RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RNF123Q5XPI4 1314 aa17.84■□□□□ 0.45
PRPF40B-209ENST00000548825 PLEKHH1Q9ULM0 1364 aa17.84■□□□□ 0.45
PRPF40B-209ENST00000548825 CFAP65Q6ZU64 1925 aaKnown RBP17.84■□□□□ 0.45
PRPF40B-209ENST00000548825 U2SURPO15042 1029 aaKnown RBP17.84■□□□□ 0.45
PRPF40B-209ENST00000548825 MLECQ14165 292 aa17.84■□□□□ 0.45
PRPF40B-209ENST00000548825 CHD1O14646 1710 aa17.84■□□□□ 0.45
PRPF40B-209ENST00000548825 STAG3Q9UJ98 1225 aa17.83■□□□□ 0.44
PRPF40B-209ENST00000548825 TCERG1O14776 1098 aaKnown RBP17.82■□□□□ 0.44
PRPF40B-209ENST00000548825 NEFMP07197 916 aa17.82■□□□□ 0.44
PRPF40B-209ENST00000548825 CARD14Q9BXL6 1004 aa17.82■□□□□ 0.44
PRPF40B-209ENST00000548825 COG6Q9Y2V7 657 aa17.82■□□□□ 0.44
PRPF40B-209ENST00000548825 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.81■□□□□ 0.44
PRPF40B-209ENST00000548825 PANK1Q8TE04 598 aa17.81■□□□□ 0.44
PRPF40B-209ENST00000548825 CABP2Q9NPB3 220 aa17.81■□□□□ 0.44
PRPF40B-209ENST00000548825 COL17A1Q9UMD9 1497 aaPredicted RBP17.81■□□□□ 0.44
PRPF40B-209ENST00000548825 SRPK2P78362 688 aaKnown RBP17.81■□□□□ 0.44
PRPF40B-209ENST00000548825 DUSP27Q5VZP5 1158 aa17.81■□□□□ 0.44
PRPF40B-209ENST00000548825 MAGI2Q86UL8 1455 aa17.8■□□□□ 0.44
PRPF40B-209ENST00000548825 UGGT1Q9NYU2 1555 aa17.79■□□□□ 0.44
PRPF40B-209ENST00000548825 U2AF1L5P0DN76 240 aaPredicted RBP17.79■□□□□ 0.44
PRPF40B-209ENST00000548825 U2AF1Q01081 240 aaKnown RBP eCLIP17.79■□□□□ 0.44
PRPF40B-209ENST00000548825 ABCC2Q92887 1545 aa17.79■□□□□ 0.44
PRPF40B-209ENST00000548825 ARHGEF5Q12774 1597 aa17.79■□□□□ 0.44
PRPF40B-209ENST00000548825 PREX2Q70Z35 1606 aa17.78■□□□□ 0.44
PRPF40B-209ENST00000548825 FANCAO15360 1455 aa17.77■□□□□ 0.44
PRPF40B-209ENST00000548825 DUOX2Q9NRD8 1548 aa17.77■□□□□ 0.44
PRPF40B-209ENST00000548825 CENPJQ9HC77 1338 aaPredicted RBP17.77■□□□□ 0.44
PRPF40B-209ENST00000548825 RTN4Q9NQC3 1192 aaKnown RBP17.77■□□□□ 0.44
PRPF40B-209ENST00000548825 MTHFSP49914 203 aa17.76■□□□□ 0.43
PRPF40B-209ENST00000548825 BACH2Q9BYV9 841 aa17.76■□□□□ 0.43
PRPF40B-209ENST00000548825 EIF3AQ14152 1382 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-209ENST00000548825 GPRASP1Q5JY77 1395 aa17.75■□□□□ 0.43
PRPF40B-209ENST00000548825 MINK1Q8N4C8 1332 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-209ENST00000548825 ADGRL1O94910 1474 aa17.75■□□□□ 0.43
PRPF40B-209ENST00000548825 GGNBP2Q9H3C7 697 aa17.74■□□□□ 0.43
PRPF40B-209ENST00000548825 TNNQ9UQP3 1299 aa17.74■□□□□ 0.43
PRPF40B-209ENST00000548825 FBLN1P23142 703 aa17.73■□□□□ 0.43
PRPF40B-209ENST00000548825 POGKQ9P215 609 aa17.73■□□□□ 0.43
PRPF40B-209ENST00000548825 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
PRPF40B-209ENST00000548825 SLFN5Q08AF3 891 aa17.72■□□□□ 0.43
PRPF40B-209ENST00000548825 ARXQ96QS3 562 aa17.72■□□□□ 0.43
PRPF40B-209ENST00000548825 NOS1P29475 1434 aa17.71■□□□□ 0.43
PRPF40B-209ENST00000548825 TRPM1Q7Z4N2 1603 aa17.71■□□□□ 0.43
PRPF40B-209ENST00000548825 TCP11L2Q8N4U5 519 aa17.71■□□□□ 0.43
PRPF40B-209ENST00000548825 SCAF11Q99590 1463 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-209ENST00000548825 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.7■□□□□ 0.42
PRPF40B-209ENST00000548825 POLR1AO95602 1720 aaPredicted RBP17.7■□□□□ 0.42
PRPF40B-209ENST00000548825 ATP10AO60312 1499 aa17.7■□□□□ 0.42
PRPF40B-209ENST00000548825 MYO5CQ9NQX4 1742 aa17.69■□□□□ 0.42
PRPF40B-209ENST00000548825 SPRYD3Q8NCJ5 442 aa17.69■□□□□ 0.42
PRPF40B-209ENST00000548825 TSR2Q969E8 191 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-209ENST00000548825 WDR7Q9Y4E6 1490 aa17.68■□□□□ 0.42
PRPF40B-209ENST00000548825 MAST1Q9Y2H9 1570 aa17.68■□□□□ 0.42
PRPF40B-209ENST00000548825 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
PRPF40B-209ENST00000548825 NSD3Q9BZ95 1437 aa17.67■□□□□ 0.42
PRPF40B-209ENST00000548825 CFAP53Q96M91 514 aa17.67■□□□□ 0.42
PRPF40B-209ENST00000548825 NUTM2FA1L443 756 aa17.66■□□□□ 0.42
PRPF40B-209ENST00000548825 SOX12O15370 315 aa17.66■□□□□ 0.42
PRPF40B-209ENST00000548825 WWC1Q8IX03 1113 aa17.66■□□□□ 0.42
PRPF40B-209ENST00000548825 ASXL2Q76L83 1435 aa17.66■□□□□ 0.42
PRPF40B-209ENST00000548825 E9PSI1 815 aa17.66■□□□□ 0.42
PRPF40B-209ENST00000548825 IGHDP01880 384 aa17.65■□□□□ 0.42
PRPF40B-209ENST00000548825 CENPQQ7L2Z9 268 aaPredicted RBP17.65■□□□□ 0.42
PRPF40B-209ENST00000548825 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-209ENST00000548825 FBXO31Q5XUX0 539 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-209ENST00000548825 PRDM15P57071 1507 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-209ENST00000548825 FTSJ3Q8IY81 847 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-209ENST00000548825 ELL2O00472 640 aaPredicted RBP17.63■□□□□ 0.41
PRPF40B-209ENST00000548825 IDI1Q13907 227 aa17.62■□□□□ 0.41
PRPF40B-209ENST00000548825 SLKQ9H2G2 1235 aaPredicted RBP17.62■□□□□ 0.41
PRPF40B-209ENST00000548825 ABCC1P33527 1531 aa17.61■□□□□ 0.41
PRPF40B-209ENST00000548825 CGNL1Q0VF96 1302 aa17.61■□□□□ 0.41
PRPF40B-209ENST00000548825 BLMP54132 1417 aaPredicted RBP17.61■□□□□ 0.41
PRPF40B-209ENST00000548825 MS4A1P11836 297 aa17.6■□□□□ 0.41
PRPF40B-209ENST00000548825 PRAM1Q96QH2 718 aa17.6■□□□□ 0.41
PRPF40B-209ENST00000548825 FAM161AQ3B820 660 aa17.6■□□□□ 0.41
PRPF40B-209ENST00000548825 ASXL1Q8IXJ9 1541 aa17.59■□□□□ 0.41
PRPF40B-209ENST00000548825 PLEKHG5O94827 1062 aa17.59■□□□□ 0.41
PRPF40B-209ENST00000548825 CD109Q6YHK3 1445 aa17.59■□□□□ 0.41
PRPF40B-209ENST00000548825 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
PRPF40B-209ENST00000548825 IQGAP3Q86VI3 1631 aa17.59■□□□□ 0.41
PRPF40B-209ENST00000548825 RUNDC1Q96C34 613 aa17.59■□□□□ 0.41
PRPF40B-209ENST00000548825 UNC13BO14795 1591 aa17.59■□□□□ 0.41
PRPF40B-209ENST00000548825 VGFO15240 615 aaPredicted RBP17.58■□□□□ 0.4
PRPF40B-209ENST00000548825 EVC2Q86UK5 1308 aa17.57■□□□□ 0.4
PRPF40B-209ENST00000548825 RLBP1P12271 317 aa17.57■□□□□ 0.4
PRPF40B-209ENST00000548825 SMC4Q9NTJ3 1288 aa17.57■□□□□ 0.4
PRPF40B-209ENST00000548825 ATP7AQ04656 1500 aa17.57■□□□□ 0.4
PRPF40B-209ENST00000548825 HMOX1P09601 288 aa17.57■□□□□ 0.4
PRPF40B-209ENST00000548825 ITPRIPQ8IWB1 547 aa17.56■□□□□ 0.4
PRPF40B-209ENST00000548825 CLTCL1P53675 1640 aa17.56■□□□□ 0.4
PRPF40B-209ENST00000548825 DDRGK1Q96HY6 314 aa17.56■□□□□ 0.4
PRPF40B-209ENST00000548825 E9PCH4 1651 aa17.56■□□□□ 0.4
PRPF40B-209ENST00000548825 EIF2AK4Q9P2K8 1649 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-209ENST00000548825 C14orf93Q9H972 538 aaKnown RBP17.55■□□□□ 0.4
PRPF40B-209ENST00000548825 WAPLQ7Z5K2 1190 aa17.55■□□□□ 0.4
PRPF40B-209ENST00000548825 ZMYM4Q5VZL5 1548 aa17.54■□□□□ 0.4
PRPF40B-209ENST00000548825 ZFYVE16Q7Z3T8 1539 aa17.54■□□□□ 0.4
PRPF40B-209ENST00000548825 THUMPD2Q9BTF0 503 aaKnown RBP17.54■□□□□ 0.4
PRPF40B-209ENST00000548825 ZNF521Q96K83 1311 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms