RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 NPM1P06748 294 aaKnown RBP eCLIP19.67■□□□□ 0.74
VARS2-211ENST00000541562 MORC1Q86VD1 984 aa19.67■□□□□ 0.74
VARS2-211ENST00000541562 CABP2Q9NPB3 220 aa19.66■□□□□ 0.74
VARS2-211ENST00000541562 U2SURPO15042 1029 aaKnown RBP19.65■□□□□ 0.74
VARS2-211ENST00000541562 DAXXQ9UER7 740 aaPredicted RBP19.65■□□□□ 0.74
VARS2-211ENST00000541562 MAGI2Q86UL8 1455 aa19.65■□□□□ 0.74
VARS2-211ENST00000541562 RNF123Q5XPI4 1314 aa19.65■□□□□ 0.74
VARS2-211ENST00000541562 DUSP27Q5VZP5 1158 aa19.64■□□□□ 0.73
VARS2-211ENST00000541562 SPRYD3Q8NCJ5 442 aa19.64■□□□□ 0.73
VARS2-211ENST00000541562 CROCC2H7BZ55 1655 aa19.64■□□□□ 0.73
VARS2-211ENST00000541562 KDM5DQ9BY66 1539 aa19.64■□□□□ 0.73
VARS2-211ENST00000541562 WASHC2CQ9Y4E1 1318 aa19.62■□□□□ 0.73
VARS2-211ENST00000541562 CHD1O14646 1710 aa19.61■□□□□ 0.73
VARS2-211ENST00000541562 BACH2Q9BYV9 841 aa19.6■□□□□ 0.73
VARS2-211ENST00000541562 SHANK2Q9UPX8 1470 aa19.59■□□□□ 0.73
VARS2-211ENST00000541562 TCERG1O14776 1098 aaKnown RBP19.59■□□□□ 0.73
VARS2-211ENST00000541562 U2AF1L5P0DN76 240 aaPredicted RBP19.59■□□□□ 0.73
VARS2-211ENST00000541562 SRPK2P78362 688 aaKnown RBP19.59■□□□□ 0.73
VARS2-211ENST00000541562 U2AF1Q01081 240 aaKnown RBP eCLIP19.59■□□□□ 0.73
VARS2-211ENST00000541562 GGNBP2Q9H3C7 697 aa19.58■□□□□ 0.73
VARS2-211ENST00000541562 PDE3BQ13370 1112 aa19.58■□□□□ 0.72
VARS2-211ENST00000541562 MTHFSP49914 203 aa19.58■□□□□ 0.72
VARS2-211ENST00000541562 MINK1Q8N4C8 1332 aaPredicted RBP19.58■□□□□ 0.72
VARS2-211ENST00000541562 KANK1Q14678 1352 aa19.57■□□□□ 0.72
VARS2-211ENST00000541562 COL17A1Q9UMD9 1497 aaPredicted RBP19.57■□□□□ 0.72
VARS2-211ENST00000541562 NUTM2FA1L443 756 aa19.57■□□□□ 0.72
VARS2-211ENST00000541562 PLCH2O75038 1416 aa19.56■□□□□ 0.72
VARS2-211ENST00000541562 ADCY10Q96PN6 1610 aa19.56■□□□□ 0.72
VARS2-211ENST00000541562 TSR2Q969E8 191 aaKnown RBP19.56■□□□□ 0.72
VARS2-211ENST00000541562 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
VARS2-211ENST00000541562 PLEKHG5O94827 1062 aa19.55■□□□□ 0.72
VARS2-211ENST00000541562 IGHDP01880 384 aa19.55■□□□□ 0.72
VARS2-211ENST00000541562 CDCA8Q53HL2 280 aa19.55■□□□□ 0.72
VARS2-211ENST00000541562 SOX12O15370 315 aa19.54■□□□□ 0.72
VARS2-211ENST00000541562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.54■□□□□ 0.72
VARS2-211ENST00000541562 CYB5RLQ6IPT4 315 aa19.52■□□□□ 0.72
VARS2-211ENST00000541562 SLFN5Q08AF3 891 aa19.52■□□□□ 0.72
VARS2-211ENST00000541562 TCP11L2Q8N4U5 519 aa19.52■□□□□ 0.72
VARS2-211ENST00000541562 ELL2O00472 640 aaPredicted RBP19.51■□□□□ 0.71
VARS2-211ENST00000541562 CENPJQ9HC77 1338 aaPredicted RBP19.51■□□□□ 0.71
VARS2-211ENST00000541562 PREX2Q70Z35 1606 aa19.5■□□□□ 0.71
VARS2-211ENST00000541562 SLKQ9H2G2 1235 aaPredicted RBP19.5■□□□□ 0.71
VARS2-211ENST00000541562 TRPM1Q7Z4N2 1603 aa19.5■□□□□ 0.71
VARS2-211ENST00000541562 NOS1P29475 1434 aa19.49■□□□□ 0.71
VARS2-211ENST00000541562 FBXO31Q5XUX0 539 aaPredicted RBP19.49■□□□□ 0.71
VARS2-211ENST00000541562 FANCAO15360 1455 aa19.49■□□□□ 0.71
VARS2-211ENST00000541562 IL27Q8NEV9 243 aa19.48■□□□□ 0.71
VARS2-211ENST00000541562 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.48■□□□□ 0.71
VARS2-211ENST00000541562 WDR7Q9Y4E6 1490 aa19.48■□□□□ 0.71
VARS2-211ENST00000541562 ABCC2Q92887 1545 aa19.47■□□□□ 0.71
VARS2-211ENST00000541562 POGKQ9P215 609 aa19.47■□□□□ 0.71
VARS2-211ENST00000541562 SEC24BO95487 1268 aa19.47■□□□□ 0.71
VARS2-211ENST00000541562 WWC1Q8IX03 1113 aa19.47■□□□□ 0.71
VARS2-211ENST00000541562 ARHGEF5Q12774 1597 aa19.46■□□□□ 0.71
VARS2-211ENST00000541562 GPRASP1Q5JY77 1395 aa19.46■□□□□ 0.71
VARS2-211ENST00000541562 ATP10AO60312 1499 aa19.46■□□□□ 0.71
VARS2-211ENST00000541562 ADGRL1O94910 1474 aa19.46■□□□□ 0.71
VARS2-211ENST00000541562 RLBP1P12271 317 aa19.45■□□□□ 0.7
VARS2-211ENST00000541562 POLR1AO95602 1720 aaPredicted RBP19.45■□□□□ 0.7
VARS2-211ENST00000541562 NSD3Q9BZ95 1437 aa19.45■□□□□ 0.7
VARS2-211ENST00000541562 DUOX2Q9NRD8 1548 aa19.45■□□□□ 0.7
VARS2-211ENST00000541562 THUMPD2Q9BTF0 503 aaKnown RBP19.43■□□□□ 0.7
VARS2-211ENST00000541562 SCAF11Q99590 1463 aaKnown RBP19.41■□□□□ 0.7
VARS2-211ENST00000541562 HMOX1P09601 288 aa19.41■□□□□ 0.7
VARS2-211ENST00000541562 IDI1Q13907 227 aa19.41■□□□□ 0.7
VARS2-211ENST00000541562 MYO5CQ9NQX4 1742 aa19.4■□□□□ 0.7
VARS2-211ENST00000541562 EIF3AQ14152 1382 aaKnown RBP19.39■□□□□ 0.69
VARS2-211ENST00000541562 WAPLQ7Z5K2 1190 aa19.39■□□□□ 0.69
VARS2-211ENST00000541562 CENPQQ7L2Z9 268 aaPredicted RBP19.39■□□□□ 0.69
VARS2-211ENST00000541562 NCKAP5LQ9HCH0 1330 aa19.39■□□□□ 0.69
VARS2-211ENST00000541562 MAST1Q9Y2H9 1570 aa19.38■□□□□ 0.69
VARS2-211ENST00000541562 ZCCHC11Q5TAX3 1644 aaKnown RBP19.38■□□□□ 0.69
VARS2-211ENST00000541562 E9PSI1 815 aa19.38■□□□□ 0.69
VARS2-211ENST00000541562 PRAM1Q96QH2 718 aa19.38■□□□□ 0.69
VARS2-211ENST00000541562 ASXL2Q76L83 1435 aa19.38■□□□□ 0.69
VARS2-211ENST00000541562 PRDM15P57071 1507 aaPredicted RBP19.38■□□□□ 0.69
VARS2-211ENST00000541562 FTSJ3Q8IY81 847 aaKnown RBP19.37■□□□□ 0.69
VARS2-211ENST00000541562 PCDHB15Q9Y5E8 787 aa19.37■□□□□ 0.69
VARS2-211ENST00000541562 FRAT2O75474 233 aaPredicted RBP19.36■□□□□ 0.69
VARS2-211ENST00000541562 C8orf34Q49A92 452 aa19.36■□□□□ 0.69
VARS2-211ENST00000541562 FAM161AQ3B820 660 aa19.36■□□□□ 0.69
VARS2-211ENST00000541562 BLMP54132 1417 aaPredicted RBP19.36■□□□□ 0.69
VARS2-211ENST00000541562 ITPRIPQ8IWB1 547 aa19.34■□□□□ 0.69
VARS2-211ENST00000541562 ZRANB1Q9UGI0 708 aa19.34■□□□□ 0.69
VARS2-211ENST00000541562 SMC4Q9NTJ3 1288 aa19.34■□□□□ 0.69
VARS2-211ENST00000541562 EXOSC9Q06265 439 aaKnown RBP19.34■□□□□ 0.69
VARS2-211ENST00000541562 OSCARQ8IYS5 282 aa19.34■□□□□ 0.69
VARS2-211ENST00000541562 CFAP53Q96M91 514 aa19.34■□□□□ 0.69
VARS2-211ENST00000541562 CLTCL1P53675 1640 aa19.34■□□□□ 0.69
VARS2-211ENST00000541562 E9PCH4 1651 aa19.33■□□□□ 0.69
VARS2-211ENST00000541562 NFKBIBQ15653 356 aa19.33■□□□□ 0.68
VARS2-211ENST00000541562 C1orf115Q9H7X2 142 aa19.33■□□□□ 0.68
VARS2-211ENST00000541562 CABP1Q9NZU7 370 aa19.32■□□□□ 0.68
VARS2-211ENST00000541562 BRPF3Q9ULD4 1205 aa19.32■□□□□ 0.68
VARS2-211ENST00000541562 ZNF521Q96K83 1311 aa19.32■□□□□ 0.68
VARS2-211ENST00000541562 ASXL1Q8IXJ9 1541 aa19.32■□□□□ 0.68
VARS2-211ENST00000541562 RUNDC1Q96C34 613 aa19.32■□□□□ 0.68
VARS2-211ENST00000541562 KDM2BQ8NHM5 1336 aa19.31■□□□□ 0.68
VARS2-211ENST00000541562 ABCC1P33527 1531 aa19.31■□□□□ 0.68
VARS2-211ENST00000541562 SLC24A1O60721 1099 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms