RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 MYOM2P54296 1465 aa22.66■■□□□ 1.22
XRCC1-202ENST00000543982 RALGAPBQ86X10 1494 aa22.66■■□□□ 1.22
XRCC1-202ENST00000543982 NRXN1Q9ULB1 1477 aa22.66■■□□□ 1.22
XRCC1-202ENST00000543982 ZNF316A6NFI3 1004 aaPredicted RBP22.65■■□□□ 1.22
XRCC1-202ENST00000543982 STAC3Q96MF2 364 aa22.65■■□□□ 1.22
XRCC1-202ENST00000543982 IFT172Q9UG01 1749 aa22.65■■□□□ 1.22
XRCC1-202ENST00000543982 NLRP1Q9C000 1473 aa22.65■■□□□ 1.22
XRCC1-202ENST00000543982 HSPA5P11021 654 aaKnown RBP22.63■■□□□ 1.21
XRCC1-202ENST00000543982 PPLO60437 1756 aa22.63■■□□□ 1.21
XRCC1-202ENST00000543982 RIMS2Q9UQ26 1411 aa22.63■■□□□ 1.21
XRCC1-202ENST00000543982 VGFO15240 615 aaPredicted RBP22.62■■□□□ 1.21
XRCC1-202ENST00000543982 ROCK2O75116 1388 aaKnown RBP22.62■■□□□ 1.21
XRCC1-202ENST00000543982 CARD11Q9BXL7 1154 aa22.61■■□□□ 1.21
XRCC1-202ENST00000543982 ZFYVE9O95405 1425 aa22.61■■□□□ 1.21
XRCC1-202ENST00000543982 TRPM1Q7Z4N2 1603 aa22.61■■□□□ 1.21
XRCC1-202ENST00000543982 PIK3C2GO75747 1445 aa22.6■■□□□ 1.21
XRCC1-202ENST00000543982 LTKP29376 864 aa22.59■■□□□ 1.21
XRCC1-202ENST00000543982 UBR1Q8IWV7 1749 aa22.59■■□□□ 1.21
XRCC1-202ENST00000543982 TMEM2Q9UHN6 1383 aa22.59■■□□□ 1.21
XRCC1-202ENST00000543982 C14orf93Q9H972 538 aaKnown RBP22.58■■□□□ 1.21
XRCC1-202ENST00000543982 MYO3AQ8NEV4 1616 aa22.58■■□□□ 1.21
XRCC1-202ENST00000543982 GPRASP1Q5JY77 1395 aa22.58■■□□□ 1.21
XRCC1-202ENST00000543982 EIF4G2P78344 907 aaKnown RBP eCLIP22.57■■□□□ 1.2
XRCC1-202ENST00000543982 TMEM132EQ6IEE7 984 aa22.56■■□□□ 1.2
XRCC1-202ENST00000543982 USP47Q96K76 1375 aa22.55■■□□□ 1.2
XRCC1-202ENST00000543982 THEMISQ8N1K5 641 aaPredicted RBP22.53■■□□□ 1.2
XRCC1-202ENST00000543982 CEP170BQ9Y4F5 1589 aaPredicted RBP22.52■■□□□ 1.2
XRCC1-202ENST00000543982 C11orf95C9JLR9 678 aaPredicted RBP22.52■■□□□ 1.2
XRCC1-202ENST00000543982 TXNDC2Q86VQ3 553 aa22.52■■□□□ 1.2
XRCC1-202ENST00000543982 KDM5AP29375 1690 aaKnown RBP22.51■■□□□ 1.19
XRCC1-202ENST00000543982 ARHGAP23Q9P227 1491 aa22.51■■□□□ 1.19
XRCC1-202ENST00000543982 ST20-MTHFSA0A0A6YYL1 179 aa22.5■■□□□ 1.19
XRCC1-202ENST00000543982 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.5■■□□□ 1.19
XRCC1-202ENST00000543982 SLIT1O75093 1534 aa22.48■■□□□ 1.19
XRCC1-202ENST00000543982 ADGRB1O14514 1584 aa22.48■■□□□ 1.19
XRCC1-202ENST00000543982 SETD1BQ9UPS6 1966 aaKnown RBP22.46■■□□□ 1.19
XRCC1-202ENST00000543982 ASXL1Q8IXJ9 1541 aa22.45■■□□□ 1.18
XRCC1-202ENST00000543982 HDGFP51858 240 aaKnown RBP22.45■■□□□ 1.18
XRCC1-202ENST00000543982 KIAA1210Q9ULL0 1709 aa22.45■■□□□ 1.18
XRCC1-202ENST00000543982 ALKQ9UM73 1620 aa22.44■■□□□ 1.18
XRCC1-202ENST00000543982 NRXN3Q9Y4C0 1643 aa22.43■■□□□ 1.18
XRCC1-202ENST00000543982 TRAK1Q9UPV9 953 aa22.43■■□□□ 1.18
XRCC1-202ENST00000543982 EID1Q9Y6B2 187 aa22.43■■□□□ 1.18
XRCC1-202ENST00000543982 METP08581 1390 aa22.42■■□□□ 1.18
XRCC1-202ENST00000543982 ZNF142P52746 1687 aaPredicted RBP22.42■■□□□ 1.18
XRCC1-202ENST00000543982 SCAF11Q99590 1463 aaKnown RBP22.42■■□□□ 1.18
XRCC1-202ENST00000543982 LAMC1P11047 1609 aa22.42■■□□□ 1.18
XRCC1-202ENST00000543982 PLEKHG1Q9ULL1 1385 aa22.42■■□□□ 1.18
XRCC1-202ENST00000543982 ADAMTS13Q76LX8 1427 aa22.42■■□□□ 1.18
XRCC1-202ENST00000543982 BCANQ96GW7 911 aa22.41■■□□□ 1.18
XRCC1-202ENST00000543982 SLC26A8Q96RN1 970 aa22.41■■□□□ 1.18
XRCC1-202ENST00000543982 TESK2Q96S53 571 aa22.41■■□□□ 1.18
XRCC1-202ENST00000543982 STK26Q9P289 416 aa22.41■■□□□ 1.18
XRCC1-202ENST00000543982 WASHC2AQ641Q2 1341 aa22.4■■□□□ 1.18
XRCC1-202ENST00000543982 SETBP1Q9Y6X0 1596 aa22.4■■□□□ 1.18
XRCC1-202ENST00000543982 HSPA2P54652 639 aa22.39■■□□□ 1.17
XRCC1-202ENST00000543982 NCKAP5LQ9HCH0 1330 aa22.38■■□□□ 1.17
XRCC1-202ENST00000543982 ANKLE2Q86XL3 938 aa22.38■■□□□ 1.17
XRCC1-202ENST00000543982 IQGAP1P46940 1657 aa22.37■■□□□ 1.17
XRCC1-202ENST00000543982 DIEXFQ68CQ4 756 aaKnown RBP22.36■■□□□ 1.17
XRCC1-202ENST00000543982 MED14O60244 1454 aa22.36■■□□□ 1.17
XRCC1-202ENST00000543982 SETD1AO15047 1707 aaKnown RBP22.35■■□□□ 1.17
XRCC1-202ENST00000543982 YTHDC2Q9H6S0 1430 aaKnown RBP22.35■■□□□ 1.17
XRCC1-202ENST00000543982 KIF7Q2M1P5 1343 aa22.34■■□□□ 1.17
XRCC1-202ENST00000543982 DDX10Q13206 875 aaKnown RBP22.33■■□□□ 1.17
XRCC1-202ENST00000543982 CCDC7Q96M83 1385 aa22.32■■□□□ 1.16
XRCC1-202ENST00000543982 DISP3Q9P2K9 1392 aa22.32■■□□□ 1.16
XRCC1-202ENST00000543982 TBX22Q9Y458 520 aa22.31■■□□□ 1.16
XRCC1-202ENST00000543982 LMTK3Q96Q04 1460 aa22.31■■□□□ 1.16
XRCC1-202ENST00000543982 PTPRUQ92729 1446 aa22.31■■□□□ 1.16
XRCC1-202ENST00000543982 LRPPRCP42704 1394 aaKnown RBP22.3■■□□□ 1.16
XRCC1-202ENST00000543982 SAFB2Q14151 953 aaKnown RBP eCLIP22.3■■□□□ 1.16
XRCC1-202ENST00000543982 WAPLQ7Z5K2 1190 aa22.29■■□□□ 1.16
XRCC1-202ENST00000543982 PRAM1Q96QH2 718 aa22.29■■□□□ 1.16
XRCC1-202ENST00000543982 CENPJQ9HC77 1338 aaPredicted RBP22.28■■□□□ 1.16
XRCC1-202ENST00000543982 PLEKHH1Q9ULM0 1364 aa22.28■■□□□ 1.16
XRCC1-202ENST00000543982 ABCC11Q96J66 1382 aa22.27■■□□□ 1.16
XRCC1-202ENST00000543982 POLR3GLQ9BT43 218 aa22.27■■□□□ 1.16
XRCC1-202ENST00000543982 EIF3AQ14152 1382 aaKnown RBP22.27■■□□□ 1.16
XRCC1-202ENST00000543982 NPHP4O75161 1426 aaPredicted RBP22.26■■□□□ 1.15
XRCC1-202ENST00000543982 AMOTL2Q9Y2J4 779 aa22.23■■□□□ 1.15
XRCC1-202ENST00000543982 ROBO2Q9HCK4 1378 aa22.23■■□□□ 1.15
XRCC1-202ENST00000543982 ARHGEF28Q8N1W1 1705 aaKnown RBP22.23■■□□□ 1.15
XRCC1-202ENST00000543982 TMF1P82094 1093 aa22.22■■□□□ 1.15
XRCC1-202ENST00000543982 POGKQ9P215 609 aa22.21■■□□□ 1.15
XRCC1-202ENST00000543982 MINK1Q8N4C8 1332 aaPredicted RBP22.2■■□□□ 1.14
XRCC1-202ENST00000543982 TECPR2O15040 1411 aa22.19■■□□□ 1.14
XRCC1-202ENST00000543982 KCNA6P17658 529 aa22.19■■□□□ 1.14
XRCC1-202ENST00000543982 SBNO2Q9Y2G9 1366 aa22.18■■□□□ 1.14
XRCC1-202ENST00000543982 DLC1Q96QB1 1528 aa22.18■■□□□ 1.14
XRCC1-202ENST00000543982 DIP2AQ14689 1571 aa22.16■■□□□ 1.14
XRCC1-202ENST00000543982 SIRT1Q96EB6 747 aa22.16■■□□□ 1.14
XRCC1-202ENST00000543982 QRICH2Q9H0J4 1663 aa22.16■■□□□ 1.14
XRCC1-202ENST00000543982 RBM33Q96EV2 1170 aaKnown RBP22.14■■□□□ 1.14
XRCC1-202ENST00000543982 POLR1AO95602 1720 aaPredicted RBP22.14■■□□□ 1.13
XRCC1-202ENST00000543982 TULP4Q9NRJ4 1543 aa22.13■■□□□ 1.13
XRCC1-202ENST00000543982 FAM135BQ49AJ0 1406 aa22.13■■□□□ 1.13
XRCC1-202ENST00000543982 CABP2Q9NPB3 220 aa22.13■■□□□ 1.13
XRCC1-202ENST00000543982 CPS1P31327 1500 aa22.13■■□□□ 1.13
XRCC1-202ENST00000543982 PIK3R4Q99570 1358 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms