RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 CHD2O14647 1828 aaKnown RBP19.07■□□□□ 0.64
BRF1-207ENST00000546417 ADGRB3O60242 1522 aa19.05■□□□□ 0.64
BRF1-207ENST00000546417 NCOA3Q9Y6Q9 1424 aa19.05■□□□□ 0.64
BRF1-207ENST00000546417 LMTK2Q8IWU2 1503 aa19.05■□□□□ 0.64
BRF1-207ENST00000546417 SHPRHQ149N8 1683 aa19.05■□□□□ 0.64
BRF1-207ENST00000546417 SLC52A1Q9NWF4 448 aa19.04■□□□□ 0.64
BRF1-207ENST00000546417 CDK12Q9NYV4 1490 aaPredicted RBP19.03■□□□□ 0.64
BRF1-207ENST00000546417 CROCC2H7BZ55 1655 aa19.02■□□□□ 0.64
BRF1-207ENST00000546417 NOS1P29475 1434 aa19.02■□□□□ 0.64
BRF1-207ENST00000546417 HDGFP51858 240 aaKnown RBP19.02■□□□□ 0.64
BRF1-207ENST00000546417 C14orf37Q86TY3 774 aa19.02■□□□□ 0.64
BRF1-207ENST00000546417 AHDC1Q5TGY3 1603 aaPredicted RBP19.02■□□□□ 0.64
BRF1-207ENST00000546417 CADPS2Q86UW7 1296 aa19.01■□□□□ 0.63
BRF1-207ENST00000546417 PLEKHG1Q9ULL1 1385 aa19.01■□□□□ 0.63
BRF1-207ENST00000546417 ABCC5O15440 1437 aa19■□□□□ 0.63
BRF1-207ENST00000546417 PPP1R15AO75807 674 aaPredicted RBP18.99■□□□□ 0.63
BRF1-207ENST00000546417 ATF3P18847 181 aa18.99■□□□□ 0.63
BRF1-207ENST00000546417 C19orf44Q9H6X5 657 aa18.98■□□□□ 0.63
BRF1-207ENST00000546417 TBX22Q9Y458 520 aa18.98■□□□□ 0.63
BRF1-207ENST00000546417 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.97■□□□□ 0.63
BRF1-207ENST00000546417 KANK4Q5T7N3 995 aaPredicted RBP18.97■□□□□ 0.63
BRF1-207ENST00000546417 ZFYVE9O95405 1425 aa18.97■□□□□ 0.63
BRF1-207ENST00000546417 NUTM2BA6NNL0 878 aaPredicted RBP18.96■□□□□ 0.63
BRF1-207ENST00000546417 NUTM2EB1AL46 878 aaPredicted RBP18.96■□□□□ 0.63
BRF1-207ENST00000546417 NUTM2AQ8IVF1 878 aaPredicted RBP18.96■□□□□ 0.63
BRF1-207ENST00000546417 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
BRF1-207ENST00000546417 MYO5BQ9ULV0 1848 aa18.95■□□□□ 0.62
BRF1-207ENST00000546417 RIMS2Q9UQ26 1411 aa18.94■□□□□ 0.62
BRF1-207ENST00000546417 AFF2P51816 1311 aa18.94■□□□□ 0.62
BRF1-207ENST00000546417 ANKRD30AQ9BXX3 1397 aa18.93■□□□□ 0.62
BRF1-207ENST00000546417 DAPK1P53355 1430 aa18.93■□□□□ 0.62
BRF1-207ENST00000546417 DIP2AQ14689 1571 aa18.93■□□□□ 0.62
BRF1-207ENST00000546417 PTPN23Q9H3S7 1636 aa18.92■□□□□ 0.62
BRF1-207ENST00000546417 RPRD2Q5VT52 1461 aaKnown RBP18.92■□□□□ 0.62
BRF1-207ENST00000546417 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.92■□□□□ 0.62
BRF1-207ENST00000546417 BRINP3Q76B58 766 aa18.91■□□□□ 0.62
BRF1-207ENST00000546417 GCC2Q8IWJ2 1684 aa18.91■□□□□ 0.62
BRF1-207ENST00000546417 PIK3R4Q99570 1358 aa18.91■□□□□ 0.62
BRF1-207ENST00000546417 RBM6P78332 1123 aaKnown RBP18.9■□□□□ 0.62
BRF1-207ENST00000546417 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.62
BRF1-207ENST00000546417 TMEM131LA2VDJ0 1609 aa18.89■□□□□ 0.62
BRF1-207ENST00000546417 QTRT2Q9H974 415 aaKnown RBP18.89■□□□□ 0.61
BRF1-207ENST00000546417 CHIC2Q9UKJ5 165 aa18.89■□□□□ 0.61
BRF1-207ENST00000546417 RGS12O14924 1447 aa18.88■□□□□ 0.61
BRF1-207ENST00000546417 FOXD1Q16676 465 aa18.87■□□□□ 0.61
BRF1-207ENST00000546417 NUTM2DQ5VT03 806 aaPredicted RBP18.87■□□□□ 0.61
BRF1-207ENST00000546417 ADAMTS13Q76LX8 1427 aa18.87■□□□□ 0.61
BRF1-207ENST00000546417 SETD5Q9C0A6 1442 aa18.87■□□□□ 0.61
BRF1-207ENST00000546417 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
BRF1-207ENST00000546417 DCCP43146 1447 aa18.85■□□□□ 0.61
BRF1-207ENST00000546417 C8orf37Q96NL8 207 aa18.85■□□□□ 0.61
BRF1-207ENST00000546417 ASXL1Q8IXJ9 1541 aa18.84■□□□□ 0.61
BRF1-207ENST00000546417 CHGAP10645 457 aaKnown RBP18.84■□□□□ 0.61
BRF1-207ENST00000546417 AMOTL2Q9Y2J4 779 aa18.84■□□□□ 0.61
BRF1-207ENST00000546417 NGLY1Q96IV0 654 aa18.83■□□□□ 0.6
BRF1-207ENST00000546417 TRPM2O94759 1503 aa18.83■□□□□ 0.6
BRF1-207ENST00000546417 NHSL1Q5SYE7 1610 aa18.82■□□□□ 0.6
BRF1-207ENST00000546417 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
BRF1-207ENST00000546417 ZRANB1Q9UGI0 708 aa18.81■□□□□ 0.6
BRF1-207ENST00000546417 ADGRL2O95490 1459 aa18.78■□□□□ 0.6
BRF1-207ENST00000546417 MST1RQ04912 1400 aa18.78■□□□□ 0.6
BRF1-207ENST00000546417 PNPLA6Q8IY17 1366 aa18.78■□□□□ 0.6
BRF1-207ENST00000546417 PTPRUQ92729 1446 aa18.77■□□□□ 0.6
BRF1-207ENST00000546417 ANKRD50Q9ULJ7 1429 aa18.77■□□□□ 0.6
BRF1-207ENST00000546417 APLP2Q06481 763 aa18.76■□□□□ 0.59
BRF1-207ENST00000546417 UNC13BO14795 1591 aa18.74■□□□□ 0.59
BRF1-207ENST00000546417 ADAMTS2O95450 1211 aa18.73■□□□□ 0.59
BRF1-207ENST00000546417 XRN1Q8IZH2 1706 aaKnown RBP18.73■□□□□ 0.59
BRF1-207ENST00000546417 CCDC125Q86Z20 511 aa18.72■□□□□ 0.59
BRF1-207ENST00000546417 DDX17Q92841 729 aaKnown RBP18.72■□□□□ 0.59
BRF1-207ENST00000546417 USP21Q9UK80 565 aa18.72■□□□□ 0.59
BRF1-207ENST00000546417 TRPC5Q9UL62 973 aaPredicted RBP18.72■□□□□ 0.59
BRF1-207ENST00000546417 E9PCH4 1651 aa18.71■□□□□ 0.59
BRF1-207ENST00000546417 SETBP1Q9Y6X0 1596 aa18.69■□□□□ 0.58
BRF1-207ENST00000546417 ADGRL3Q9HAR2 1447 aa18.68■□□□□ 0.58
BRF1-207ENST00000546417 FNBP4Q8N3X1 1017 aaPredicted RBP18.67■□□□□ 0.58
BRF1-207ENST00000546417 NRXN3Q9Y4C0 1643 aa18.67■□□□□ 0.58
BRF1-207ENST00000546417 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
BRF1-207ENST00000546417 FAM50AQ14320 339 aaKnown RBP18.65■□□□□ 0.58
BRF1-207ENST00000546417 ATRNO75882 1429 aa18.65■□□□□ 0.58
BRF1-207ENST00000546417 LAMC1P11047 1609 aa18.64■□□□□ 0.57
BRF1-207ENST00000546417 EP400Q96L91 3159 aa18.64■□□□□ 0.57
BRF1-207ENST00000546417 NALCNQ8IZF0 1738 aa18.64■□□□□ 0.57
BRF1-207ENST00000546417 LOC105371045A0A1W2PR82 267 aa18.64■□□□□ 0.57
BRF1-207ENST00000546417 METP08581 1390 aa18.64■□□□□ 0.57
BRF1-207ENST00000546417 C1orf167Q5SNV9 1468 aa18.64■□□□□ 0.57
BRF1-207ENST00000546417 SOS2Q07890 1332 aaPredicted RBP18.63■□□□□ 0.57
BRF1-207ENST00000546417 IQGAP3Q86VI3 1631 aa18.63■□□□□ 0.57
BRF1-207ENST00000546417 ZNF326Q5BKZ1 582 aaKnown RBP18.6■□□□□ 0.57
BRF1-207ENST00000546417 ORAI2Q96SN7 254 aa18.58■□□□□ 0.56
BRF1-207ENST00000546417 COL22A1Q8NFW1 1626 aaPredicted RBP18.58■□□□□ 0.56
BRF1-207ENST00000546417 GJD4Q96KN9 370 aaPredicted RBP18.56■□□□□ 0.56
BRF1-207ENST00000546417 NUP155O75694 1391 aa18.55■□□□□ 0.56
BRF1-207ENST00000546417 BCL9LQ86UU0 1499 aa18.55■□□□□ 0.56
BRF1-207ENST00000546417 MARF1Q9Y4F3 1742 aaKnown RBP18.54■□□□□ 0.56
BRF1-207ENST00000546417 BLMP54132 1417 aaPredicted RBP18.54■□□□□ 0.56
BRF1-207ENST00000546417 SPHKAPQ2M3C7 1700 aa18.53■□□□□ 0.56
BRF1-207ENST00000546417 MYOM2P54296 1465 aa18.52■□□□□ 0.56
BRF1-207ENST00000546417 ROCK1Q13464 1354 aa18.52■□□□□ 0.55
BRF1-207ENST00000546417 NPHP3Q7Z494 1330 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms