RNA–Protein interactions for RNA: ENST00000545595.6

CACNA2D4-217, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 1,615 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-217ENST00000545595 MYO5BQ9ULV0 1848 aa21.9■■□□□ 1.1
CACNA2D4-217ENST00000545595 ST20-MTHFSA0A0A6YYL1 179 aa21.9■■□□□ 1.1
CACNA2D4-217ENST00000545595 MLECQ14165 292 aa21.9■■□□□ 1.1
CACNA2D4-217ENST00000545595 ZMYM3Q14202 1370 aa21.88■■□□□ 1.09
CACNA2D4-217ENST00000545595 ESF1Q9H501 851 aaKnown RBP21.88■■□□□ 1.09
CACNA2D4-217ENST00000545595 RPGRIP1LQ68CZ1 1315 aa21.88■■□□□ 1.09
CACNA2D4-217ENST00000545595 TMEM131LA2VDJ0 1609 aa21.87■■□□□ 1.09
CACNA2D4-217ENST00000545595 NEXMIFQ5QGS0 1516 aa21.87■■□□□ 1.09
CACNA2D4-217ENST00000545595 ANP32CO43423 234 aa21.86■■□□□ 1.09
CACNA2D4-217ENST00000545595 IDI1Q13907 227 aa21.86■■□□□ 1.09
CACNA2D4-217ENST00000545595 ADGRF5Q8IZF2 1346 aa21.86■■□□□ 1.09
CACNA2D4-217ENST00000545595 CHGAP10645 457 aaKnown RBP21.85■■□□□ 1.09
CACNA2D4-217ENST00000545595 FBXO31Q5XUX0 539 aaPredicted RBP21.84■■□□□ 1.09
CACNA2D4-217ENST00000545595 SCAF11Q99590 1463 aaKnown RBP21.84■■□□□ 1.09
CACNA2D4-217ENST00000545595 PIK3C2GO75747 1445 aa21.83■■□□□ 1.09
CACNA2D4-217ENST00000545595 SETBP1Q9Y6X0 1596 aa21.83■■□□□ 1.09
CACNA2D4-217ENST00000545595 YTHDC1Q96MU7 727 aaKnown RBP21.8■■□□□ 1.08
CACNA2D4-217ENST00000545595 TESK2Q96S53 571 aa21.8■■□□□ 1.08
CACNA2D4-217ENST00000545595 ZFYVE9O95405 1425 aa21.78■■□□□ 1.08
CACNA2D4-217ENST00000545595 CCER2I3L3R5 266 aa21.78■■□□□ 1.08
CACNA2D4-217ENST00000545595 FER1L4A9Z1Z3 1794 aa21.78■■□□□ 1.08
CACNA2D4-217ENST00000545595 CFAP70Q5T0N1 1121 aa21.77■■□□□ 1.08
CACNA2D4-217ENST00000545595 MYO3AQ8NEV4 1616 aa21.77■■□□□ 1.08
CACNA2D4-217ENST00000545595 ADGRB1O14514 1584 aa21.76■■□□□ 1.07
CACNA2D4-217ENST00000545595 DISP3Q9P2K9 1392 aa21.75■■□□□ 1.07
CACNA2D4-217ENST00000545595 EIF3AQ14152 1382 aaKnown RBP21.75■■□□□ 1.07
CACNA2D4-217ENST00000545595 KDM5AP29375 1690 aaKnown RBP21.75■■□□□ 1.07
CACNA2D4-217ENST00000545595 CENPBP07199 599 aaPredicted RBP21.74■■□□□ 1.07
CACNA2D4-217ENST00000545595 VGFO15240 615 aaPredicted RBP21.73■■□□□ 1.07
CACNA2D4-217ENST00000545595 POLR3GLQ9BT43 218 aa21.73■■□□□ 1.07
CACNA2D4-217ENST00000545595 TNRQ92752 1358 aa21.73■■□□□ 1.07
CACNA2D4-217ENST00000545595 C3P01024 1663 aa21.73■■□□□ 1.07
CACNA2D4-217ENST00000545595 A2ML1A8K2U0 1454 aa21.72■■□□□ 1.07
CACNA2D4-217ENST00000545595 C14orf93Q9H972 538 aaKnown RBP21.71■■□□□ 1.07
CACNA2D4-217ENST00000545595 NLRP1Q9C000 1473 aa21.69■■□□□ 1.06
CACNA2D4-217ENST00000545595 ADAMTSL3P82987 1691 aa21.68■■□□□ 1.06
CACNA2D4-217ENST00000545595 TMF1P82094 1093 aa21.68■■□□□ 1.06
CACNA2D4-217ENST00000545595 PRKRIP1Q9H875 184 aaPredicted RBP21.67■■□□□ 1.06
CACNA2D4-217ENST00000545595 STAG3Q9UJ98 1225 aa21.66■■□□□ 1.06
CACNA2D4-217ENST00000545595 ARHGEF28Q8N1W1 1705 aaKnown RBP21.65■■□□□ 1.06
CACNA2D4-217ENST00000545595 ASXL1Q8IXJ9 1541 aa21.65■■□□□ 1.06
CACNA2D4-217ENST00000545595 QRICH2Q9H0J4 1663 aa21.65■■□□□ 1.06
CACNA2D4-217ENST00000545595 NUTM2DQ5VT03 806 aaPredicted RBP21.65■■□□□ 1.06
CACNA2D4-217ENST00000545595 MYOM1P52179 1685 aa21.64■■□□□ 1.06
CACNA2D4-217ENST00000545595 SBNO2Q9Y2G9 1366 aa21.63■■□□□ 1.05
CACNA2D4-217ENST00000545595 UBR1Q8IWV7 1749 aa21.63■■□□□ 1.05
CACNA2D4-217ENST00000545595 CEBPAP49715 358 aaPredicted RBP21.62■■□□□ 1.05
CACNA2D4-217ENST00000545595 RIMS2Q9UQ26 1411 aa21.6■■□□□ 1.05
CACNA2D4-217ENST00000545595 SETD1AO15047 1707 aaKnown RBP21.6■■□□□ 1.05
CACNA2D4-217ENST00000545595 RIMS1Q86UR5 1692 aaKnown RBP21.6■■□□□ 1.05
CACNA2D4-217ENST00000545595 ALKQ9UM73 1620 aa21.59■■□□□ 1.05
CACNA2D4-217ENST00000545595 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.58■■□□□ 1.05
CACNA2D4-217ENST00000545595 HDGFP51858 240 aaKnown RBP21.58■■□□□ 1.04
CACNA2D4-217ENST00000545595 TMEM132EQ6IEE7 984 aa21.58■■□□□ 1.04
CACNA2D4-217ENST00000545595 CENPJQ9HC77 1338 aaPredicted RBP21.57■■□□□ 1.04
CACNA2D4-217ENST00000545595 CDCA8Q53HL2 280 aa21.57■■□□□ 1.04
CACNA2D4-217ENST00000545595 TMEM2Q9UHN6 1383 aa21.56■■□□□ 1.04
CACNA2D4-217ENST00000545595 SLC24A1O60721 1099 aa21.55■■□□□ 1.04
CACNA2D4-217ENST00000545595 NRXN3Q9Y4C0 1643 aa21.55■■□□□ 1.04
CACNA2D4-217ENST00000545595 TRAK1Q9UPV9 953 aa21.55■■□□□ 1.04
CACNA2D4-217ENST00000545595 SETD1BQ9UPS6 1966 aaKnown RBP21.53■■□□□ 1.04
CACNA2D4-217ENST00000545595 PER1O15534 1290 aaPredicted RBP21.52■■□□□ 1.04
CACNA2D4-217ENST00000545595 KTN1Q86UP2 1357 aaKnown RBP21.52■■□□□ 1.04
CACNA2D4-217ENST00000545595 PTPRMP28827 1452 aa21.52■■□□□ 1.04
CACNA2D4-217ENST00000545595 SLIT1O75093 1534 aa21.52■■□□□ 1.03
CACNA2D4-217ENST00000545595 CCDC184Q52MB2 194 aa21.51■■□□□ 1.03
CACNA2D4-217ENST00000545595 ARHGAP23Q9P227 1491 aa21.51■■□□□ 1.03
CACNA2D4-217ENST00000545595 YTHDC2Q9H6S0 1430 aaKnown RBP21.5■■□□□ 1.03
CACNA2D4-217ENST00000545595 PANK3Q9H999 370 aa21.49■■□□□ 1.03
CACNA2D4-217ENST00000545595 PARD3Q8TEW0 1356 aa21.48■■□□□ 1.03
CACNA2D4-217ENST00000545595 TULP4Q9NRJ4 1543 aa21.48■■□□□ 1.03
CACNA2D4-217ENST00000545595 CEP170BQ9Y4F5 1589 aaPredicted RBP21.47■■□□□ 1.03
CACNA2D4-217ENST00000545595 THEMISQ8N1K5 641 aaPredicted RBP21.47■■□□□ 1.03
CACNA2D4-217ENST00000545595 MRS2Q9HD23 443 aa21.46■■□□□ 1.03
CACNA2D4-217ENST00000545595 ZNF142P52746 1687 aaPredicted RBP21.46■■□□□ 1.03
CACNA2D4-217ENST00000545595 RALBP1Q15311 655 aa21.45■■□□□ 1.02
CACNA2D4-217ENST00000545595 SENP3Q9H4L4 574 aaPredicted RBP21.45■■□□□ 1.02
CACNA2D4-217ENST00000545595 DLC1Q96QB1 1528 aa21.45■■□□□ 1.02
CACNA2D4-217ENST00000545595 PLEKHG1Q9ULL1 1385 aa21.44■■□□□ 1.02
CACNA2D4-217ENST00000545595 CNGB1Q14028 1251 aaPredicted RBP21.44■■□□□ 1.02
CACNA2D4-217ENST00000545595 KNDC1Q76NI1 1749 aa21.43■■□□□ 1.02
CACNA2D4-217ENST00000545595 MYBBP1AQ9BQG0 1328 aaKnown RBP21.42■■□□□ 1.02
CACNA2D4-217ENST00000545595 EID1Q9Y6B2 187 aa21.41■■□□□ 1.02
CACNA2D4-217ENST00000545595 LRPPRCP42704 1394 aaKnown RBP21.4■■□□□ 1.02
CACNA2D4-217ENST00000545595 LTKP29376 864 aa21.4■■□□□ 1.02
CACNA2D4-217ENST00000545595 STK26Q9P289 416 aa21.4■■□□□ 1.02
CACNA2D4-217ENST00000545595 PLPPR3Q6T4P5 718 aa21.4■■□□□ 1.02
CACNA2D4-217ENST00000545595 ABCC11Q96J66 1382 aa21.39■■□□□ 1.01
CACNA2D4-217ENST00000545595 TXNDC2Q86VQ3 553 aa21.39■■□□□ 1.01
CACNA2D4-217ENST00000545595 MED14O60244 1454 aa21.38■■□□□ 1.01
CACNA2D4-217ENST00000545595 BRD4O60885 1362 aaPredicted RBP21.38■■□□□ 1.01
CACNA2D4-217ENST00000545595 ADAMTS13Q76LX8 1427 aa21.38■■□□□ 1.01
CACNA2D4-217ENST00000545595 EVC2Q86UK5 1308 aa21.37■■□□□ 1.01
CACNA2D4-217ENST00000545595 SCAF1Q9H7N4 1312 aaKnown RBP21.37■■□□□ 1.01
CACNA2D4-217ENST00000545595 PUS7Q96PZ0 661 aaKnown RBP21.37■■□□□ 1.01
CACNA2D4-217ENST00000545595 NPC1L1Q9UHC9 1359 aa21.36■■□□□ 1.01
CACNA2D4-217ENST00000545595 KNSTRNQ9Y448 316 aa21.36■■□□□ 1.01
CACNA2D4-217ENST00000545595 TECPR2O15040 1411 aa21.36■■□□□ 1.01
CACNA2D4-217ENST00000545595 METP08581 1390 aa21.35■■□□□ 1.01
CACNA2D4-217ENST00000545595 CPS1P31327 1500 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms