RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 PTPN23Q9H3S7 1636 aa9.73□□□□□ -0.85
SNHG1-212ENST00000539975 ANKRD30AQ9BXX3 1397 aa9.73□□□□□ -0.85
SNHG1-212ENST00000539975 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.73□□□□□ -0.857e-33■□□□□ 8.4
SNHG1-212ENST00000539975 TCOF1Q13428 1488 aaKnown RBP9.72□□□□□ -0.85
SNHG1-212ENST00000539975 ZMYM4Q5VZL5 1548 aa9.72□□□□□ -0.85
SNHG1-212ENST00000539975 POTEFA5A3E0 1075 aa9.72□□□□□ -0.85
SNHG1-212ENST00000539975 MLECQ14165 292 aa9.72□□□□□ -0.85
SNHG1-212ENST00000539975 RRP7BPQ9NSQ0 103 aa9.72□□□□□ -0.85
SNHG1-212ENST00000539975 COLQQ9Y215 455 aaPredicted RBP9.72□□□□□ -0.85
SNHG1-212ENST00000539975 C9orf84Q5VXU9 1444 aa9.72□□□□□ -0.85
SNHG1-212ENST00000539975 HECW2Q9P2P5 1572 aa9.71□□□□□ -0.85
SNHG1-212ENST00000539975 DAPK1P53355 1430 aa9.71□□□□□ -0.86
SNHG1-212ENST00000539975 YEATS2Q9ULM3 1422 aa9.71□□□□□ -0.86
SNHG1-212ENST00000539975 KDM5CP41229 1560 aa9.71□□□□□ -0.86
SNHG1-212ENST00000539975 ARHGEF5Q12774 1597 aa9.71□□□□□ -0.86
SNHG1-212ENST00000539975 ABCC5O15440 1437 aa9.7□□□□□ -0.86
SNHG1-212ENST00000539975 ATP7AQ04656 1500 aa9.7□□□□□ -0.86
SNHG1-212ENST00000539975 RICTORQ6R327 1708 aa9.7□□□□□ -0.86
SNHG1-212ENST00000539975 KIF3BO15066 747 aa9.69□□□□□ -0.86
SNHG1-212ENST00000539975 FRMPD1Q5SYB0 1578 aa9.69□□□□□ -0.86
SNHG1-212ENST00000539975 GGT6Q6P531 493 aa9.69□□□□□ -0.86
SNHG1-212ENST00000539975 DHX29Q7Z478 1369 aaKnown RBP9.69□□□□□ -0.86
SNHG1-212ENST00000539975 RRBP1Q9P2E9 1410 aaKnown RBP9.69□□□□□ -0.86
SNHG1-212ENST00000539975 ARHGEF40Q8TER5 1519 aa9.68□□□□□ -0.86
SNHG1-212ENST00000539975 A2MP01023 1474 aa9.68□□□□□ -0.86
SNHG1-212ENST00000539975 NLRP6P59044 892 aa9.68□□□□□ -0.86
SNHG1-212ENST00000539975 MAMSTRQ6ZN01 415 aa9.68□□□□□ -0.86
SNHG1-212ENST00000539975 PDCD7Q8N8D1 485 aaKnown RBP9.68□□□□□ -0.86
SNHG1-212ENST00000539975 SHANK2Q9UPX8 1470 aa9.67□□□□□ -0.86
SNHG1-212ENST00000539975 KIF15Q9NS87 1388 aa9.67□□□□□ -0.86
SNHG1-212ENST00000539975 L3MBTL3Q96JM7 780 aaPredicted RBP9.67□□□□□ -0.86
SNHG1-212ENST00000539975 KANK1Q14678 1352 aa9.65□□□□□ -0.86
SNHG1-212ENST00000539975 WASHC2CQ9Y4E1 1318 aa9.65□□□□□ -0.86
SNHG1-212ENST00000539975 DNMT1P26358 1616 aaKnown RBP9.65□□□□□ -0.86
SNHG1-212ENST00000539975 POTEB2H3BUK9 544 aa9.65□□□□□ -0.86
SNHG1-212ENST00000539975 NCOA1Q15788 1441 aa9.65□□□□□ -0.87
SNHG1-212ENST00000539975 ROCK1Q13464 1354 aa9.64□□□□□ -0.87
SNHG1-212ENST00000539975 ACIN1Q9UKV3 1341 aaKnown RBP9.64□□□□□ -0.87
SNHG1-212ENST00000539975 INO80Q9ULG1 1556 aaPredicted RBP9.64□□□□□ -0.87
SNHG1-212ENST00000539975 DIP2CQ9Y2E4 1556 aa9.64□□□□□ -0.87
SNHG1-212ENST00000539975 RYDENQ9NUL5 291 aaKnown RBP9.64□□□□□ -0.87
SNHG1-212ENST00000539975 DUOX2Q9NRD8 1548 aa9.64□□□□□ -0.87
SNHG1-212ENST00000539975 MAST1Q9Y2H9 1570 aa9.63□□□□□ -0.87
SNHG1-212ENST00000539975 MFRPQ9BY79 579 aa9.63□□□□□ -0.87
SNHG1-212ENST00000539975 PHF8Q9UPP1 1060 aa9.63□□□□□ -0.87
SNHG1-212ENST00000539975 KIDINS220Q9ULH0 1771 aa9.63□□□□□ -0.87
SNHG1-212ENST00000539975 REREQ9P2R6 1566 aa9.63□□□□□ -0.87
SNHG1-212ENST00000539975 AGLP35573 1532 aa9.62□□□□□ -0.87
SNHG1-212ENST00000539975 FBXO22Q8NEZ5 403 aa9.62□□□□□ -0.87
SNHG1-212ENST00000539975 ABCA6Q8N139 1617 aa9.62□□□□□ -0.87
SNHG1-212ENST00000539975 ERBINQ96RT1 1412 aa9.62□□□□□ -0.87
SNHG1-212ENST00000539975 ANKRD50Q9ULJ7 1429 aa9.62□□□□□ -0.87
SNHG1-212ENST00000539975 ADGBQ8N7X0 1667 aa9.61□□□□□ -0.87
SNHG1-212ENST00000539975 ADGRL2O95490 1459 aa9.61□□□□□ -0.87
SNHG1-212ENST00000539975 KDM4FA0A1W2PPD8 638 aa9.61□□□□□ -0.87
SNHG1-212ENST00000539975 TRIM26Q12899 539 aaPredicted RBP9.61□□□□□ -0.87
SNHG1-212ENST00000539975 TRIM52Q96A61 297 aa9.61□□□□□ -0.87
SNHG1-212ENST00000539975 SCUBE2Q9NQ36 999 aa9.61□□□□□ -0.87
SNHG1-212ENST00000539975 CNTLNQ9NXG0 1405 aa9.61□□□□□ -0.87
SNHG1-212ENST00000539975 PLXNC1O60486 1568 aa9.6□□□□□ -0.87
SNHG1-212ENST00000539975 G3V3G9 751 aa9.6□□□□□ -0.87
SNHG1-212ENST00000539975 PTPRKQ15262 1439 aa9.59□□□□□ -0.87
SNHG1-212ENST00000539975 POTEJP0CG39 1038 aa9.59□□□□□ -0.87
SNHG1-212ENST00000539975 MS4A4AQ96JQ5 239 aa9.59□□□□□ -0.87
SNHG1-212ENST00000539975 DPY19L2Q6NUT2 758 aa9.58□□□□□ -0.88
SNHG1-212ENST00000539975 BBXQ8WY36 941 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-212ENST00000539975 BOLA1Q9Y3E2 137 aa9.58□□□□□ -0.88
SNHG1-212ENST00000539975 CROCC2H7BZ55 1655 aa9.58□□□□□ -0.88
SNHG1-212ENST00000539975 NUP155O75694 1391 aa9.56□□□□□ -0.88
SNHG1-212ENST00000539975 ZMYM3Q14202 1370 aa9.56□□□□□ -0.88
SNHG1-212ENST00000539975 NKX1-1Q15270 411 aaPredicted RBP9.56□□□□□ -0.88
SNHG1-212ENST00000539975 OTUD5Q96G74 571 aa9.56□□□□□ -0.88
SNHG1-212ENST00000539975 BCORL1Q5H9F3 1711 aa9.56□□□□□ -0.88
SNHG1-212ENST00000539975 HFM1A2PYH4 1435 aa9.56□□□□□ -0.88
SNHG1-212ENST00000539975 CEBPAP49715 358 aaPredicted RBP9.55□□□□□ -0.88
SNHG1-212ENST00000539975 TMEM121BQ9BXQ6 578 aaPredicted RBP9.55□□□□□ -0.88
SNHG1-212ENST00000539975 EIF2AK4Q9P2K8 1649 aaKnown RBP9.55□□□□□ -0.88
SNHG1-212ENST00000539975 SETD5Q9C0A6 1442 aa9.55□□□□□ -0.88
SNHG1-212ENST00000539975 PTPRMP28827 1452 aa9.54□□□□□ -0.88
SNHG1-212ENST00000539975 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.54□□□□□ -0.88
SNHG1-212ENST00000539975 NAIPQ13075 1403 aa9.54□□□□□ -0.88
SNHG1-212ENST00000539975 KDM5DQ9BY66 1539 aa9.53□□□□□ -0.88
SNHG1-212ENST00000539975 FAM135AQ9P2D6 1515 aa9.53□□□□□ -0.88
SNHG1-212ENST00000539975 C3orf67Q6ZVT6 689 aa9.53□□□□□ -0.88
SNHG1-212ENST00000539975 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-212ENST00000539975 MADDQ8WXG6 1647 aa9.52□□□□□ -0.89
SNHG1-212ENST00000539975 ADAMTSL3P82987 1691 aa9.51□□□□□ -0.89
SNHG1-212ENST00000539975 HRCP23327 699 aa9.51□□□□□ -0.89
SNHG1-212ENST00000539975 MICALL2Q8IY33 904 aa9.51□□□□□ -0.89
SNHG1-212ENST00000539975 GTPBP6O43824 516 aaPredicted RBP9.5□□□□□ -0.89
SNHG1-212ENST00000539975 FER1L4A9Z1Z3 1794 aa9.5□□□□□ -0.89
SNHG1-212ENST00000539975 NPATQ14207 1427 aa9.49□□□□□ -0.89
SNHG1-212ENST00000539975 RIMS1Q86UR5 1692 aaKnown RBP9.49□□□□□ -0.89
SNHG1-212ENST00000539975 FBXO31Q5XUX0 539 aaPredicted RBP9.49□□□□□ -0.89
SNHG1-212ENST00000539975 RNF17Q9BXT8 1623 aaKnown RBP9.49□□□□□ -0.89
SNHG1-212ENST00000539975 RAB3GAP2Q9H2M9 1393 aa9.49□□□□□ -0.89
SNHG1-212ENST00000539975 SIGLEC1Q9BZZ2 1709 aa9.48□□□□□ -0.89
SNHG1-212ENST00000539975 ABCC3O15438 1527 aa9.48□□□□□ -0.89
SNHG1-212ENST00000539975 PRDM15P57071 1507 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-212ENST00000539975 PCGF6Q9BYE7 350 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms