RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 PANK3Q9H999 370 aa14.6□□□□□ -0.07
CDH4-201ENST00000543233 PLCH2O75038 1416 aa14.6□□□□□ -0.07
CDH4-201ENST00000543233 CLCN1P35523 988 aa14.6□□□□□ -0.07
CDH4-201ENST00000543233 BACH2Q9BYV9 841 aa14.6□□□□□ -0.07
CDH4-201ENST00000543233 AMER1Q5JTC6 1135 aaPredicted RBP14.59□□□□□ -0.07
CDH4-201ENST00000543233 PRAG1Q86YV5 1406 aa14.59□□□□□ -0.07
CDH4-201ENST00000543233 A2MP01023 1474 aa14.58□□□□□ -0.08
CDH4-201ENST00000543233 DISP3Q9P2K9 1392 aa14.58□□□□□ -0.08
CDH4-201ENST00000543233 SCAPERQ9BY12 1400 aa14.58□□□□□ -0.08
CDH4-201ENST00000543233 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
CDH4-201ENST00000543233 GTF2E1P29083 439 aaPredicted RBP14.57□□□□□ -0.08
CDH4-201ENST00000543233 MYBBP1AQ9BQG0 1328 aaKnown RBP14.56□□□□□ -0.08
CDH4-201ENST00000543233 KDM5DQ9BY66 1539 aa14.56□□□□□ -0.08
CDH4-201ENST00000543233 TMF1P82094 1093 aa14.55□□□□□ -0.08
CDH4-201ENST00000543233 GGT6Q6P531 493 aa14.55□□□□□ -0.08
CDH4-201ENST00000543233 TESK2Q96S53 571 aa14.55□□□□□ -0.08
CDH4-201ENST00000543233 NUDCQ9Y266 331 aa14.55□□□□□ -0.08
CDH4-201ENST00000543233 MYO5CQ9NQX4 1742 aa14.54□□□□□ -0.08
CDH4-201ENST00000543233 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
CDH4-201ENST00000543233 PRDM10Q9NQV6 1147 aa14.54□□□□□ -0.08
CDH4-201ENST00000543233 SHROOM2Q13796 1616 aa14.54□□□□□ -0.08
CDH4-201ENST00000543233 ZCCHC11Q5TAX3 1644 aaKnown RBP14.54□□□□□ -0.08
CDH4-201ENST00000543233 KTN1Q86UP2 1357 aaKnown RBP14.54□□□□□ -0.08
CDH4-201ENST00000543233 RALBP1Q15311 655 aa14.54□□□□□ -0.08
CDH4-201ENST00000543233 NUTM2DQ5VT03 806 aaPredicted RBP14.52□□□□□ -0.08
CDH4-201ENST00000543233 NLRP13Q86W25 1043 aa14.52□□□□□ -0.09
CDH4-201ENST00000543233 DUOX2Q9NRD8 1548 aa14.51□□□□□ -0.09
CDH4-201ENST00000543233 CDCA7LQ96GN5 454 aa14.51□□□□□ -0.09
CDH4-201ENST00000543233 TPM2P07951 284 aa14.5□□□□□ -0.09
CDH4-201ENST00000543233 CFAP70Q5T0N1 1121 aa14.5□□□□□ -0.09
CDH4-201ENST00000543233 STAC3Q96MF2 364 aa14.5□□□□□ -0.09
CDH4-201ENST00000543233 PER1O15534 1290 aaPredicted RBP14.5□□□□□ -0.09
CDH4-201ENST00000543233 SKAP1Q86WV1 359 aa14.5□□□□□ -0.09
CDH4-201ENST00000543233 PANK2Q9BZ23 570 aa14.5□□□□□ -0.09
CDH4-201ENST00000543233 FANCAO15360 1455 aa14.5□□□□□ -0.09
CDH4-201ENST00000543233 FAM13BQ9NYF5 915 aa14.49□□□□□ -0.09
CDH4-201ENST00000543233 GZF1Q9H116 711 aaPredicted RBP14.49□□□□□ -0.09
CDH4-201ENST00000543233 CENPJQ9HC77 1338 aaPredicted RBP14.49□□□□□ -0.09
CDH4-201ENST00000543233 ERBINQ96RT1 1412 aa14.49□□□□□ -0.09
CDH4-201ENST00000543233 VGLL3A8MV65 326 aa14.48□□□□□ -0.09
CDH4-201ENST00000543233 KNSTRNQ9Y448 316 aa14.48□□□□□ -0.09
CDH4-201ENST00000543233 GOLGA6L3A6NEY3 463 aa14.48□□□□□ -0.09
CDH4-201ENST00000543233 KANK1Q14678 1352 aa14.47□□□□□ -0.09
CDH4-201ENST00000543233 ABCC1P33527 1531 aa14.47□□□□□ -0.09
CDH4-201ENST00000543233 RIMBP3CA6NJZ7 1639 aa14.47□□□□□ -0.09
CDH4-201ENST00000543233 RIMBP3BA6NNM3 1639 aa14.47□□□□□ -0.09
CDH4-201ENST00000543233 RIMBP3Q9UFD9 1639 aa14.47□□□□□ -0.09
CDH4-201ENST00000543233 IPO4Q8TEX9 1081 aaKnown RBP14.46□□□□□ -0.09
CDH4-201ENST00000543233 BRD4O60885 1362 aaPredicted RBP14.46□□□□□ -0.09
CDH4-201ENST00000543233 ADGRL1O94910 1474 aa14.46□□□□□ -0.09
CDH4-201ENST00000543233 WDR7Q9Y4E6 1490 aa14.46□□□□□ -0.09
CDH4-201ENST00000543233 TRIM44Q96DX7 344 aaPredicted RBP14.46□□□□□ -0.1
CDH4-201ENST00000543233 POLR1AO95602 1720 aaPredicted RBP14.45□□□□□ -0.1
CDH4-201ENST00000543233 ASXL2Q76L83 1435 aa14.45□□□□□ -0.1
CDH4-201ENST00000543233 EXOC6Q8TAG9 804 aa14.45□□□□□ -0.1
CDH4-201ENST00000543233 ADGRF5Q8IZF2 1346 aa14.45□□□□□ -0.1
CDH4-201ENST00000543233 PLIN1O60240 522 aa14.45□□□□□ -0.1
CDH4-201ENST00000543233 RAPGEF3O95398 923 aa14.45□□□□□ -0.1
CDH4-201ENST00000543233 MS4A1P11836 297 aa14.45□□□□□ -0.1
CDH4-201ENST00000543233 XRCC6P12956 609 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDH4-201ENST00000543233 KIAA1211Q6ZU35 1233 aa14.45□□□□□ -0.1
CDH4-201ENST00000543233 SMG6Q86US8 1419 aaKnown RBP14.45□□□□□ -0.1
CDH4-201ENST00000543233 UNC13BO14795 1591 aa14.44□□□□□ -0.1
CDH4-201ENST00000543233 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
CDH4-201ENST00000543233 ESPNB1AK53 854 aa14.44□□□□□ -0.1
CDH4-201ENST00000543233 ANP32BQ92688 251 aaKnown RBP14.44□□□□□ -0.1
CDH4-201ENST00000543233 MAST1Q9Y2H9 1570 aa14.44□□□□□ -0.1
CDH4-201ENST00000543233 TNNT2P45379 298 aaPredicted RBP14.44□□□□□ -0.1
CDH4-201ENST00000543233 TRPM1Q7Z4N2 1603 aa14.43□□□□□ -0.1
CDH4-201ENST00000543233 NCLP19338 710 aaKnown RBP14.43□□□□□ -0.1
CDH4-201ENST00000543233 NCBP3Q53F19 620 aaKnown RBP14.43□□□□□ -0.1
CDH4-201ENST00000543233 GPRASP1Q5JY77 1395 aa14.43□□□□□ -0.1
CDH4-201ENST00000543233 UHRF1BP1LA0JNW5 1464 aa14.42□□□□□ -0.1
CDH4-201ENST00000543233 PLXNC1O60486 1568 aa14.42□□□□□ -0.1
CDH4-201ENST00000543233 SLKQ9H2G2 1235 aaPredicted RBP14.42□□□□□ -0.1
CDH4-201ENST00000543233 ADAMTS8Q9UP79 889 aa14.42□□□□□ -0.1
CDH4-201ENST00000543233 TRAK1Q9UPV9 953 aa14.42□□□□□ -0.1
CDH4-201ENST00000543233 IQGAP3Q86VI3 1631 aa14.42□□□□□ -0.1
CDH4-201ENST00000543233 UGGT1Q9NYU2 1555 aa14.42□□□□□ -0.1
CDH4-201ENST00000543233 TMEM132EQ6IEE7 984 aa14.42□□□□□ -0.1
CDH4-201ENST00000543233 PARD3Q8TEW0 1356 aa14.41□□□□□ -0.1
CDH4-201ENST00000543233 ATP10AO60312 1499 aa14.41□□□□□ -0.1
CDH4-201ENST00000543233 SAFB2Q14151 953 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDH4-201ENST00000543233 CCDC146Q8IYE0 955 aa14.41□□□□□ -0.1
CDH4-201ENST00000543233 RCAN3Q9UKA8 241 aa14.41□□□□□ -0.1
CDH4-201ENST00000543233 COL17A1Q9UMD9 1497 aaPredicted RBP14.41□□□□□ -0.1
CDH4-201ENST00000543233 FAM69CQ0P6D2 419 aa14.41□□□□□ -0.1
CDH4-201ENST00000543233 WDR43Q15061 677 aaKnown RBP eCLIP14.4□□□□□ -0.1
CDH4-201ENST00000543233 DHX37Q8IY37 1157 aaKnown RBP14.4□□□□□ -0.1
CDH4-201ENST00000543233 CFAP65Q6ZU64 1925 aaKnown RBP14.4□□□□□ -0.1
CDH4-201ENST00000543233 ZFYVE16Q7Z3T8 1539 aa14.39□□□□□ -0.11
CDH4-201ENST00000543233 LRPPRCP42704 1394 aaKnown RBP14.39□□□□□ -0.11
CDH4-201ENST00000543233 MAPK8IP2Q13387 824 aaPredicted RBP14.39□□□□□ -0.11
CDH4-201ENST00000543233 MYH16Q9H6N6 1097 aa14.38□□□□□ -0.11
CDH4-201ENST00000543233 PLPPR3Q6T4P5 718 aa14.38□□□□□ -0.11
CDH4-201ENST00000543233 SMAP1Q8IYB5 467 aaPredicted RBP14.38□□□□□ -0.11
CDH4-201ENST00000543233 ATP7AQ04656 1500 aa14.37□□□□□ -0.11
CDH4-201ENST00000543233 PPP2R1AP30153 589 aa14.37□□□□□ -0.11
CDH4-201ENST00000543233 CDK11BP21127 795 aaKnown RBP14.37□□□□□ -0.11
CDH4-201ENST00000543233 RRP1P56182 461 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms