RNA–Protein interactions for RNA: ENST00000543566.5

ARL6IP4-220, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARL6IP4, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL6IP4-220ENST00000543566 GPRASP1Q5JY77 1395 aa29.48■■■□□ 2.31
ARL6IP4-220ENST00000543566 CHGAP10645 457 aaKnown RBP29.47■■■□□ 2.31
ARL6IP4-220ENST00000543566 NLRP1Q9C000 1473 aa29.47■■■□□ 2.31
ARL6IP4-220ENST00000543566 KIAA1210Q9ULL0 1709 aa29.47■■■□□ 2.31
ARL6IP4-220ENST00000543566 KDM5AP29375 1690 aaKnown RBP29.47■■■□□ 2.31
ARL6IP4-220ENST00000543566 CARD11Q9BXL7 1154 aa29.47■■■□□ 2.31
ARL6IP4-220ENST00000543566 NEXMIFQ5QGS0 1516 aa29.46■■■□□ 2.31
ARL6IP4-220ENST00000543566 A2ML1A8K2U0 1454 aa29.45■■■□□ 2.31
ARL6IP4-220ENST00000543566 NRXN1Q9ULB1 1477 aa29.45■■■□□ 2.31
ARL6IP4-220ENST00000543566 MYO5BQ9ULV0 1848 aa29.44■■■□□ 2.3
ARL6IP4-220ENST00000543566 POLR1AO95602 1720 aaPredicted RBP29.43■■■□□ 2.3
ARL6IP4-220ENST00000543566 ZFYVE9O95405 1425 aa29.4■■■□□ 2.3
ARL6IP4-220ENST00000543566 PTPRMP28827 1452 aa29.39■■■□□ 2.3
ARL6IP4-220ENST00000543566 UBR1Q8IWV7 1749 aa29.38■■■□□ 2.29
ARL6IP4-220ENST00000543566 MYO3AQ8NEV4 1616 aa29.37■■■□□ 2.29
ARL6IP4-220ENST00000543566 NBPF1Q3BBV0 1214 aa29.37■■■□□ 2.29
ARL6IP4-220ENST00000543566 ADGRF5Q8IZF2 1346 aa29.37■■■□□ 2.29
ARL6IP4-220ENST00000543566 STAG3Q9UJ98 1225 aa29.35■■■□□ 2.29
ARL6IP4-220ENST00000543566 PIK3C2GO75747 1445 aa29.33■■■□□ 2.29
ARL6IP4-220ENST00000543566 IQGAP1P46940 1657 aa29.33■■■□□ 2.29
ARL6IP4-220ENST00000543566 VGFO15240 615 aaPredicted RBP29.32■■■□□ 2.28
ARL6IP4-220ENST00000543566 PLPPR3Q6T4P5 718 aa29.31■■■□□ 2.28
ARL6IP4-220ENST00000543566 RIMS2Q9UQ26 1411 aa29.3■■■□□ 2.28
ARL6IP4-220ENST00000543566 WASHC2AQ641Q2 1341 aa29.3■■■□□ 2.28
ARL6IP4-220ENST00000543566 DDX10Q13206 875 aaKnown RBP29.29■■■□□ 2.28
ARL6IP4-220ENST00000543566 CCDC7Q96M83 1385 aa29.28■■■□□ 2.28
ARL6IP4-220ENST00000543566 TMEM2Q9UHN6 1383 aa29.28■■■□□ 2.28
ARL6IP4-220ENST00000543566 CEP170BQ9Y4F5 1589 aaPredicted RBP29.27■■■□□ 2.28
ARL6IP4-220ENST00000543566 SETBP1Q9Y6X0 1596 aa29.27■■■□□ 2.28
ARL6IP4-220ENST00000543566 ZNF142P52746 1687 aaPredicted RBP29.26■■■□□ 2.28
ARL6IP4-220ENST00000543566 SCAF11Q99590 1463 aaKnown RBP29.25■■■□□ 2.27
ARL6IP4-220ENST00000543566 SETD1BQ9UPS6 1966 aaKnown RBP29.24■■■□□ 2.27
ARL6IP4-220ENST00000543566 ARHGAP23Q9P227 1491 aa29.24■■■□□ 2.27
ARL6IP4-220ENST00000543566 ST20-MTHFSA0A0A6YYL1 179 aa29.24■■■□□ 2.27
ARL6IP4-220ENST00000543566 SLIT1O75093 1534 aa29.24■■■□□ 2.27
ARL6IP4-220ENST00000543566 KDM4FA0A1W2PPD8 638 aa29.23■■■□□ 2.27
ARL6IP4-220ENST00000543566 C14orf93Q9H972 538 aaKnown RBP29.23■■■□□ 2.27
ARL6IP4-220ENST00000543566 C11orf95C9JLR9 678 aaPredicted RBP29.22■■■□□ 2.27
ARL6IP4-220ENST00000543566 NUTM2DQ5VT03 806 aaPredicted RBP29.22■■■□□ 2.27
ARL6IP4-220ENST00000543566 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.22■■■□□ 2.27
ARL6IP4-220ENST00000543566 CFAP70Q5T0N1 1121 aa29.22■■■□□ 2.27
ARL6IP4-220ENST00000543566 KIF7Q2M1P5 1343 aa29.2■■■□□ 2.27
ARL6IP4-220ENST00000543566 HDGFP51858 240 aaKnown RBP29.18■■■□□ 2.26
ARL6IP4-220ENST00000543566 THEMISQ8N1K5 641 aaPredicted RBP29.18■■■□□ 2.26
ARL6IP4-220ENST00000543566 MIER1Q8N108 512 aa29.18■■■□□ 2.26
ARL6IP4-220ENST00000543566 EIF3AQ14152 1382 aaKnown RBP29.17■■■□□ 2.26
ARL6IP4-220ENST00000543566 ADGRB1O14514 1584 aa29.17■■■□□ 2.26
ARL6IP4-220ENST00000543566 NRXN3Q9Y4C0 1643 aa29.12■■■□□ 2.25
ARL6IP4-220ENST00000543566 ALKQ9UM73 1620 aa29.12■■■□□ 2.25
ARL6IP4-220ENST00000543566 ASXL1Q8IXJ9 1541 aa29.1■■■□□ 2.25
ARL6IP4-220ENST00000543566 LTKP29376 864 aa29.1■■■□□ 2.25
ARL6IP4-220ENST00000543566 TESK2Q96S53 571 aa29.09■■■□□ 2.25
ARL6IP4-220ENST00000543566 PLEKHG1Q9ULL1 1385 aa29.09■■■□□ 2.25
ARL6IP4-220ENST00000543566 SETD1AO15047 1707 aaKnown RBP29.09■■■□□ 2.25
ARL6IP4-220ENST00000543566 TXNDC2Q86VQ3 553 aa29.07■■■□□ 2.24
ARL6IP4-220ENST00000543566 EID1Q9Y6B2 187 aa29.06■■■□□ 2.24
ARL6IP4-220ENST00000543566 TMF1P82094 1093 aa29.03■■■□□ 2.24
ARL6IP4-220ENST00000543566 ADAMTS13Q76LX8 1427 aa29.02■■■□□ 2.24
ARL6IP4-220ENST00000543566 TMEM132EQ6IEE7 984 aa29.01■■■□□ 2.24
ARL6IP4-220ENST00000543566 DISP3Q9P2K9 1392 aa29.01■■■□□ 2.23
ARL6IP4-220ENST00000543566 MED14O60244 1454 aa29.01■■■□□ 2.23
ARL6IP4-220ENST00000543566 POLR3GLQ9BT43 218 aa29.01■■■□□ 2.23
ARL6IP4-220ENST00000543566 ARHGEF28Q8N1W1 1705 aaKnown RBP29■■■□□ 2.23
ARL6IP4-220ENST00000543566 SLC24A1O60721 1099 aa28.99■■■□□ 2.23
ARL6IP4-220ENST00000543566 SBNO2Q9Y2G9 1366 aa28.98■■■□□ 2.23
ARL6IP4-220ENST00000543566 QRICH2Q9H0J4 1663 aa28.97■■■□□ 2.23
ARL6IP4-220ENST00000543566 ANP32CO43423 234 aa28.97■■■□□ 2.23
ARL6IP4-220ENST00000543566 YTHDC2Q9H6S0 1430 aaKnown RBP28.96■■■□□ 2.23
ARL6IP4-220ENST00000543566 ANKLE2Q86XL3 938 aa28.95■■■□□ 2.22
ARL6IP4-220ENST00000543566 SENP3Q9H4L4 574 aaPredicted RBP28.95■■■□□ 2.22
ARL6IP4-220ENST00000543566 TRAK1Q9UPV9 953 aa28.95■■■□□ 2.22
ARL6IP4-220ENST00000543566 CENPJQ9HC77 1338 aaPredicted RBP28.95■■■□□ 2.22
ARL6IP4-220ENST00000543566 DIP2AQ14689 1571 aa28.94■■■□□ 2.22
ARL6IP4-220ENST00000543566 METP08581 1390 aa28.93■■■□□ 2.22
ARL6IP4-220ENST00000543566 CDCA8Q53HL2 280 aa28.92■■■□□ 2.22
ARL6IP4-220ENST00000543566 LRPPRCP42704 1394 aaKnown RBP28.92■■■□□ 2.22
ARL6IP4-220ENST00000543566 DLC1Q96QB1 1528 aa28.9■■■□□ 2.22
ARL6IP4-220ENST00000543566 TBX22Q9Y458 520 aa28.9■■■□□ 2.22
ARL6IP4-220ENST00000543566 ABCC11Q96J66 1382 aa28.89■■■□□ 2.22
ARL6IP4-220ENST00000543566 LMTK3Q96Q04 1460 aa28.89■■■□□ 2.21
ARL6IP4-220ENST00000543566 BCANQ96GW7 911 aa28.88■■■□□ 2.21
ARL6IP4-220ENST00000543566 TECPR2O15040 1411 aa28.87■■■□□ 2.21
ARL6IP4-220ENST00000543566 KNDC1Q76NI1 1749 aa28.86■■■□□ 2.21
ARL6IP4-220ENST00000543566 SLC26A8Q96RN1 970 aa28.84■■■□□ 2.21
ARL6IP4-220ENST00000543566 NPHP4O75161 1426 aaPredicted RBP28.83■■■□□ 2.21
ARL6IP4-220ENST00000543566 STK26Q9P289 416 aa28.83■■■□□ 2.21
ARL6IP4-220ENST00000543566 MYOM1P52179 1685 aa28.82■■■□□ 2.2
ARL6IP4-220ENST00000543566 PIK3R4Q99570 1358 aa28.82■■■□□ 2.2
ARL6IP4-220ENST00000543566 CPS1P31327 1500 aa28.81■■■□□ 2.2
ARL6IP4-220ENST00000543566 SIRT1Q96EB6 747 aa28.81■■■□□ 2.2
ARL6IP4-220ENST00000543566 PTPRUQ92729 1446 aa28.81■■■□□ 2.2
ARL6IP4-220ENST00000543566 CCER2I3L3R5 266 aa28.8■■■□□ 2.2
ARL6IP4-220ENST00000543566 FAM135BQ49AJ0 1406 aa28.78■■■□□ 2.2
ARL6IP4-220ENST00000543566 NCKAP5LQ9HCH0 1330 aa28.78■■■□□ 2.2
ARL6IP4-220ENST00000543566 PRAM1Q96QH2 718 aa28.75■■■□□ 2.19
ARL6IP4-220ENST00000543566 TULP4Q9NRJ4 1543 aa28.75■■■□□ 2.19
ARL6IP4-220ENST00000543566 XRN1Q8IZH2 1706 aaKnown RBP28.75■■■□□ 2.19
ARL6IP4-220ENST00000543566 PRKRIP1Q9H875 184 aaPredicted RBP28.75■■■□□ 2.19
ARL6IP4-220ENST00000543566 HSPA2P54652 639 aa28.74■■■□□ 2.19
ARL6IP4-220ENST00000543566 POGKQ9P215 609 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms