RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 SHPRHQ149N8 1683 aa24.09■■□□□ 1.45
BRF1-220ENST00000552127 IDI1Q13907 227 aa24.05■■□□□ 1.44
BRF1-220ENST00000552127 DUOX2Q9NRD8 1548 aa24.05■■□□□ 1.44
BRF1-220ENST00000552127 AHDC1Q5TGY3 1603 aaPredicted RBP24.03■■□□□ 1.44
BRF1-220ENST00000552127 BCANQ96GW7 911 aa24.02■■□□□ 1.44
BRF1-220ENST00000552127 CHD2O14647 1828 aaKnown RBP24.02■■□□□ 1.44
BRF1-220ENST00000552127 NUTM2BA6NNL0 878 aaPredicted RBP23.99■■□□□ 1.43
BRF1-220ENST00000552127 NUTM2EB1AL46 878 aaPredicted RBP23.99■■□□□ 1.43
BRF1-220ENST00000552127 NUTM2AQ8IVF1 878 aaPredicted RBP23.99■■□□□ 1.43
BRF1-220ENST00000552127 AFF2P51816 1311 aa23.99■■□□□ 1.43
BRF1-220ENST00000552127 RGS12O14924 1447 aa23.98■■□□□ 1.43
BRF1-220ENST00000552127 ABCC5O15440 1437 aa23.97■■□□□ 1.43
BRF1-220ENST00000552127 DAPK1P53355 1430 aa23.97■■□□□ 1.43
BRF1-220ENST00000552127 DIP2AQ14689 1571 aa23.97■■□□□ 1.43
BRF1-220ENST00000552127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.97■■□□□ 1.435e-6■■■□□ 17
BRF1-220ENST00000552127 ADGRB3O60242 1522 aa23.96■■□□□ 1.43
BRF1-220ENST00000552127 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.95■■□□□ 1.42
BRF1-220ENST00000552127 NCOA3Q9Y6Q9 1424 aa23.94■■□□□ 1.42
BRF1-220ENST00000552127 C14orf37Q86TY3 774 aa23.94■■□□□ 1.42
BRF1-220ENST00000552127 ERBINQ96RT1 1412 aa23.93■■□□□ 1.42
BRF1-220ENST00000552127 KIF15Q9NS87 1388 aa23.93■■□□□ 1.42
BRF1-220ENST00000552127 CADPS2Q86UW7 1296 aa23.92■■□□□ 1.42
BRF1-220ENST00000552127 NUTM2DQ5VT03 806 aaPredicted RBP23.91■■□□□ 1.42
BRF1-220ENST00000552127 KANK1Q14678 1352 aa23.91■■□□□ 1.42
BRF1-220ENST00000552127 RBM6P78332 1123 aaKnown RBP23.9■■□□□ 1.42
BRF1-220ENST00000552127 PLEKHG1Q9ULL1 1385 aa23.9■■□□□ 1.42
BRF1-220ENST00000552127 ATF3P18847 181 aa23.89■■□□□ 1.41
BRF1-220ENST00000552127 QTRT2Q9H974 415 aaKnown RBP23.89■■□□□ 1.41
BRF1-220ENST00000552127 NOS1P29475 1434 aa23.88■■□□□ 1.41
BRF1-220ENST00000552127 C19orf44Q9H6X5 657 aa23.88■■□□□ 1.41
BRF1-220ENST00000552127 RRP7BPQ9NSQ0 103 aa23.88■■□□□ 1.41
BRF1-220ENST00000552127 LMTK2Q8IWU2 1503 aa23.88■■□□□ 1.41
BRF1-220ENST00000552127 ZFYVE9O95405 1425 aa23.87■■□□□ 1.41
BRF1-220ENST00000552127 BRINP3Q76B58 766 aa23.87■■□□□ 1.41
BRF1-220ENST00000552127 ZRANB1Q9UGI0 708 aa23.86■■□□□ 1.41
BRF1-220ENST00000552127 MYO5BQ9ULV0 1848 aa23.86■■□□□ 1.41
BRF1-220ENST00000552127 C8orf37Q96NL8 207 aa23.85■■□□□ 1.41
BRF1-220ENST00000552127 SETBP1Q9Y6X0 1596 aa23.85■■□□□ 1.41
BRF1-220ENST00000552127 PPP1R15AO75807 674 aaPredicted RBP23.84■■□□□ 1.41
BRF1-220ENST00000552127 SLC52A1Q9NWF4 448 aa23.84■■□□□ 1.41
BRF1-220ENST00000552127 ATAD2Q6PL18 1390 aa23.83■■□□□ 1.41
BRF1-220ENST00000552127 TBX22Q9Y458 520 aa23.83■■□□□ 1.41
BRF1-220ENST00000552127 SETD5Q9C0A6 1442 aa23.83■■□□□ 1.4
BRF1-220ENST00000552127 ADGRL2O95490 1459 aa23.82■■□□□ 1.4
BRF1-220ENST00000552127 FOXD1Q16676 465 aa23.82■■□□□ 1.4
BRF1-220ENST00000552127 ANKRD30AQ9BXX3 1397 aa23.81■■□□□ 1.4
BRF1-220ENST00000552127 RIMS2Q9UQ26 1411 aa23.81■■□□□ 1.4
BRF1-220ENST00000552127 ASXL1Q8IXJ9 1541 aa23.79■■□□□ 1.4
BRF1-220ENST00000552127 GCC2Q8IWJ2 1684 aa23.79■■□□□ 1.4
BRF1-220ENST00000552127 HDGFP51858 240 aaKnown RBP23.78■■□□□ 1.4
BRF1-220ENST00000552127 FAM50AQ14320 339 aaKnown RBP23.78■■□□□ 1.4
BRF1-220ENST00000552127 EP400Q96L91 3159 aa23.78■■□□□ 1.4
BRF1-220ENST00000552127 NHSL1Q5SYE7 1610 aa23.77■■□□□ 1.4
BRF1-220ENST00000552127 NGLY1Q96IV0 654 aa23.77■■□□□ 1.4
BRF1-220ENST00000552127 ADAMTS13Q76LX8 1427 aa23.76■■□□□ 1.39
BRF1-220ENST00000552127 LRRC59Q96AG4 307 aaKnown RBP23.76■■□□□ 1.39
BRF1-220ENST00000552127 CHIC2Q9UKJ5 165 aa23.76■■□□□ 1.39
BRF1-220ENST00000552127 TMEM131LA2VDJ0 1609 aa23.74■■□□□ 1.39
BRF1-220ENST00000552127 PNPLA6Q8IY17 1366 aa23.73■■□□□ 1.39
BRF1-220ENST00000552127 PIK3R4Q99570 1358 aa23.73■■□□□ 1.39
BRF1-220ENST00000552127 DCCP43146 1447 aa23.71■■□□□ 1.39
BRF1-220ENST00000552127 MST1RQ04912 1400 aa23.69■■□□□ 1.38
BRF1-220ENST00000552127 ADAMTS2O95450 1211 aa23.69■■□□□ 1.38
BRF1-220ENST00000552127 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.69■■□□□ 1.38
BRF1-220ENST00000552127 DDX17Q92841 729 aaKnown RBP23.69■■□□□ 1.38
BRF1-220ENST00000552127 AMOTL2Q9Y2J4 779 aa23.69■■□□□ 1.38
BRF1-220ENST00000552127 RPRD2Q5VT52 1461 aaKnown RBP23.68■■□□□ 1.38
BRF1-220ENST00000552127 PTPRUQ92729 1446 aa23.67■■□□□ 1.38
BRF1-220ENST00000552127 UNC13BO14795 1591 aa23.66■■□□□ 1.38
BRF1-220ENST00000552127 TRPM2O94759 1503 aa23.66■■□□□ 1.38
BRF1-220ENST00000552127 PPARGC1BQ86YN6 1023 aaKnown RBP23.65■■□□□ 1.38
BRF1-220ENST00000552127 USP21Q9UK80 565 aa23.65■■□□□ 1.38
BRF1-220ENST00000552127 ANKRD50Q9ULJ7 1429 aa23.65■■□□□ 1.38
BRF1-220ENST00000552127 CCDC125Q86Z20 511 aa23.64■■□□□ 1.37
BRF1-220ENST00000552127 TRPC5Q9UL62 973 aaPredicted RBP23.64■■□□□ 1.37
BRF1-220ENST00000552127 CHGAP10645 457 aaKnown RBP23.63■■□□□ 1.37
BRF1-220ENST00000552127 ROCK1Q13464 1354 aa23.62■■□□□ 1.37
BRF1-220ENST00000552127 XRN1Q8IZH2 1706 aaKnown RBP23.59■■□□□ 1.37
BRF1-220ENST00000552127 ATRNO75882 1429 aa23.59■■□□□ 1.37
BRF1-220ENST00000552127 FNBP4Q8N3X1 1017 aaPredicted RBP23.57■■□□□ 1.36
BRF1-220ENST00000552127 RRBP1Q9P2E9 1410 aaKnown RBP23.56■■□□□ 1.36
BRF1-220ENST00000552127 IQGAP3Q86VI3 1631 aa23.55■■□□□ 1.36
BRF1-220ENST00000552127 PTCH1Q13635 1447 aa23.53■■□□□ 1.36
BRF1-220ENST00000552127 LRP5O75197 1615 aa23.53■■□□□ 1.36
BRF1-220ENST00000552127 NRXN3Q9Y4C0 1643 aa23.51■■□□□ 1.35
BRF1-220ENST00000552127 ADGRL3Q9HAR2 1447 aa23.51■■□□□ 1.35
BRF1-220ENST00000552127 E9PCH4 1651 aa23.51■■□□□ 1.35
BRF1-220ENST00000552127 LAMC1P11047 1609 aa23.51■■□□□ 1.35
BRF1-220ENST00000552127 NALCNQ8IZF0 1738 aa23.5■■□□□ 1.35
BRF1-220ENST00000552127 ITGAEP38570 1179 aa23.5■■□□□ 1.35
BRF1-220ENST00000552127 SOS2Q07890 1332 aaPredicted RBP23.48■■□□□ 1.35
BRF1-220ENST00000552127 BLMP54132 1417 aaPredicted RBP23.48■■□□□ 1.35
BRF1-220ENST00000552127 C1orf167Q5SNV9 1468 aa23.48■■□□□ 1.35
BRF1-220ENST00000552127 BCL9LQ86UU0 1499 aa23.47■■□□□ 1.35
BRF1-220ENST00000552127 COL22A1Q8NFW1 1626 aaPredicted RBP23.45■■□□□ 1.34
BRF1-220ENST00000552127 METP08581 1390 aa23.45■■□□□ 1.34
BRF1-220ENST00000552127 DEFB132Q7Z7B7 95 aa23.45■■□□□ 1.34
BRF1-220ENST00000552127 GJD4Q96KN9 370 aaPredicted RBP23.44■■□□□ 1.34
BRF1-220ENST00000552127 ORAI2Q96SN7 254 aa23.42■■□□□ 1.34
BRF1-220ENST00000552127 MARF1Q9Y4F3 1742 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms