RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 DDX19BQ9UMR2 479 aa12.77□□□□□ -0.37
SMARCC2-209ENST00000550164 C14orf37Q86TY3 774 aa12.76□□□□□ -0.37
SMARCC2-209ENST00000550164 GRIN2BQ13224 1484 aa12.76□□□□□ -0.37
SMARCC2-209ENST00000550164 ERBINQ96RT1 1412 aa12.76□□□□□ -0.37
SMARCC2-209ENST00000550164 SLFN5Q08AF3 891 aa12.76□□□□□ -0.37
SMARCC2-209ENST00000550164 MTHFSP49914 203 aa12.75□□□□□ -0.37
SMARCC2-209ENST00000550164 TRAK2O60296 914 aa12.75□□□□□ -0.37
SMARCC2-209ENST00000550164 NOL8Q76FK4 1167 aaKnown RBP12.75□□□□□ -0.37
SMARCC2-209ENST00000550164 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMARCC2-209ENST00000550164 TERF2IPQ9NYB0 399 aa12.75□□□□□ -0.37
SMARCC2-209ENST00000550164 FAM43AQ8N2R8 423 aa12.74□□□□□ -0.37
SMARCC2-209ENST00000550164 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
SMARCC2-209ENST00000550164 MCCP23508 829 aa12.73□□□□□ -0.37
SMARCC2-209ENST00000550164 DUSP27Q5VZP5 1158 aa12.73□□□□□ -0.37
SMARCC2-209ENST00000550164 CUL7Q14999 1698 aa12.73□□□□□ -0.37
SMARCC2-209ENST00000550164 RIPK4P57078 832 aa12.73□□□□□ -0.37
SMARCC2-209ENST00000550164 SKOR2Q2VWA4 1001 aaPredicted RBP12.72□□□□□ -0.37
SMARCC2-209ENST00000550164 DHX29Q7Z478 1369 aaKnown RBP12.71□□□□□ -0.37
SMARCC2-209ENST00000550164 TMEM132EQ6IEE7 984 aa12.71□□□□□ -0.37
SMARCC2-209ENST00000550164 MRE11P49959 708 aa12.71□□□□□ -0.37
SMARCC2-209ENST00000550164 CAMSAP2Q08AD1 1489 aa12.71□□□□□ -0.38
SMARCC2-209ENST00000550164 OS9Q13438 667 aaPredicted RBP12.71□□□□□ -0.38
SMARCC2-209ENST00000550164 AFAP1Q8N556 730 aa12.71□□□□□ -0.38
SMARCC2-209ENST00000550164 TSR2Q969E8 191 aaKnown RBP12.71□□□□□ -0.38
SMARCC2-209ENST00000550164 SLC12A5Q9H2X9 1139 aa12.71□□□□□ -0.38
SMARCC2-209ENST00000550164 FOXD4L6Q3SYB3 417 aaPredicted RBP12.7□□□□□ -0.38
SMARCC2-209ENST00000550164 SLC4A10Q6U841 1118 aa12.7□□□□□ -0.38
SMARCC2-209ENST00000550164 FOXD4L3Q6VB84 417 aaPredicted RBP12.7□□□□□ -0.38
SMARCC2-209ENST00000550164 KCNJ4P48050 445 aa12.7□□□□□ -0.38
SMARCC2-209ENST00000550164 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
SMARCC2-209ENST00000550164 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
SMARCC2-209ENST00000550164 EVC2Q86UK5 1308 aa12.7□□□□□ -0.38
SMARCC2-209ENST00000550164 UGGT2Q9NYU1 1516 aa12.7□□□□□ -0.38
SMARCC2-209ENST00000550164 CC2D2AQ9P2K1 1620 aa12.7□□□□□ -0.38
SMARCC2-209ENST00000550164 AAMPQ13685 434 aa12.69□□□□□ -0.38
SMARCC2-209ENST00000550164 GGNBP2Q9H3C7 697 aa12.69□□□□□ -0.38
SMARCC2-209ENST00000550164 IQGAP2Q13576 1575 aa12.69□□□□□ -0.38
SMARCC2-209ENST00000550164 ST18O60284 1047 aa12.69□□□□□ -0.38
SMARCC2-209ENST00000550164 EXOSC9Q06265 439 aaKnown RBP12.69□□□□□ -0.38
SMARCC2-209ENST00000550164 THOC2Q8NI27 1593 aaKnown RBP12.68□□□□□ -0.38
SMARCC2-209ENST00000550164 MINK1Q8N4C8 1332 aaPredicted RBP12.68□□□□□ -0.38
SMARCC2-209ENST00000550164 TRIM6-TRIM34B2RNG4 842 aa12.68□□□□□ -0.38
SMARCC2-209ENST00000550164 WWC1Q8IX03 1113 aa12.68□□□□□ -0.38
SMARCC2-209ENST00000550164 SNAPC4Q5SXM2 1469 aa12.68□□□□□ -0.38
SMARCC2-209ENST00000550164 MCM4P33991 863 aa12.68□□□□□ -0.38
SMARCC2-209ENST00000550164 KIAA2012Q0VF49 1180 aa12.68□□□□□ -0.38
SMARCC2-209ENST00000550164 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
SMARCC2-209ENST00000550164 MLECQ14165 292 aa12.67□□□□□ -0.38
SMARCC2-209ENST00000550164 RTF1Q92541 710 aaKnown RBP12.67□□□□□ -0.38
SMARCC2-209ENST00000550164 DISP3Q9P2K9 1392 aa12.67□□□□□ -0.38
SMARCC2-209ENST00000550164 DIAPH1O60610 1272 aaKnown RBP12.67□□□□□ -0.38
SMARCC2-209ENST00000550164 GOLGA6L4A6NEF3 574 aa12.66□□□□□ -0.38
SMARCC2-209ENST00000550164 IGHDP01880 384 aa12.66□□□□□ -0.38
SMARCC2-209ENST00000550164 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
SMARCC2-209ENST00000550164 PLB1Q6P1J6 1458 aa12.66□□□□□ -0.38
SMARCC2-209ENST00000550164 RNF123Q5XPI4 1314 aa12.66□□□□□ -0.38
SMARCC2-209ENST00000550164 CHAF1AQ13111 956 aaPredicted RBP12.66□□□□□ -0.38
SMARCC2-209ENST00000550164 KIF16BQ96L93 1317 aa12.66□□□□□ -0.38
SMARCC2-209ENST00000550164 CABP2Q9NPB3 220 aa12.65□□□□□ -0.38
SMARCC2-209ENST00000550164 ARHGAP5Q13017 1502 aa12.65□□□□□ -0.38
SMARCC2-209ENST00000550164 SYAP1Q96A49 352 aaPredicted RBP12.65□□□□□ -0.38
SMARCC2-209ENST00000550164 ARHGEF11O15085 1522 aa12.65□□□□□ -0.38
SMARCC2-209ENST00000550164 HMMRO75330 724 aa12.64□□□□□ -0.39
SMARCC2-209ENST00000550164 MCTP1Q6DN14 999 aa12.64□□□□□ -0.39
SMARCC2-209ENST00000550164 MVPQ14764 893 aaKnown RBP12.64□□□□□ -0.39
SMARCC2-209ENST00000550164 C8orf34Q49A92 452 aa12.64□□□□□ -0.39
SMARCC2-209ENST00000550164 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
SMARCC2-209ENST00000550164 HMOX1P09601 288 aa12.64□□□□□ -0.39
SMARCC2-209ENST00000550164 C1orf115Q9H7X2 142 aa12.64□□□□□ -0.39
SMARCC2-209ENST00000550164 KIAA0586Q9BVV6 1533 aa12.63□□□□□ -0.39
SMARCC2-209ENST00000550164 KIAA1211Q6ZU35 1233 aa12.63□□□□□ -0.39
SMARCC2-209ENST00000550164 TBC1D2Q9BYX2 928 aa12.63□□□□□ -0.39
SMARCC2-209ENST00000550164 FAM13BQ9NYF5 915 aa12.63□□□□□ -0.39
SMARCC2-209ENST00000550164 NASPP49321 788 aaPredicted RBP12.63□□□□□ -0.39
SMARCC2-209ENST00000550164 DRC7Q8IY82 874 aa12.63□□□□□ -0.39
SMARCC2-209ENST00000550164 NOB1Q9ULX3 412 aaKnown RBP12.63□□□□□ -0.39
SMARCC2-209ENST00000550164 LRPPRCP42704 1394 aaKnown RBP12.63□□□□□ -0.39
SMARCC2-209ENST00000550164 ZRSR1Q15695 479 aaKnown RBP12.63□□□□□ -0.39
SMARCC2-209ENST00000550164 URB2Q14146 1524 aaKnown RBP12.62□□□□□ -0.39
SMARCC2-209ENST00000550164 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
SMARCC2-209ENST00000550164 FGD1P98174 961 aa12.62□□□□□ -0.39
SMARCC2-209ENST00000550164 LMOD3Q0VAK6 560 aa12.62□□□□□ -0.39
SMARCC2-209ENST00000550164 TAOK2Q9UL54 1235 aa12.62□□□□□ -0.39
SMARCC2-209ENST00000550164 PARD3Q8TEW0 1356 aa12.62□□□□□ -0.39
SMARCC2-209ENST00000550164 SYNJ2O15056 1496 aa12.62□□□□□ -0.39
SMARCC2-209ENST00000550164 NKTRP30414 1462 aaKnown RBP12.62□□□□□ -0.39
SMARCC2-209ENST00000550164 GRPEL1Q9HAV7 217 aa12.62□□□□□ -0.39
SMARCC2-209ENST00000550164 PLEKHH2Q8IVE3 1493 aa12.62□□□□□ -0.39
SMARCC2-209ENST00000550164 RILPL2Q969X0 211 aa12.61□□□□□ -0.39
SMARCC2-209ENST00000550164 STK31Q9BXU1 1019 aa12.61□□□□□ -0.39
SMARCC2-209ENST00000550164 WDR63Q8IWG1 891 aa12.61□□□□□ -0.39
SMARCC2-209ENST00000550164 RALGAPBQ86X10 1494 aa12.61□□□□□ -0.39
SMARCC2-209ENST00000550164 NUTM2FA1L443 756 aa12.61□□□□□ -0.39
SMARCC2-209ENST00000550164 ATF7IPQ6VMQ6 1270 aa12.6□□□□□ -0.39
SMARCC2-209ENST00000550164 TCOF1Q13428 1488 aaKnown RBP12.6□□□□□ -0.39
SMARCC2-209ENST00000550164 NINLQ9Y2I6 1382 aa12.6□□□□□ -0.39
SMARCC2-209ENST00000550164 NAP1L2Q9ULW6 460 aaPredicted RBP12.6□□□□□ -0.39
SMARCC2-209ENST00000550164 CAVIN1Q6NZI2 390 aaKnown RBP12.6□□□□□ -0.39
SMARCC2-209ENST00000550164 PER1O15534 1290 aaPredicted RBP12.59□□□□□ -0.39
SMARCC2-209ENST00000550164 NUCB2P80303 420 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms