RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 TRIM66O15016 1216 aa7.43□□□□□ -1.22
LSM3P2-201ENST00000551246 HRO43593 1189 aa7.43□□□□□ -1.22
LSM3P2-201ENST00000551246 ADGRD1Q6QNK2 874 aa7.43□□□□□ -1.22
LSM3P2-201ENST00000551246 KRI1Q8N9T8 703 aaKnown RBP7.43□□□□□ -1.22
LSM3P2-201ENST00000551246 EYA1Q99502 592 aa7.43□□□□□ -1.22
LSM3P2-201ENST00000551246 KIAA1468Q9P260 1216 aa7.43□□□□□ -1.22
LSM3P2-201ENST00000551246 RABGEF1Q9UJ41 708 aa7.43□□□□□ -1.22
LSM3P2-201ENST00000551246 WASHC2AQ641Q2 1341 aa7.43□□□□□ -1.22
LSM3P2-201ENST00000551246 NUDT18Q6ZVK8 323 aa7.42□□□□□ -1.22
LSM3P2-201ENST00000551246 TATDN2Q93075 761 aa7.42□□□□□ -1.22
LSM3P2-201ENST00000551246 DAXXQ9UER7 740 aaPredicted RBP7.42□□□□□ -1.22
LSM3P2-201ENST00000551246 CEP162Q5TB80 1403 aa7.42□□□□□ -1.22
LSM3P2-201ENST00000551246 EIF4G1Q04637 1599 aaKnown RBP7.42□□□□□ -1.22
LSM3P2-201ENST00000551246 NBPF26B4DH59 902 aa7.41□□□□□ -1.22
LSM3P2-201ENST00000551246 SMAPO00193 183 aa7.41□□□□□ -1.22
LSM3P2-201ENST00000551246 EIF5BO60841 1220 aaKnown RBP7.41□□□□□ -1.22
LSM3P2-201ENST00000551246 AMHR2Q16671 573 aa7.41□□□□□ -1.22
LSM3P2-201ENST00000551246 PNMA3Q9UL41 463 aa7.41□□□□□ -1.22
LSM3P2-201ENST00000551246 OATP04181 439 aa7.4□□□□□ -1.22
LSM3P2-201ENST00000551246 PACS2Q86VP3 889 aa7.4□□□□□ -1.22
LSM3P2-201ENST00000551246 SEPT9Q9UHD8 586 aaPredicted RBP7.4□□□□□ -1.22
LSM3P2-201ENST00000551246 WASHC2CQ9Y4E1 1318 aa7.4□□□□□ -1.22
LSM3P2-201ENST00000551246 DHX57Q6P158 1386 aaKnown RBP7.4□□□□□ -1.22
LSM3P2-201ENST00000551246 CCER2I3L3R5 266 aa7.39□□□□□ -1.23
LSM3P2-201ENST00000551246 RBM46Q8TBY0 533 aaKnown RBP7.39□□□□□ -1.23
LSM3P2-201ENST00000551246 NLRP7Q8WX94 980 aa7.39□□□□□ -1.23
LSM3P2-201ENST00000551246 TMUB1Q9BVT8 246 aa7.39□□□□□ -1.23
LSM3P2-201ENST00000551246 PDE4DQ08499 809 aa7.38□□□□□ -1.23
LSM3P2-201ENST00000551246 ANKRD13DQ6ZTN6 518 aa7.38□□□□□ -1.23
LSM3P2-201ENST00000551246 REPIN1Q9BWE0 567 aaKnown RBP7.38□□□□□ -1.23
LSM3P2-201ENST00000551246 CUX2O14529 1486 aa7.37□□□□□ -1.23
LSM3P2-201ENST00000551246 RCCD1A6NED2 376 aa7.37□□□□□ -1.23
LSM3P2-201ENST00000551246 BRPF1P55201 1214 aaPredicted RBP7.37□□□□□ -1.23
LSM3P2-201ENST00000551246 PARP9Q8IXQ6 854 aa7.37□□□□□ -1.23
LSM3P2-201ENST00000551246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.36□□□□□ -1.23
LSM3P2-201ENST00000551246 DNAJB2P25686 324 aa7.36□□□□□ -1.23
LSM3P2-201ENST00000551246 FAM98CQ17RN3 349 aaKnown RBP7.36□□□□□ -1.23
LSM3P2-201ENST00000551246 LAPTM4BQ86VI4 370 aa7.36□□□□□ -1.23
LSM3P2-201ENST00000551246 PKNOX2Q96KN3 472 aa7.36□□□□□ -1.23
LSM3P2-201ENST00000551246 NBPF3Q9H094 633 aa7.36□□□□□ -1.23
LSM3P2-201ENST00000551246 TMEM134Q9H6X4 195 aa7.36□□□□□ -1.23
LSM3P2-201ENST00000551246 IL27Q8NEV9 243 aa7.35□□□□□ -1.23
LSM3P2-201ENST00000551246 CCDC136Q96JN2 1154 aa7.35□□□□□ -1.23
LSM3P2-201ENST00000551246 CDK11AQ9UQ88 783 aaPredicted RBP7.35□□□□□ -1.23
LSM3P2-201ENST00000551246 NOP58Q9Y2X3 529 aaKnown RBP7.35□□□□□ -1.23
LSM3P2-201ENST00000551246 NEFLP07196 543 aa7.34□□□□□ -1.23
LSM3P2-201ENST00000551246 MDM2Q00987 491 aaPredicted RBP7.34□□□□□ -1.23
LSM3P2-201ENST00000551246 GPBP1L1Q9HC44 474 aaPredicted RBP7.34□□□□□ -1.23
LSM3P2-201ENST00000551246 EEA1Q15075 1411 aa7.34□□□□□ -1.23
LSM3P2-201ENST00000551246 PPP1R15AO75807 674 aaPredicted RBP7.33□□□□□ -1.24
LSM3P2-201ENST00000551246 MRPL50Q8N5N7 158 aaKnown RBP7.33□□□□□ -1.24
LSM3P2-201ENST00000551246 PCDH10Q9P2E7 1040 aa7.33□□□□□ -1.24
LSM3P2-201ENST00000551246 CLCN1P35523 988 aa7.32□□□□□ -1.24
LSM3P2-201ENST00000551246 GIGYF2Q6Y7W6 1299 aaKnown RBP7.32□□□□□ -1.24
LSM3P2-201ENST00000551246 ZFRQ96KR1 1074 aaKnown RBP7.32□□□□□ -1.24
LSM3P2-201ENST00000551246 GPCPD1Q9NPB8 672 aa7.32□□□□□ -1.24
LSM3P2-201ENST00000551246 ITGAEP38570 1179 aa7.31□□□□□ -1.24
LSM3P2-201ENST00000551246 TTLL12Q14166 644 aaPredicted RBP7.31□□□□□ -1.24
LSM3P2-201ENST00000551246 NEUROD2Q15784 382 aa7.31□□□□□ -1.24
LSM3P2-201ENST00000551246 SWT1Q5T5J6 900 aaKnown RBP7.31□□□□□ -1.24
LSM3P2-201ENST00000551246 MS4A1P11836 297 aa7.3□□□□□ -1.24
LSM3P2-201ENST00000551246 SAMD7Q7Z3H4 446 aa7.3□□□□□ -1.24
LSM3P2-201ENST00000551246 KDM4CQ9H3R0 1056 aa7.3□□□□□ -1.24
LSM3P2-201ENST00000551246 FAM217BQ9NTX9 383 aaPredicted RBP7.3□□□□□ -1.24
LSM3P2-201ENST00000551246 PPP4R2Q9NY27 417 aa7.29□□□□□ -1.24
LSM3P2-201ENST00000551246 USP35Q9P2H5 1018 aa7.29□□□□□ -1.24
LSM3P2-201ENST00000551246 NCAPD3P42695 1498 aa7.29□□□□□ -1.24
LSM3P2-201ENST00000551246 NACADO15069 1562 aa7.28□□□□□ -1.24
LSM3P2-201ENST00000551246 SLC10A3P09131 477 aa7.27□□□□□ -1.25
LSM3P2-201ENST00000551246 SPNS2Q8IVW8 549 aa7.27□□□□□ -1.25
LSM3P2-201ENST00000551246 SOWAHBA6NEL2 793 aa7.26□□□□□ -1.25
LSM3P2-201ENST00000551246 CD46P15529 392 aa7.26□□□□□ -1.25
LSM3P2-201ENST00000551246 SSTR3P32745 418 aaPredicted RBP7.26□□□□□ -1.25
LSM3P2-201ENST00000551246 IPO9Q96P70 1041 aaKnown RBP7.26□□□□□ -1.25
LSM3P2-201ENST00000551246 BCAMP50895 628 aa7.25□□□□□ -1.25
LSM3P2-201ENST00000551246 ANKK1Q8NFD2 765 aa7.25□□□□□ -1.25
LSM3P2-201ENST00000551246 WNT2BQ93097 391 aa7.25□□□□□ -1.25
LSM3P2-201ENST00000551246 LRCH3Q96II8 777 aa7.25□□□□□ -1.25
LSM3P2-201ENST00000551246 FAM117AQ9C073 453 aa7.25□□□□□ -1.25
LSM3P2-201ENST00000551246 RSPH6AQ9H0K4 717 aa7.25□□□□□ -1.25
LSM3P2-201ENST00000551246 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.25□□□□□ -1.25
LSM3P2-201ENST00000551246 VPS8Q8N3P4 1428 aa7.25□□□□□ -1.25
LSM3P2-201ENST00000551246 GOLGA3Q08378 1498 aa7.24□□□□□ -1.25
LSM3P2-201ENST00000551246 PLEKHG3A1L390 1219 aa7.24□□□□□ -1.25
LSM3P2-201ENST00000551246 DDX11L8A8MPP1 907 aa7.24□□□□□ -1.25
LSM3P2-201ENST00000551246 THSD4Q6ZMP0 1018 aa7.24□□□□□ -1.25
LSM3P2-201ENST00000551246 SLF2Q8IX21 1173 aa7.24□□□□□ -1.25
LSM3P2-201ENST00000551246 STAC3Q96MF2 364 aa7.24□□□□□ -1.25
LSM3P2-201ENST00000551246 CLIP1P30622 1438 aa7.24□□□□□ -1.25
LSM3P2-201ENST00000551246 GOLGA8CPA6NN73 597 aa7.23□□□□□ -1.25
LSM3P2-201ENST00000551246 SULF1Q8IWU6 871 aa7.23□□□□□ -1.25
LSM3P2-201ENST00000551246 KCTD12Q96CX2 325 aaKnown RBP7.23□□□□□ -1.25
LSM3P2-201ENST00000551246 RRBP1Q9P2E9 1410 aaKnown RBP7.23□□□□□ -1.25
LSM3P2-201ENST00000551246 BEGAINQ9BUH8 593 aa7.22□□□□□ -1.25
LSM3P2-201ENST00000551246 TIMELESSQ9UNS1 1208 aa7.22□□□□□ -1.25
LSM3P2-201ENST00000551246 CCDC88BA6NC98 1476 aa7.22□□□□□ -1.25
LSM3P2-201ENST00000551246 HDGFP51858 240 aaKnown RBP7.21□□□□□ -1.26
LSM3P2-201ENST00000551246 HPS5Q9UPZ3 1129 aa7.21□□□□□ -1.26
LSM3P2-201ENST00000551246 CEP164Q9UPV0 1460 aa7.21□□□□□ -1.26
LSM3P2-201ENST00000551246 RNF123Q5XPI4 1314 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms