RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 ITGAEP38570 1179 aa13.95□□□□□ -0.18
LETMD1-228ENST00000550929 UBR1Q8IWV7 1749 aa13.94□□□□□ -0.18
LETMD1-228ENST00000550929 ADGRL2O95490 1459 aa13.93□□□□□ -0.18
LETMD1-228ENST00000550929 ANKRD50Q9ULJ7 1429 aa13.92□□□□□ -0.18
LETMD1-228ENST00000550929 PIK3C2BO00750 1634 aa13.92□□□□□ -0.18
LETMD1-228ENST00000550929 ARHGAP23Q9P227 1491 aa13.91□□□□□ -0.18
LETMD1-228ENST00000550929 TMEM2Q9UHN6 1383 aa13.91□□□□□ -0.18
LETMD1-228ENST00000550929 SLC26A8Q96RN1 970 aa13.91□□□□□ -0.18
LETMD1-228ENST00000550929 SLIT1O75093 1534 aa13.91□□□□□ -0.18
LETMD1-228ENST00000550929 LMTK2Q8IWU2 1503 aa13.91□□□□□ -0.18
LETMD1-228ENST00000550929 LRRC7Q96NW7 1537 aa13.91□□□□□ -0.18
LETMD1-228ENST00000550929 STRCP1A6NGW2 1772 aa13.9□□□□□ -0.18
LETMD1-228ENST00000550929 BCANQ96GW7 911 aa13.9□□□□□ -0.18
LETMD1-228ENST00000550929 NOS1P29475 1434 aa13.89□□□□□ -0.19
LETMD1-228ENST00000550929 SYNMO15061 1565 aa13.89□□□□□ -0.19
LETMD1-228ENST00000550929 CHGAP10645 457 aaKnown RBP13.88□□□□□ -0.19
LETMD1-228ENST00000550929 RBM33Q96EV2 1170 aaKnown RBP13.88□□□□□ -0.19
LETMD1-228ENST00000550929 POLA2Q14181 598 aa13.87□□□□□ -0.19
LETMD1-228ENST00000550929 EFCAB6Q5THR3 1501 aa13.87□□□□□ -0.19
LETMD1-228ENST00000550929 ALKQ9UM73 1620 aa13.87□□□□□ -0.19
LETMD1-228ENST00000550929 SLC52A1Q9NWF4 448 aa13.86□□□□□ -0.19
LETMD1-228ENST00000550929 SOCS7O14512 581 aa13.85□□□□□ -0.19
LETMD1-228ENST00000550929 ZBTB22O15209 634 aa13.85□□□□□ -0.19
LETMD1-228ENST00000550929 NUTM2DQ5VT03 806 aaPredicted RBP13.84□□□□□ -0.19
LETMD1-228ENST00000550929 KCNA6P17658 529 aa13.83□□□□□ -0.19
LETMD1-228ENST00000550929 PROSER2Q86WR7 435 aaPredicted RBP13.83□□□□□ -0.19
LETMD1-228ENST00000550929 ATF5Q9Y2D1 282 aaPredicted RBP13.83□□□□□ -0.19
LETMD1-228ENST00000550929 PPP1R15AO75807 674 aaPredicted RBP13.83□□□□□ -0.2
LETMD1-228ENST00000550929 ADGRB3O60242 1522 aa13.82□□□□□ -0.2
LETMD1-228ENST00000550929 NUP155O75694 1391 aa13.82□□□□□ -0.2
LETMD1-228ENST00000550929 TMEM94Q12767 1356 aa13.82□□□□□ -0.2
LETMD1-228ENST00000550929 ROCK1Q13464 1354 aa13.82□□□□□ -0.2
LETMD1-228ENST00000550929 RPRD2Q5VT52 1461 aaKnown RBP13.8□□□□□ -0.2
LETMD1-228ENST00000550929 RIMS2Q9UQ26 1411 aa13.8□□□□□ -0.2
LETMD1-228ENST00000550929 TET3O43151 1660 aa13.79□□□□□ -0.2
LETMD1-228ENST00000550929 UNC13BO14795 1591 aa13.78□□□□□ -0.2
LETMD1-228ENST00000550929 MED1Q15648 1581 aaPredicted RBP13.78□□□□□ -0.2
LETMD1-228ENST00000550929 HDGFP51858 240 aaKnown RBP13.78□□□□□ -0.2
LETMD1-228ENST00000550929 ZFYVE9O95405 1425 aa13.77□□□□□ -0.2
LETMD1-228ENST00000550929 KDM5AP29375 1690 aaKnown RBP13.77□□□□□ -0.2
LETMD1-228ENST00000550929 PLEKHG1Q9ULL1 1385 aa13.76□□□□□ -0.21
LETMD1-228ENST00000550929 XIRP1Q702N8 1843 aaKnown RBP13.75□□□□□ -0.21
LETMD1-228ENST00000550929 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.75□□□□□ -0.21
LETMD1-228ENST00000550929 RBM42Q9BTD8 480 aaKnown RBP13.75□□□□□ -0.21
LETMD1-228ENST00000550929 TMEM131LA2VDJ0 1609 aa13.75□□□□□ -0.21
LETMD1-228ENST00000550929 E9PCH4 1651 aa13.75□□□□□ -0.21
LETMD1-228ENST00000550929 GCC2Q8IWJ2 1684 aa13.75□□□□□ -0.21
LETMD1-228ENST00000550929 POTEHQ6S545 545 aa13.74□□□□□ -0.21
LETMD1-228ENST00000550929 MYO5BQ9ULV0 1848 aa13.74□□□□□ -0.21
LETMD1-228ENST00000550929 TBX22Q9Y458 520 aa13.73□□□□□ -0.21
LETMD1-228ENST00000550929 IQGAP3Q86VI3 1631 aa13.73□□□□□ -0.21
LETMD1-228ENST00000550929 MSH6P52701 1360 aa13.71□□□□□ -0.21
LETMD1-228ENST00000550929 FAM135BQ49AJ0 1406 aa13.71□□□□□ -0.21
LETMD1-228ENST00000550929 ZNF326Q5BKZ1 582 aaKnown RBP13.71□□□□□ -0.21
LETMD1-228ENST00000550929 C14orf37Q86TY3 774 aa13.71□□□□□ -0.21
LETMD1-228ENST00000550929 SLAIN2Q9P270 581 aa13.71□□□□□ -0.22
LETMD1-228ENST00000550929 NKTRP30414 1462 aaKnown RBP13.7□□□□□ -0.22
LETMD1-228ENST00000550929 ADAMTS13Q76LX8 1427 aa13.7□□□□□ -0.22
LETMD1-228ENST00000550929 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
LETMD1-228ENST00000550929 NWD1Q149M9 1564 aa13.69□□□□□ -0.22
LETMD1-228ENST00000550929 RRBP1Q9P2E9 1410 aaKnown RBP13.69□□□□□ -0.22
LETMD1-228ENST00000550929 AMOTL2Q9Y2J4 779 aa13.69□□□□□ -0.22
LETMD1-228ENST00000550929 NAIPQ13075 1403 aa13.67□□□□□ -0.22
LETMD1-228ENST00000550929 RGS17Q9UGC6 210 aaPredicted RBP13.66□□□□□ -0.22
LETMD1-228ENST00000550929 ROBO1Q9Y6N7 1651 aa13.66□□□□□ -0.22
LETMD1-228ENST00000550929 PTPRUQ92729 1446 aa13.66□□□□□ -0.22
LETMD1-228ENST00000550929 CHD2O14647 1828 aaKnown RBP13.65□□□□□ -0.22
LETMD1-228ENST00000550929 ATF3P18847 181 aa13.63□□□□□ -0.23
LETMD1-228ENST00000550929 C19orf44Q9H6X5 657 aa13.63□□□□□ -0.23
LETMD1-228ENST00000550929 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
LETMD1-228ENST00000550929 PIK3R4Q99570 1358 aa13.62□□□□□ -0.23
LETMD1-228ENST00000550929 SPHKAPQ2M3C7 1700 aa13.62□□□□□ -0.23
LETMD1-228ENST00000550929 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
LETMD1-228ENST00000550929 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
LETMD1-228ENST00000550929 METP08581 1390 aa13.61□□□□□ -0.23
LETMD1-228ENST00000550929 TRPM2O94759 1503 aa13.61□□□□□ -0.23
LETMD1-228ENST00000550929 POTEAQ6S8J7 498 aa13.6□□□□□ -0.23
LETMD1-228ENST00000550929 DIP2AQ14689 1571 aa13.6□□□□□ -0.23
LETMD1-228ENST00000550929 NCOA3Q9Y6Q9 1424 aa13.6□□□□□ -0.23
LETMD1-228ENST00000550929 CLTCL1P53675 1640 aa13.6□□□□□ -0.23
LETMD1-228ENST00000550929 HFM1A2PYH4 1435 aa13.58□□□□□ -0.24
LETMD1-228ENST00000550929 PHLPP1O60346 1717 aa13.58□□□□□ -0.24
LETMD1-228ENST00000550929 JCADQ9P266 1359 aa13.58□□□□□ -0.24
LETMD1-228ENST00000550929 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.57□□□□□ -0.24
LETMD1-228ENST00000550929 NRXN3Q9Y4C0 1643 aa13.57□□□□□ -0.24
LETMD1-228ENST00000550929 BRINP3Q76B58 766 aa13.57□□□□□ -0.24
LETMD1-228ENST00000550929 NEXMIFQ5QGS0 1516 aa13.56□□□□□ -0.24
LETMD1-228ENST00000550929 SETBP1Q9Y6X0 1596 aa13.56□□□□□ -0.24
LETMD1-228ENST00000550929 VGFO15240 615 aaPredicted RBP13.55□□□□□ -0.24
LETMD1-228ENST00000550929 DDX17Q92841 729 aaKnown RBP13.55□□□□□ -0.24
LETMD1-228ENST00000550929 NUTM2BA6NNL0 878 aaPredicted RBP13.54□□□□□ -0.24
LETMD1-228ENST00000550929 NUTM2EB1AL46 878 aaPredicted RBP13.54□□□□□ -0.24
LETMD1-228ENST00000550929 RGL3Q3MIN7 710 aa13.54□□□□□ -0.24
LETMD1-228ENST00000550929 MEX3CQ5U5Q3 659 aaKnown RBP13.54□□□□□ -0.24
LETMD1-228ENST00000550929 NUTM2AQ8IVF1 878 aaPredicted RBP13.54□□□□□ -0.24
LETMD1-228ENST00000550929 COL16A1Q07092 1604 aaPredicted RBP13.53□□□□□ -0.24
LETMD1-228ENST00000550929 XRN1Q8IZH2 1706 aaKnown RBP13.52□□□□□ -0.24
LETMD1-228ENST00000550929 MPHOSPH9Q99550 1183 aa13.52□□□□□ -0.25
LETMD1-228ENST00000550929 KIF1BO60333 1816 aa13.51□□□□□ -0.25
LETMD1-228ENST00000550929 MST1RQ04912 1400 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms