RNA–Protein interactions for RNA: ENST00000543604.1

AC053513.1-201, humanhuman

TSL 3 BASIC

Gene AC053513.1, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC053513.1-201ENST00000543604 ATP1B4Q9UN42 357 aaPredicted RBP13.26□□□□□ -0.29
AC053513.1-201ENST00000543604 DOK7Q18PE1 504 aa13.25□□□□□ -0.29
AC053513.1-201ENST00000543604 ESF1Q9H501 851 aaKnown RBP13.25□□□□□ -0.29
AC053513.1-201ENST00000543604 ZNF710Q8N1W2 664 aa13.24□□□□□ -0.29
AC053513.1-201ENST00000543604 TMC2Q8TDI7 906 aa13.24□□□□□ -0.29
AC053513.1-201ENST00000543604 ZNF518AQ6AHZ1 1483 aa13.23□□□□□ -0.29
AC053513.1-201ENST00000543604 FER1L4A9Z1Z3 1794 aa13.23□□□□□ -0.29
AC053513.1-201ENST00000543604 AFAP1Q8N556 730 aa13.23□□□□□ -0.29
AC053513.1-201ENST00000543604 BBXQ8WY36 941 aaPredicted RBP13.23□□□□□ -0.29
AC053513.1-201ENST00000543604 CDK13Q14004 1512 aaKnown RBP13.22□□□□□ -0.29
AC053513.1-201ENST00000543604 SIGLEC1Q9BZZ2 1709 aa13.22□□□□□ -0.29
AC053513.1-201ENST00000543604 PTPRTO14522 1441 aa13.21□□□□□ -0.3
AC053513.1-201ENST00000543604 FMN1Q68DA7 1419 aa13.21□□□□□ -0.3
AC053513.1-201ENST00000543604 PREX1Q8TCU6 1659 aa13.2□□□□□ -0.3
AC053513.1-201ENST00000543604 UBTFP17480 764 aaKnown RBP13.18□□□□□ -0.3
AC053513.1-201ENST00000543604 CLIP1P30622 1438 aa13.17□□□□□ -0.3
AC053513.1-201ENST00000543604 TRAPPC8Q9Y2L5 1435 aa13.17□□□□□ -0.3
AC053513.1-201ENST00000543604 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
AC053513.1-201ENST00000543604 EMP3P54852 163 aa13.17□□□□□ -0.3
AC053513.1-201ENST00000543604 HOXB1P14653 301 aaPredicted RBP13.16□□□□□ -0.3
AC053513.1-201ENST00000543604 ARHGAP5Q13017 1502 aa13.16□□□□□ -0.3
AC053513.1-201ENST00000543604 SETD1BQ9UPS6 1966 aaKnown RBP13.16□□□□□ -0.3
AC053513.1-201ENST00000543604 TROQ12816 1431 aaPredicted RBP13.15□□□□□ -0.3
AC053513.1-201ENST00000543604 GPHNQ9NQX3 736 aaPredicted RBP13.15□□□□□ -0.3
AC053513.1-201ENST00000543604 MLH3Q9UHC1 1453 aa13.15□□□□□ -0.3
AC053513.1-201ENST00000543604 IQSEC2Q5JU85 1478 aa13.14□□□□□ -0.31
AC053513.1-201ENST00000543604 KDM5CP41229 1560 aa13.14□□□□□ -0.31
AC053513.1-201ENST00000543604 STRCQ7RTU9 1775 aa13.14□□□□□ -0.31
AC053513.1-201ENST00000543604 CNTLNQ9NXG0 1405 aa13.13□□□□□ -0.31
AC053513.1-201ENST00000543604 GPR153Q6NV75 609 aa13.13□□□□□ -0.31
AC053513.1-201ENST00000543604 REREQ9P2R6 1566 aa13.12□□□□□ -0.31
AC053513.1-201ENST00000543604 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
AC053513.1-201ENST00000543604 ARSIQ5FYB1 569 aa13.12□□□□□ -0.31
AC053513.1-201ENST00000543604 CDAN1Q8IWY9 1227 aa13.12□□□□□ -0.31
AC053513.1-201ENST00000543604 KIF14Q15058 1648 aa13.12□□□□□ -0.31
AC053513.1-201ENST00000543604 SPATA31D1Q6ZQQ2 1576 aa13.11□□□□□ -0.31
AC053513.1-201ENST00000543604 MYO5CQ9NQX4 1742 aa13.11□□□□□ -0.31
AC053513.1-201ENST00000543604 FOXK1P85037 733 aa13.11□□□□□ -0.31
AC053513.1-201ENST00000543604 DSG2Q14126 1118 aa13.11□□□□□ -0.31
AC053513.1-201ENST00000543604 ZSWIM6Q9HCJ5 1215 aa13.11□□□□□ -0.31
AC053513.1-201ENST00000543604 AGLP35573 1532 aa13.11□□□□□ -0.31
AC053513.1-201ENST00000543604 NCOA1Q15788 1441 aa13.11□□□□□ -0.31
AC053513.1-201ENST00000543604 POTEB3A0JP26 581 aa13.1□□□□□ -0.31
AC053513.1-201ENST00000543604 POTEBQ6S5H4 581 aa13.1□□□□□ -0.31
AC053513.1-201ENST00000543604 PLPP6Q8IY26 295 aa13.1□□□□□ -0.31
AC053513.1-201ENST00000543604 KHSRPQ92945 711 aaKnown RBP eCLIP13.1□□□□□ -0.31
AC053513.1-201ENST00000543604 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.1□□□□□ -0.31
AC053513.1-201ENST00000543604 NPATQ14207 1427 aa13.09□□□□□ -0.31
AC053513.1-201ENST00000543604 CRISPLD2Q9H0B8 497 aa13.09□□□□□ -0.31
AC053513.1-201ENST00000543604 DIP2CQ9Y2E4 1556 aa13.09□□□□□ -0.31
AC053513.1-201ENST00000543604 LTBP4Q8N2S1 1624 aa13.09□□□□□ -0.31
AC053513.1-201ENST00000543604 UBAP1LF5GYI3 381 aa13.08□□□□□ -0.32
AC053513.1-201ENST00000543604 SPRYD3Q8NCJ5 442 aa13.08□□□□□ -0.32
AC053513.1-201ENST00000543604 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
AC053513.1-201ENST00000543604 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
AC053513.1-201ENST00000543604 ARHGAP35Q9NRY4 1499 aa13.08□□□□□ -0.32
AC053513.1-201ENST00000543604 NCKAP5LQ9HCH0 1330 aa13.08□□□□□ -0.32
AC053513.1-201ENST00000543604 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
AC053513.1-201ENST00000543604 ZMYM3Q14202 1370 aa13.07□□□□□ -0.32
AC053513.1-201ENST00000543604 PDE4AP27815 886 aa13.06□□□□□ -0.32
AC053513.1-201ENST00000543604 SLC34A2O95436 690 aa13.05□□□□□ -0.32
AC053513.1-201ENST00000543604 PAXIP1Q6ZW49 1069 aaPredicted RBP13.05□□□□□ -0.32
AC053513.1-201ENST00000543604 CFAP44Q96MT7 982 aa13.05□□□□□ -0.32
AC053513.1-201ENST00000543604 ERBB3P21860 1342 aa13.05□□□□□ -0.32
AC053513.1-201ENST00000543604 ZNF335Q9H4Z2 1342 aaPredicted RBP13.05□□□□□ -0.32
AC053513.1-201ENST00000543604 C3P01024 1663 aa13.05□□□□□ -0.32
AC053513.1-201ENST00000543604 ABCA6Q8N139 1617 aa13.04□□□□□ -0.32
AC053513.1-201ENST00000543604 PCDHGA4Q9Y5G9 962 aa13.04□□□□□ -0.32
AC053513.1-201ENST00000543604 SPAG9O60271 1321 aaKnown RBP13.04□□□□□ -0.32
AC053513.1-201ENST00000543604 LARP6Q9BRS8 491 aaKnown RBP13.03□□□□□ -0.32
AC053513.1-201ENST00000543604 ZNF777Q9ULD5 760 aaPredicted RBP13.03□□□□□ -0.32
AC053513.1-201ENST00000543604 ABCC1P33527 1531 aa13.03□□□□□ -0.32
AC053513.1-201ENST00000543604 CAMSAP1Q5T5Y3 1602 aa13.02□□□□□ -0.32
AC053513.1-201ENST00000543604 CCDC18Q5T9S5 1454 aa13.02□□□□□ -0.33
AC053513.1-201ENST00000543604 PPP1R15BQ5SWA1 713 aa13.01□□□□□ -0.33
AC053513.1-201ENST00000543604 NUDT7P0C024 238 aa13□□□□□ -0.33
AC053513.1-201ENST00000543604 PLA2R1Q13018 1463 aa12.99□□□□□ -0.33
AC053513.1-201ENST00000543604 CASKIN1Q8WXD9 1431 aa12.99□□□□□ -0.33
AC053513.1-201ENST00000543604 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
AC053513.1-201ENST00000543604 VARS2Q5ST30 1063 aaKnown RBP12.99□□□□□ -0.33
AC053513.1-201ENST00000543604 GGT6Q6P531 493 aa12.99□□□□□ -0.33
AC053513.1-201ENST00000543604 TOM1O60784 492 aa12.98□□□□□ -0.33
AC053513.1-201ENST00000543604 PTCD2Q8WV60 388 aaKnown RBP12.98□□□□□ -0.33
AC053513.1-201ENST00000543604 CDC42BPBQ9Y5S2 1711 aa12.98□□□□□ -0.33
AC053513.1-201ENST00000543604 PREX2Q70Z35 1606 aa12.98□□□□□ -0.33
AC053513.1-201ENST00000543604 PLSCR2Q9NRY7 297 aa12.97□□□□□ -0.33
AC053513.1-201ENST00000543604 CFDP1Q9UEE9 299 aaPredicted RBP12.97□□□□□ -0.33
AC053513.1-201ENST00000543604 TCOF1Q13428 1488 aaKnown RBP12.97□□□□□ -0.33
AC053513.1-201ENST00000543604 KIDINS220Q9ULH0 1771 aa12.97□□□□□ -0.33
AC053513.1-201ENST00000543604 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.33
AC053513.1-201ENST00000543604 SAMD9LQ8IVG5 1584 aa12.96□□□□□ -0.33
AC053513.1-201ENST00000543604 DDX27Q96GQ7 796 aaKnown RBP12.96□□□□□ -0.33
AC053513.1-201ENST00000543604 PTPRKQ15262 1439 aa12.96□□□□□ -0.34
AC053513.1-201ENST00000543604 PLEKHH2Q8IVE3 1493 aa12.95□□□□□ -0.34
AC053513.1-201ENST00000543604 MROH2AA6NES4 1674 aa12.95□□□□□ -0.34
AC053513.1-201ENST00000543604 ITSN2Q9NZM3 1697 aa12.94□□□□□ -0.34
AC053513.1-201ENST00000543604 A2MP01023 1474 aa12.94□□□□□ -0.34
AC053513.1-201ENST00000543604 ZNF316A6NFI3 1004 aaPredicted RBP12.94□□□□□ -0.34
AC053513.1-201ENST00000543604 HSPA1LP34931 641 aa12.94□□□□□ -0.34
AC053513.1-201ENST00000543604 PIP4K2BP78356 416 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms