RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 NCOA3Q9Y6Q9 1424 aa14.65□□□□□ -0.06
SSH1-205ENST00000546812 KDM5AP29375 1690 aaKnown RBP14.65□□□□□ -0.06
SSH1-205ENST00000546812 COL16A1Q07092 1604 aaPredicted RBP14.64□□□□□ -0.07
SSH1-205ENST00000546812 KANK4Q5T7N3 995 aaPredicted RBP14.64□□□□□ -0.07
SSH1-205ENST00000546812 CADPS2Q86UW7 1296 aa14.63□□□□□ -0.07
SSH1-205ENST00000546812 NOS1P29475 1434 aa14.63□□□□□ -0.07
SSH1-205ENST00000546812 PLEKHG1Q9ULL1 1385 aa14.62□□□□□ -0.07
SSH1-205ENST00000546812 LMTK2Q8IWU2 1503 aa14.62□□□□□ -0.07
SSH1-205ENST00000546812 ABCC5O15440 1437 aa14.62□□□□□ -0.07
SSH1-205ENST00000546812 HDGFP51858 240 aaKnown RBP14.62□□□□□ -0.07
SSH1-205ENST00000546812 C14orf37Q86TY3 774 aa14.62□□□□□ -0.07
SSH1-205ENST00000546812 C19orf44Q9H6X5 657 aa14.62□□□□□ -0.07
SSH1-205ENST00000546812 TBX22Q9Y458 520 aa14.62□□□□□ -0.07
SSH1-205ENST00000546812 ATF3P18847 181 aa14.61□□□□□ -0.07
SSH1-205ENST00000546812 CDK12Q9NYV4 1490 aaPredicted RBP14.61□□□□□ -0.07
SSH1-205ENST00000546812 PPP1R15AO75807 674 aaPredicted RBP14.6□□□□□ -0.07
SSH1-205ENST00000546812 ADGRB3O60242 1522 aa14.6□□□□□ -0.07
SSH1-205ENST00000546812 NUTM2BA6NNL0 878 aaPredicted RBP14.59□□□□□ -0.07
SSH1-205ENST00000546812 NUTM2EB1AL46 878 aaPredicted RBP14.59□□□□□ -0.07
SSH1-205ENST00000546812 NUTM2AQ8IVF1 878 aaPredicted RBP14.59□□□□□ -0.07
SSH1-205ENST00000546812 ZFYVE9O95405 1425 aa14.58□□□□□ -0.07
SSH1-205ENST00000546812 AFF2P51816 1311 aa14.58□□□□□ -0.08
SSH1-205ENST00000546812 AHDC1Q5TGY3 1603 aaPredicted RBP14.57□□□□□ -0.08
SSH1-205ENST00000546812 BRINP3Q76B58 766 aa14.57□□□□□ -0.08
SSH1-205ENST00000546812 VPS8Q8N3P4 1428 aa14.57□□□□□ -0.08
SSH1-205ENST00000546812 RIMS2Q9UQ26 1411 aa14.57□□□□□ -0.08
SSH1-205ENST00000546812 ANKRD30AQ9BXX3 1397 aa14.56□□□□□ -0.08
SSH1-205ENST00000546812 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.55□□□□□ -0.08
SSH1-205ENST00000546812 CHIC2Q9UKJ5 165 aa14.55□□□□□ -0.08
SSH1-205ENST00000546812 DAPK1P53355 1430 aa14.55□□□□□ -0.08
SSH1-205ENST00000546812 RBM6P78332 1123 aaKnown RBP14.54□□□□□ -0.08
SSH1-205ENST00000546812 QTRT2Q9H974 415 aaKnown RBP14.54□□□□□ -0.08
SSH1-205ENST00000546812 CHD2O14647 1828 aaKnown RBP14.53□□□□□ -0.08
SSH1-205ENST00000546812 SHPRHQ149N8 1683 aa14.53□□□□□ -0.08
SSH1-205ENST00000546812 PIK3R4Q99570 1358 aa14.53□□□□□ -0.08
SSH1-205ENST00000546812 ADAMTS13Q76LX8 1427 aa14.52□□□□□ -0.08
SSH1-205ENST00000546812 LRRC59Q96AG4 307 aaKnown RBP14.52□□□□□ -0.09
SSH1-205ENST00000546812 RPRD2Q5VT52 1461 aaKnown RBP14.51□□□□□ -0.09
SSH1-205ENST00000546812 RGS12O14924 1447 aa14.51□□□□□ -0.09
SSH1-205ENST00000546812 SETD5Q9C0A6 1442 aa14.51□□□□□ -0.09
SSH1-205ENST00000546812 NUTM2DQ5VT03 806 aaPredicted RBP14.51□□□□□ -0.09
SSH1-205ENST00000546812 C8orf37Q96NL8 207 aa14.51□□□□□ -0.09
SSH1-205ENST00000546812 AMOTL2Q9Y2J4 779 aa14.51□□□□□ -0.09
SSH1-205ENST00000546812 DIP2AQ14689 1571 aa14.51□□□□□ -0.09
SSH1-205ENST00000546812 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.49□□□□□ -0.09
SSH1-205ENST00000546812 CHGAP10645 457 aaKnown RBP14.49□□□□□ -0.09
SSH1-205ENST00000546812 FOXD1Q16676 465 aa14.48□□□□□ -0.09
SSH1-205ENST00000546812 NGLY1Q96IV0 654 aa14.48□□□□□ -0.09
SSH1-205ENST00000546812 CROCC2H7BZ55 1655 aa14.48□□□□□ -0.09
SSH1-205ENST00000546812 DCCP43146 1447 aa14.48□□□□□ -0.09
SSH1-205ENST00000546812 PTPN23Q9H3S7 1636 aa14.47□□□□□ -0.09
SSH1-205ENST00000546812 ASXL1Q8IXJ9 1541 aa14.46□□□□□ -0.09
SSH1-205ENST00000546812 TMEM131LA2VDJ0 1609 aa14.46□□□□□ -0.09
SSH1-205ENST00000546812 ZRANB1Q9UGI0 708 aa14.46□□□□□ -0.09
SSH1-205ENST00000546812 PTPRUQ92729 1446 aa14.46□□□□□ -0.09
SSH1-205ENST00000546812 ATAD2Q6PL18 1390 aa14.46□□□□□ -0.1
SSH1-205ENST00000546812 PNPLA6Q8IY17 1366 aa14.45□□□□□ -0.1
SSH1-205ENST00000546812 MST1RQ04912 1400 aa14.44□□□□□ -0.1
SSH1-205ENST00000546812 ANKRD50Q9ULJ7 1429 aa14.43□□□□□ -0.1
SSH1-205ENST00000546812 ADAMTS2O95450 1211 aa14.43□□□□□ -0.1
SSH1-205ENST00000546812 DDX17Q92841 729 aaKnown RBP14.43□□□□□ -0.1
SSH1-205ENST00000546812 ADGRL2O95490 1459 aa14.42□□□□□ -0.1
SSH1-205ENST00000546812 TRPM2O94759 1503 aa14.41□□□□□ -0.1
SSH1-205ENST00000546812 APLP2Q06481 763 aa14.41□□□□□ -0.1
SSH1-205ENST00000546812 TRPC5Q9UL62 973 aaPredicted RBP14.41□□□□□ -0.1
SSH1-205ENST00000546812 GCC2Q8IWJ2 1684 aa14.4□□□□□ -0.1
SSH1-205ENST00000546812 EP400Q96L91 3159 aa14.4□□□□□ -0.1
SSH1-205ENST00000546812 CCDC125Q86Z20 511 aa14.4□□□□□ -0.1
SSH1-205ENST00000546812 USP21Q9UK80 565 aa14.4□□□□□ -0.1
SSH1-205ENST00000546812 MYO5BQ9ULV0 1848 aa14.39□□□□□ -0.11
SSH1-205ENST00000546812 LOC105371045A0A1W2PR82 267 aa14.39□□□□□ -0.11
SSH1-205ENST00000546812 FNBP4Q8N3X1 1017 aaPredicted RBP14.39□□□□□ -0.11
SSH1-205ENST00000546812 NHSL1Q5SYE7 1610 aa14.37□□□□□ -0.11
SSH1-205ENST00000546812 METP08581 1390 aa14.36□□□□□ -0.11
SSH1-205ENST00000546812 ADGRL3Q9HAR2 1447 aa14.35□□□□□ -0.11
SSH1-205ENST00000546812 FAM50AQ14320 339 aaKnown RBP14.35□□□□□ -0.11
SSH1-205ENST00000546812 SOS2Q07890 1332 aaPredicted RBP14.35□□□□□ -0.11
SSH1-205ENST00000546812 SETBP1Q9Y6X0 1596 aa14.34□□□□□ -0.11
SSH1-205ENST00000546812 ATRNO75882 1429 aa14.34□□□□□ -0.11
SSH1-205ENST00000546812 UNC13BO14795 1591 aa14.34□□□□□ -0.11
SSH1-205ENST00000546812 PTCH1Q13635 1447 aa14.33□□□□□ -0.11
SSH1-205ENST00000546812 C1orf167Q5SNV9 1468 aa14.33□□□□□ -0.12
SSH1-205ENST00000546812 XRN1Q8IZH2 1706 aaKnown RBP14.32□□□□□ -0.12
SSH1-205ENST00000546812 ORAI2Q96SN7 254 aa14.32□□□□□ -0.12
SSH1-205ENST00000546812 ZNF326Q5BKZ1 582 aaKnown RBP14.3□□□□□ -0.12
SSH1-205ENST00000546812 GJD4Q96KN9 370 aaPredicted RBP14.29□□□□□ -0.12
SSH1-205ENST00000546812 NUP155O75694 1391 aa14.29□□□□□ -0.12
SSH1-205ENST00000546812 NRXN3Q9Y4C0 1643 aa14.29□□□□□ -0.12
SSH1-205ENST00000546812 E9PCH4 1651 aa14.29□□□□□ -0.12
SSH1-205ENST00000546812 BCL9LQ86UU0 1499 aa14.28□□□□□ -0.12
SSH1-205ENST00000546812 LAMC1P11047 1609 aa14.26□□□□□ -0.13
SSH1-205ENST00000546812 BLMP54132 1417 aaPredicted RBP14.25□□□□□ -0.13
SSH1-205ENST00000546812 MYOM2P54296 1465 aa14.25□□□□□ -0.13
SSH1-205ENST00000546812 ROCK1Q13464 1354 aa14.24□□□□□ -0.13
SSH1-205ENST00000546812 ROBO2Q9HCK4 1378 aa14.23□□□□□ -0.13
SSH1-205ENST00000546812 IQGAP3Q86VI3 1631 aa14.23□□□□□ -0.13
SSH1-205ENST00000546812 NPHP3Q7Z494 1330 aa14.23□□□□□ -0.13
SSH1-205ENST00000546812 DEFB132Q7Z7B7 95 aa14.23□□□□□ -0.13
SSH1-205ENST00000546812 NALCNQ8IZF0 1738 aa14.22□□□□□ -0.13
SSH1-205ENST00000546812 UNC5CLQ8IV45 518 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms