RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 IFT172Q9UG01 1749 aa28.19■■■□□ 2.1
LSM14A-202ENST00000540746 MYOM2P54296 1465 aa28.19■■■□□ 2.1
LSM14A-202ENST00000540746 ABCA6Q8N139 1617 aa28.19■■■□□ 2.1
LSM14A-202ENST00000540746 RBM19Q9Y4C8 960 aaKnown RBP28.18■■■□□ 2.1
LSM14A-202ENST00000540746 ADGRF5Q8IZF2 1346 aa28.18■■■□□ 2.1
LSM14A-202ENST00000540746 HECW2Q9P2P5 1572 aa28.16■■■□□ 2.1
LSM14A-202ENST00000540746 CFAP70Q5T0N1 1121 aa28.16■■■□□ 2.1
LSM14A-202ENST00000540746 B4GALNT3Q6L9W6 998 aa28.15■■■□□ 2.1
LSM14A-202ENST00000540746 CFAP65Q6ZU64 1925 aaKnown RBP28.15■■■□□ 2.1
LSM14A-202ENST00000540746 SYNMO15061 1565 aa28.14■■■□□ 2.09
LSM14A-202ENST00000540746 MYOM1P52179 1685 aa28.13■■■□□ 2.09
LSM14A-202ENST00000540746 NPATQ14207 1427 aa28.12■■■□□ 2.09
LSM14A-202ENST00000540746 EIF3AQ14152 1382 aaKnown RBP28.11■■■□□ 2.09
LSM14A-202ENST00000540746 CDCA8Q53HL2 280 aa28.1■■■□□ 2.09
LSM14A-202ENST00000540746 NRXN1Q9ULB1 1477 aa28.1■■■□□ 2.09
LSM14A-202ENST00000540746 ADGRB3O60242 1522 aa28.1■■■□□ 2.09
LSM14A-202ENST00000540746 GGT6Q6P531 493 aa28.1■■■□□ 2.09
LSM14A-202ENST00000540746 AMER1Q5JTC6 1135 aaPredicted RBP28.09■■■□□ 2.09
LSM14A-202ENST00000540746 SALL2Q9Y467 1007 aaPredicted RBP28.09■■■□□ 2.09
LSM14A-202ENST00000540746 KNSTRNQ9Y448 316 aa28.07■■■□□ 2.08
LSM14A-202ENST00000540746 BLMP54132 1417 aaPredicted RBP28.07■■■□□ 2.08
LSM14A-202ENST00000540746 RAPGEF3O95398 923 aa28.06■■■□□ 2.08
LSM14A-202ENST00000540746 NEO1Q92859 1461 aa28.05■■■□□ 2.08
LSM14A-202ENST00000540746 KDM5AP29375 1690 aaKnown RBP28.05■■■□□ 2.08
LSM14A-202ENST00000540746 ZMYM4Q5VZL5 1548 aa28.05■■■□□ 2.08
LSM14A-202ENST00000540746 NOS1P29475 1434 aa28.05■■■□□ 2.08
LSM14A-202ENST00000540746 INSRP06213 1382 aa28.04■■■□□ 2.08
LSM14A-202ENST00000540746 ABCC3O15438 1527 aa28.03■■■□□ 2.08
LSM14A-202ENST00000540746 ERVK-7P63135 1459 aa28.03■■■□□ 2.08
LSM14A-202ENST00000540746 PPP2R1AP30153 589 aa28.01■■■□□ 2.08
LSM14A-202ENST00000540746 ASXL1Q8IXJ9 1541 aa28.01■■■□□ 2.08
LSM14A-202ENST00000540746 PPLO60437 1756 aa28.01■■■□□ 2.07
LSM14A-202ENST00000540746 CHGAP10645 457 aaKnown RBP28.01■■■□□ 2.07
LSM14A-202ENST00000540746 SIGLEC1Q9BZZ2 1709 aa27.99■■■□□ 2.07
LSM14A-202ENST00000540746 PDE3BQ13370 1112 aa27.99■■■□□ 2.07
LSM14A-202ENST00000540746 MYO3AQ8NEV4 1616 aa27.98■■■□□ 2.07
LSM14A-202ENST00000540746 DIP2CQ9Y2E4 1556 aa27.98■■■□□ 2.07
LSM14A-202ENST00000540746 CAMSAP1Q5T5Y3 1602 aa27.97■■■□□ 2.07
LSM14A-202ENST00000540746 CDCA7LQ96GN5 454 aa27.97■■■□□ 2.07
LSM14A-202ENST00000540746 SETBP1Q9Y6X0 1596 aa27.96■■■□□ 2.07
LSM14A-202ENST00000540746 ADAMTS8Q9UP79 889 aa27.96■■■□□ 2.07
LSM14A-202ENST00000540746 PIK3C2GO75747 1445 aa27.96■■■□□ 2.07
LSM14A-202ENST00000540746 RICTORQ6R327 1708 aa27.96■■■□□ 2.07
LSM14A-202ENST00000540746 NPC1L1Q9UHC9 1359 aa27.95■■■□□ 2.06
LSM14A-202ENST00000540746 RCAN3Q9UKA8 241 aa27.93■■■□□ 2.06
LSM14A-202ENST00000540746 SBNO2Q9Y2G9 1366 aa27.92■■■□□ 2.06
LSM14A-202ENST00000540746 SLC24A1O60721 1099 aa27.92■■■□□ 2.06
LSM14A-202ENST00000540746 RRP1P56182 461 aaKnown RBP27.92■■■□□ 2.06
LSM14A-202ENST00000540746 C14orf93Q9H972 538 aaKnown RBP27.91■■■□□ 2.06
LSM14A-202ENST00000540746 ADGRB1O14514 1584 aa27.9■■■□□ 2.06
LSM14A-202ENST00000540746 PIK3C2BO00750 1634 aa27.9■■■□□ 2.06
LSM14A-202ENST00000540746 CARD14Q9BXL6 1004 aa27.89■■■□□ 2.06
LSM14A-202ENST00000540746 CENPJQ9HC77 1338 aaPredicted RBP27.88■■■□□ 2.05
LSM14A-202ENST00000540746 CCDC136Q96JN2 1154 aa27.87■■■□□ 2.05
LSM14A-202ENST00000540746 YEATS2Q9ULM3 1422 aa27.87■■■□□ 2.05
LSM14A-202ENST00000540746 TRAK1Q9UPV9 953 aa27.86■■■□□ 2.05
LSM14A-202ENST00000540746 ZC3H13Q5T200 1668 aaKnown RBP27.86■■■□□ 2.05
LSM14A-202ENST00000540746 RPGRIP1LQ68CZ1 1315 aa27.86■■■□□ 2.05
LSM14A-202ENST00000540746 TMEM132EQ6IEE7 984 aa27.85■■■□□ 2.05
LSM14A-202ENST00000540746 QRICH2Q9H0J4 1663 aa27.84■■■□□ 2.05
LSM14A-202ENST00000540746 WDR43Q15061 677 aaKnown RBP eCLIP27.83■■■□□ 2.05
LSM14A-202ENST00000540746 CYB5RLQ6IPT4 315 aa27.83■■■□□ 2.05
LSM14A-202ENST00000540746 ARHGAP31Q2M1Z3 1444 aa27.81■■■□□ 2.04
LSM14A-202ENST00000540746 NEXMIFQ5QGS0 1516 aa27.8■■■□□ 2.04
LSM14A-202ENST00000540746 PLEKHH1Q9ULM0 1364 aa27.8■■■□□ 2.04
LSM14A-202ENST00000540746 NUTM2DQ5VT03 806 aaPredicted RBP27.8■■■□□ 2.04
LSM14A-202ENST00000540746 EXOC6Q8TAG9 804 aa27.79■■■□□ 2.04
LSM14A-202ENST00000540746 GLI2P10070 1586 aa27.79■■■□□ 2.04
LSM14A-202ENST00000540746 FANCIQ9NVI1 1328 aa27.76■■■□□ 2.04
LSM14A-202ENST00000540746 IDI1Q13907 227 aa27.76■■■□□ 2.03
LSM14A-202ENST00000540746 ZNF521Q96K83 1311 aa27.75■■■□□ 2.03
LSM14A-202ENST00000540746 MSH5O43196 834 aa27.73■■■□□ 2.03
LSM14A-202ENST00000540746 VGFO15240 615 aaPredicted RBP27.73■■■□□ 2.03
LSM14A-202ENST00000540746 MYO5BQ9ULV0 1848 aa27.72■■■□□ 2.03
LSM14A-202ENST00000540746 SLC12A5Q9H2X9 1139 aa27.72■■■□□ 2.03
LSM14A-202ENST00000540746 ARHGEF28Q8N1W1 1705 aaKnown RBP27.72■■■□□ 2.03
LSM14A-202ENST00000540746 ANP32EQ9BTT0 268 aa27.72■■■□□ 2.03
LSM14A-202ENST00000540746 PLIN1O60240 522 aa27.71■■■□□ 2.03
LSM14A-202ENST00000540746 NSD3Q9BZ95 1437 aa27.7■■■□□ 2.02
LSM14A-202ENST00000540746 CCDC146Q8IYE0 955 aa27.69■■■□□ 2.02
LSM14A-202ENST00000540746 PREX1Q8TCU6 1659 aa27.69■■■□□ 2.02
LSM14A-202ENST00000540746 DUSP27Q5VZP5 1158 aa27.69■■■□□ 2.02
LSM14A-202ENST00000540746 RIMBP3CA6NJZ7 1639 aa27.68■■■□□ 2.02
LSM14A-202ENST00000540746 RIMBP3BA6NNM3 1639 aa27.68■■■□□ 2.02
LSM14A-202ENST00000540746 RIMBP3Q9UFD9 1639 aa27.68■■■□□ 2.02
LSM14A-202ENST00000540746 MYT1Q01538 1121 aa27.68■■■□□ 2.02
LSM14A-202ENST00000540746 SLC52A1Q9NWF4 448 aa27.67■■■□□ 2.02
LSM14A-202ENST00000540746 FAM69CQ0P6D2 419 aa27.66■■■□□ 2.02
LSM14A-202ENST00000540746 TULP4Q9NRJ4 1543 aa27.66■■■□□ 2.02
LSM14A-202ENST00000540746 DIP2BQ9P265 1576 aa27.66■■■□□ 2.02
LSM14A-202ENST00000540746 TMEM131LA2VDJ0 1609 aa27.65■■■□□ 2.02
LSM14A-202ENST00000540746 ZFYVE9O95405 1425 aa27.65■■■□□ 2.02
LSM14A-202ENST00000540746 GOLGA2Q08379 1002 aa27.63■■■□□ 2.01
LSM14A-202ENST00000540746 TSPOAP1O95153 1857 aa27.62■■■□□ 2.01
LSM14A-202ENST00000540746 APAF1O14727 1248 aa27.62■■■□□ 2.01
LSM14A-202ENST00000540746 POLR3AO14802 1390 aaPredicted RBP27.61■■■□□ 2.01
LSM14A-202ENST00000540746 FBXO31Q5XUX0 539 aaPredicted RBP27.6■■■□□ 2.01
LSM14A-202ENST00000540746 SENP3Q9H4L4 574 aaPredicted RBP27.6■■■□□ 2.01
LSM14A-202ENST00000540746 USP32Q8NFA0 1604 aa27.6■■■□□ 2.01
LSM14A-202ENST00000540746 SLFN5Q08AF3 891 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms