RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 THOC2Q8NI27 1593 aaKnown RBP10.85□□□□□ -0.67
COX6A1-202ENST00000549525 SMAPO00193 183 aa10.84□□□□□ -0.67
COX6A1-202ENST00000549525 MMRN1Q13201 1228 aa10.84□□□□□ -0.67
COX6A1-202ENST00000549525 FAM161AQ3B820 660 aa10.84□□□□□ -0.67
COX6A1-202ENST00000549525 ZC3H15Q8WU90 426 aaKnown RBP10.84□□□□□ -0.67
COX6A1-202ENST00000549525 TATDN2Q93075 761 aa10.83□□□□□ -0.68
COX6A1-202ENST00000549525 NBPF3Q9H094 633 aa10.83□□□□□ -0.68
COX6A1-202ENST00000549525 MYT1LQ9UL68 1186 aa10.83□□□□□ -0.68
COX6A1-202ENST00000549525 TOP2BQ02880 1626 aa10.83□□□□□ -0.68
COX6A1-202ENST00000549525 CUX1P39880 1505 aa10.83□□□□□ -0.68
COX6A1-202ENST00000549525 NUDT18Q6ZVK8 323 aa10.82□□□□□ -0.68
COX6A1-202ENST00000549525 MRPL50Q8N5N7 158 aaKnown RBP10.82□□□□□ -0.68
COX6A1-202ENST00000549525 ADGRG1Q9Y653 693 aa10.82□□□□□ -0.68
COX6A1-202ENST00000549525 NBPF26B4DH59 902 aa10.81□□□□□ -0.68
COX6A1-202ENST00000549525 PNMA3Q9UL41 463 aa10.81□□□□□ -0.68
COX6A1-202ENST00000549525 SOGA1O94964 1423 aa10.81□□□□□ -0.68
COX6A1-202ENST00000549525 LAPTM4BQ86VI4 370 aa10.8□□□□□ -0.68
COX6A1-202ENST00000549525 EYA1Q99502 592 aa10.8□□□□□ -0.68
COX6A1-202ENST00000549525 IFT140Q96RY7 1462 aa10.8□□□□□ -0.68
COX6A1-202ENST00000549525 ZMYND10O75800 440 aa10.79□□□□□ -0.68
COX6A1-202ENST00000549525 STAC3Q96MF2 364 aa10.79□□□□□ -0.68
COX6A1-202ENST00000549525 BIVM-ERCC5R4GMW8 1640 aa10.79□□□□□ -0.68
COX6A1-202ENST00000549525 FGD5Q6ZNL6 1462 aa10.79□□□□□ -0.68
COX6A1-202ENST00000549525 FAM98CQ17RN3 349 aaKnown RBP10.78□□□□□ -0.68
COX6A1-202ENST00000549525 POLA1P09884 1462 aaPredicted RBP10.78□□□□□ -0.68
COX6A1-202ENST00000549525 RNF166Q96A37 237 aaPredicted RBP10.77□□□□□ -0.69
COX6A1-202ENST00000549525 SYNJ1O43426 1573 aa10.77□□□□□ -0.69
COX6A1-202ENST00000549525 MAP2K5Q13163 448 aa10.76□□□□□ -0.69
COX6A1-202ENST00000549525 ZFRQ96KR1 1074 aaKnown RBP10.76□□□□□ -0.69
COX6A1-202ENST00000549525 BARGINQ6ZT62 677 aa10.75□□□□□ -0.69
COX6A1-202ENST00000549525 METTL3Q86U44 580 aaKnown RBP10.74□□□□□ -0.69
COX6A1-202ENST00000549525 PXYLP1Q8TE99 480 aa10.74□□□□□ -0.69
COX6A1-202ENST00000549525 KCTD12Q96CX2 325 aaKnown RBP10.74□□□□□ -0.69
COX6A1-202ENST00000549525 PHOX2BQ99453 314 aa10.74□□□□□ -0.69
COX6A1-202ENST00000549525 WDR97A6NE52 1622 aa10.73□□□□□ -0.69
COX6A1-202ENST00000549525 IRF6O14896 467 aa10.73□□□□□ -0.69
COX6A1-202ENST00000549525 RBM46Q8TBY0 533 aaKnown RBP10.73□□□□□ -0.69
COX6A1-202ENST00000549525 WNT2BQ93097 391 aa10.73□□□□□ -0.69
COX6A1-202ENST00000549525 ABCA10Q8WWZ4 1543 aa10.73□□□□□ -0.69
COX6A1-202ENST00000549525 GOLGA8CPA6NN73 597 aa10.72□□□□□ -0.69
COX6A1-202ENST00000549525 KIF27Q86VH2 1401 aa10.72□□□□□ -0.69
COX6A1-202ENST00000549525 OATP04181 439 aa10.71□□□□□ -0.69
COX6A1-202ENST00000549525 MINK1Q8N4C8 1332 aaPredicted RBP10.71□□□□□ -0.69
COX6A1-202ENST00000549525 CCDC102AQ96A19 550 aa10.71□□□□□ -0.69
COX6A1-202ENST00000549525 RAD54L2Q9Y4B4 1467 aa10.71□□□□□ -0.69
COX6A1-202ENST00000549525 RCCD1A6NED2 376 aa10.7□□□□□ -0.7
COX6A1-202ENST00000549525 BCAMP50895 628 aa10.7□□□□□ -0.7
COX6A1-202ENST00000549525 THSD4Q6ZMP0 1018 aa10.7□□□□□ -0.7
COX6A1-202ENST00000549525 SAMD7Q7Z3H4 446 aa10.7□□□□□ -0.7
COX6A1-202ENST00000549525 ANKK1Q8NFD2 765 aa10.7□□□□□ -0.7
COX6A1-202ENST00000549525 TARBP1Q13395 1621 aaKnown RBP10.69□□□□□ -0.7
COX6A1-202ENST00000549525 EEA1Q15075 1411 aa10.69□□□□□ -0.7
COX6A1-202ENST00000549525 NLRP7Q8WX94 980 aa10.69□□□□□ -0.7
COX6A1-202ENST00000549525 TDRD9Q8NDG6 1382 aaKnown RBP10.68□□□□□ -0.7
COX6A1-202ENST00000549525 SOWAHBA6NEL2 793 aa10.68□□□□□ -0.7
COX6A1-202ENST00000549525 GAPVD1Q14C86 1478 aa10.68□□□□□ -0.7
COX6A1-202ENST00000549525 DNAJB2P25686 324 aa10.67□□□□□ -0.7
COX6A1-202ENST00000549525 SWT1Q5T5J6 900 aaKnown RBP10.67□□□□□ -0.7
COX6A1-202ENST00000549525 TMEM134Q9H6X4 195 aa10.67□□□□□ -0.7
COX6A1-202ENST00000549525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.66□□□□□ -0.7
COX6A1-202ENST00000549525 KRI1Q8N9T8 703 aaKnown RBP10.66□□□□□ -0.7
COX6A1-202ENST00000549525 LRCH3Q96II8 777 aa10.66□□□□□ -0.7
COX6A1-202ENST00000549525 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.66□□□□□ -0.7
COX6A1-202ENST00000549525 GRIN2BQ13224 1484 aa10.66□□□□□ -0.7
COX6A1-202ENST00000549525 AQRO60306 1485 aaKnown RBP eCLIP10.64□□□□□ -0.712e-7■■■■■ 34.5
COX6A1-202ENST00000549525 PTPN5P54829 565 aa10.63□□□□□ -0.71
COX6A1-202ENST00000549525 SLC24A3Q9HC58 644 aa10.63□□□□□ -0.71
COX6A1-202ENST00000549525 ERICH3Q5RHP9 1530 aa10.63□□□□□ -0.71
COX6A1-202ENST00000549525 ZNF608Q9ULD9 1512 aaPredicted RBP10.63□□□□□ -0.71
COX6A1-202ENST00000549525 HPS5Q9UPZ3 1129 aa10.62□□□□□ -0.71
COX6A1-202ENST00000549525 CHMP7Q8WUX9 453 aaPredicted RBP10.61□□□□□ -0.71
COX6A1-202ENST00000549525 WBP1LQ9NX94 342 aa10.61□□□□□ -0.71
COX6A1-202ENST00000549525 MAGI1Q96QZ7 1491 aaPredicted RBP10.61□□□□□ -0.71
COX6A1-202ENST00000549525 EIF4G3O43432 1585 aaKnown RBP10.6□□□□□ -0.71
COX6A1-202ENST00000549525 HCSTQ9UBK5 93 aa10.6□□□□□ -0.71
COX6A1-202ENST00000549525 TSR3Q9UJK0 312 aaKnown RBP10.6□□□□□ -0.71
COX6A1-202ENST00000549525 IGF1RP08069 1367 aa10.6□□□□□ -0.71
COX6A1-202ENST00000549525 ABCA5Q8WWZ7 1642 aa10.59□□□□□ -0.71
COX6A1-202ENST00000549525 RNF40O75150 1001 aa10.59□□□□□ -0.71
COX6A1-202ENST00000549525 HDGFP51858 240 aaKnown RBP10.59□□□□□ -0.71
COX6A1-202ENST00000549525 TPRNQ4KMQ1 711 aa10.59□□□□□ -0.71
COX6A1-202ENST00000549525 AK7Q96M32 723 aa10.59□□□□□ -0.71
COX6A1-202ENST00000549525 TRIM66O15016 1216 aa10.58□□□□□ -0.72
COX6A1-202ENST00000549525 MDM2Q00987 491 aaPredicted RBP10.58□□□□□ -0.72
COX6A1-202ENST00000549525 SLF2Q8IX21 1173 aa10.58□□□□□ -0.72
COX6A1-202ENST00000549525 FHAD1B1AJZ9 1412 aa10.58□□□□□ -0.72
COX6A1-202ENST00000549525 CARMIL1Q5VZK9 1371 aa10.57□□□□□ -0.72
COX6A1-202ENST00000549525 TMUB1Q9BVT8 246 aa10.57□□□□□ -0.72
COX6A1-202ENST00000549525 DAXXQ9UER7 740 aaPredicted RBP10.57□□□□□ -0.72
COX6A1-202ENST00000549525 SLC10A3P09131 477 aa10.56□□□□□ -0.72
COX6A1-202ENST00000549525 AMHR2Q16671 573 aa10.56□□□□□ -0.72
COX6A1-202ENST00000549525 FAM9AQ8IZU1 332 aaPredicted RBP10.56□□□□□ -0.72
COX6A1-202ENST00000549525 REPIN1Q9BWE0 567 aaKnown RBP10.56□□□□□ -0.72
COX6A1-202ENST00000549525 CUL7Q14999 1698 aa10.55□□□□□ -0.72
COX6A1-202ENST00000549525 PPP4CP60510 307 aa10.55□□□□□ -0.72
COX6A1-202ENST00000549525 SYNJ2O15056 1496 aa10.55□□□□□ -0.72
COX6A1-202ENST00000549525 SNAPC4Q5SXM2 1469 aa10.55□□□□□ -0.72
COX6A1-202ENST00000549525 PBRM1Q86U86 1689 aa10.54□□□□□ -0.72
COX6A1-202ENST00000549525 DDX11L8A8MPP1 907 aa10.52□□□□□ -0.73
COX6A1-202ENST00000549525 PRKCSHP14314 528 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms