P42704	1394 aa	Known RBP	32.83	■■■□□ 2.85
CLMN-205	ENST00000556416	C11orf95	C9JLR9	678 aa	Predicted RBP	32.82	■■■□□ 2.84
CLMN-205	ENST00000556416	TESK2	Q96S53	571 aa		32.82	■■■□□ 2.84
CLMN-205	ENST00000556416	NPHP4	O75161	1426 aa	Predicted RBP	32.8	■■■□□ 2.84
CLMN-205	ENST00000556416	DLC1	Q96QB1	1528 aa		32.8	■■■□□ 2.84
CLMN-205	ENST00000556416	TBX22	Q9Y458	520 aa		32.8	■■■□□ 2.84
CLMN-205	ENST00000556416	WASHC2A	Q641Q2	1341 aa		32.79	■■■□□ 2.84
CLMN-205	ENST00000556416	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.78	■■■□□ 2.84
CLMN-205	ENST00000556416	NCKAP5L	Q9HCH0	1330 aa		32.78	■■■□□ 2.84
CLMN-205	ENST00000556416	CCDC7	Q96M83	1385 aa		32.78	■■■□□ 2.84
CLMN-205	ENST00000556416	HSPA2	P54652	639 aa		32.77	■■■□□ 2.84
CLMN-205	ENST00000556416	ABCC11	Q96J66	1382 aa		32.76	■■■□□ 2.84
CLMN-205	ENST00000556416	CPS1	P31327	1500 aa		32.76	■■■□□ 2.83
CLMN-205	ENST00000556416	KIF7	Q2M1P5	1343 aa		32.75	■■■□□ 2.83
CLMN-205	ENST00000556416	TECPR2	O15040	1411 aa		32.74	■■■□□ 2.83
CLMN-205	ENST00000556416	SBNO2	Q9Y2G9	1366 aa		32.74	■■■□□ 2.83
CLMN-205	ENST00000556416	PTPRU	Q92729	1446 aa		32.73	■■■□□ 2.83
CLMN-205	ENST00000556416	DISP3	Q9P2K9	1392 aa		32.72	■■■□□ 2.83
CLMN-205	ENST00000556416	XRN1	Q8IZH2	1706 aa	Known RBP	32.72	■■■□□ 2.83
CLMN-205	ENST00000556416	CHD2	O14647	1828 aa	Known RBP	32.7	■■■□□ 2.83
CLMN-205	ENST00000556416	STRC	Q7RTU9	1775 aa		32.7	■■■□□ 2.83
CLMN-205	ENST00000556416	TMF1	P82094	1093 aa		32.69	■■■□□ 2.82
CLMN-205	ENST00000556416	PIK3R4	Q99570	1358 aa		32.68	■■■□□ 2.82
CLMN-205	ENST00000556416	PRAM1	Q96QH2	718 aa		32.68	■■■□□ 2.82
CLMN-205	ENST00000556416	POGK	Q9P215	609 aa		32.66	■■■□□ 2.82
CLMN-205	ENST00000556416	FAM135B	Q49AJ0	1406 aa		32.66	■■■□□ 2.82
CLMN-205	ENST00000556416	DDX10	Q13206	875 aa	Known RBP	32.65	■■■□□ 2.82
CLMN-205	ENST00000556416	DIEXF	Q68CQ4	756 aa	Known RBP	32.65	■■■□□ 2.82
CLMN-205	ENST00000556416	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.64	■■■□□ 2.82
CLMN-205	ENST00000556416	SLC24A1	O60721	1099 aa		32.63	■■■□□ 2.81
CLMN-205	ENST00000556416	POLR3GL	Q9BT43	218 aa		32.63	■■■□□ 2.81
CLMN-205	ENST00000556416	PLEKHH1	Q9ULM0	1364 aa		32.63	■■■□□ 2.81
CLMN-205	ENST00000556416	AMOTL2	Q9Y2J4	779 aa		32.63	■■■□□ 2.81
CLMN-205	ENST00000556416	ROBO2	Q9HCK4	1378 aa		32.62	■■■□□ 2.81
CLMN-205	ENST00000556416	SIRT1	Q96EB6	747 aa		32.62	■■■□□ 2.81
CLMN-205	ENST00000556416	WAPL	Q7Z5K2	1190 aa		32.61	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms