RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 CADPS2Q86UW7 1296 aa19.12■□□□□ 0.65
YBX3-207ENST00000539204 NUTM2AQ8IVF1 878 aaPredicted RBP19.12■□□□□ 0.65
YBX3-207ENST00000539204 COL16A1Q07092 1604 aaPredicted RBP19.11■□□□□ 0.65
YBX3-207ENST00000539204 KIF15Q9NS87 1388 aa19.11■□□□□ 0.65
YBX3-207ENST00000539204 ATF3P18847 181 aa19.11■□□□□ 0.65
YBX3-207ENST00000539204 C19orf44Q9H6X5 657 aa19.11■□□□□ 0.65
YBX3-207ENST00000539204 MYOM3Q5VTT5 1437 aa19.1■□□□□ 0.65
YBX3-207ENST00000539204 NWD1Q149M9 1564 aa19.1■□□□□ 0.65
YBX3-207ENST00000539204 CDK12Q9NYV4 1490 aaPredicted RBP19.09■□□□□ 0.65
YBX3-207ENST00000539204 NCOA3Q9Y6Q9 1424 aa19.09■□□□□ 0.65
YBX3-207ENST00000539204 KDM5AP29375 1690 aaKnown RBP19.09■□□□□ 0.65
YBX3-207ENST00000539204 PPP1R15AO75807 674 aaPredicted RBP19.09■□□□□ 0.65
YBX3-207ENST00000539204 ERBINQ96RT1 1412 aa19.08■□□□□ 0.65
YBX3-207ENST00000539204 TBX22Q9Y458 520 aa19.08■□□□□ 0.64
YBX3-207ENST00000539204 AFF2P51816 1311 aa19.07■□□□□ 0.64
YBX3-207ENST00000539204 QTRT2Q9H974 415 aaKnown RBP19.06■□□□□ 0.64
YBX3-207ENST00000539204 PLEKHG1Q9ULL1 1385 aa19.05■□□□□ 0.64
YBX3-207ENST00000539204 RBM6P78332 1123 aaKnown RBP19.04■□□□□ 0.64
YBX3-207ENST00000539204 FOXD1Q16676 465 aa19.04■□□□□ 0.64
YBX3-207ENST00000539204 NUTM2DQ5VT03 806 aaPredicted RBP19.04■□□□□ 0.64
YBX3-207ENST00000539204 NOS1P29475 1434 aa19.02■□□□□ 0.64
YBX3-207ENST00000539204 KANK4Q5T7N3 995 aaPredicted RBP19.02■□□□□ 0.64
YBX3-207ENST00000539204 BRINP3Q76B58 766 aa19.02■□□□□ 0.64
YBX3-207ENST00000539204 CHD2O14647 1828 aaKnown RBP19.02■□□□□ 0.63
YBX3-207ENST00000539204 AHDC1Q5TGY3 1603 aaPredicted RBP19.01■□□□□ 0.63
YBX3-207ENST00000539204 SHPRHQ149N8 1683 aa19.01■□□□□ 0.63
YBX3-207ENST00000539204 ADGRB3O60242 1522 aa19■□□□□ 0.63
YBX3-207ENST00000539204 LMTK2Q8IWU2 1503 aa19■□□□□ 0.63
YBX3-207ENST00000539204 ABCF1Q8NE71 845 aaKnown RBP eCLIP19■□□□□ 0.63
YBX3-207ENST00000539204 LRRC59Q96AG4 307 aaKnown RBP19■□□□□ 0.63
YBX3-207ENST00000539204 C8orf37Q96NL8 207 aa19■□□□□ 0.63
YBX3-207ENST00000539204 ZRANB1Q9UGI0 708 aa18.99■□□□□ 0.63
YBX3-207ENST00000539204 ABCC5O15440 1437 aa18.99■□□□□ 0.63
YBX3-207ENST00000539204 NGLY1Q96IV0 654 aa18.98■□□□□ 0.63
YBX3-207ENST00000539204 ZFYVE9O95405 1425 aa18.98■□□□□ 0.63
YBX3-207ENST00000539204 RIMS2Q9UQ26 1411 aa18.98■□□□□ 0.63
YBX3-207ENST00000539204 CHIC2Q9UKJ5 165 aa18.97■□□□□ 0.63
YBX3-207ENST00000539204 RGS12O14924 1447 aa18.95■□□□□ 0.62
YBX3-207ENST00000539204 CHGAP10645 457 aaKnown RBP18.95■□□□□ 0.62
YBX3-207ENST00000539204 AMOTL2Q9Y2J4 779 aa18.95■□□□□ 0.62
YBX3-207ENST00000539204 ANKRD30AQ9BXX3 1397 aa18.94■□□□□ 0.62
YBX3-207ENST00000539204 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.94■□□□□ 0.62
YBX3-207ENST00000539204 PIK3R4Q99570 1358 aa18.93■□□□□ 0.62
YBX3-207ENST00000539204 SETD5Q9C0A6 1442 aa18.93■□□□□ 0.62
YBX3-207ENST00000539204 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
YBX3-207ENST00000539204 DIP2AQ14689 1571 aa18.92■□□□□ 0.62
YBX3-207ENST00000539204 DAPK1P53355 1430 aa18.91■□□□□ 0.62
YBX3-207ENST00000539204 ADAMTS13Q76LX8 1427 aa18.9■□□□□ 0.62
YBX3-207ENST00000539204 ADAMTS2O95450 1211 aa18.89■□□□□ 0.61
YBX3-207ENST00000539204 RPRD2Q5VT52 1461 aaKnown RBP18.88■□□□□ 0.61
YBX3-207ENST00000539204 CCDC125Q86Z20 511 aa18.87■□□□□ 0.61
YBX3-207ENST00000539204 VPS8Q8N3P4 1428 aa18.87■□□□□ 0.61
YBX3-207ENST00000539204 DDX17Q92841 729 aaKnown RBP18.86■□□□□ 0.61
YBX3-207ENST00000539204 USP21Q9UK80 565 aa18.86■□□□□ 0.61
YBX3-207ENST00000539204 TRPC5Q9UL62 973 aaPredicted RBP18.86■□□□□ 0.61
YBX3-207ENST00000539204 ASXL1Q8IXJ9 1541 aa18.85■□□□□ 0.61
YBX3-207ENST00000539204 DCCP43146 1447 aa18.85■□□□□ 0.61
YBX3-207ENST00000539204 CROCC2H7BZ55 1655 aa18.85■□□□□ 0.61
YBX3-207ENST00000539204 PNPLA6Q8IY17 1366 aa18.84■□□□□ 0.61
YBX3-207ENST00000539204 TMEM131LA2VDJ0 1609 aa18.84■□□□□ 0.61
YBX3-207ENST00000539204 MYO5BQ9ULV0 1848 aa18.83■□□□□ 0.6
YBX3-207ENST00000539204 PTPRUQ92729 1446 aa18.83■□□□□ 0.6
YBX3-207ENST00000539204 PTPN23Q9H3S7 1636 aa18.82■□□□□ 0.6
YBX3-207ENST00000539204 MST1RQ04912 1400 aa18.82■□□□□ 0.6
YBX3-207ENST00000539204 APLP2Q06481 763 aa18.81■□□□□ 0.6
YBX3-207ENST00000539204 GCC2Q8IWJ2 1684 aa18.81■□□□□ 0.6
YBX3-207ENST00000539204 FNBP4Q8N3X1 1017 aaPredicted RBP18.8■□□□□ 0.6
YBX3-207ENST00000539204 TRPM2O94759 1503 aa18.79■□□□□ 0.6
YBX3-207ENST00000539204 SETBP1Q9Y6X0 1596 aa18.78■□□□□ 0.6
YBX3-207ENST00000539204 NHSL1Q5SYE7 1610 aa18.77■□□□□ 0.6
YBX3-207ENST00000539204 ANKRD50Q9ULJ7 1429 aa18.76■□□□□ 0.59
YBX3-207ENST00000539204 EP400Q96L91 3159 aa18.73■□□□□ 0.59
YBX3-207ENST00000539204 SOS2Q07890 1332 aaPredicted RBP18.73■□□□□ 0.59
YBX3-207ENST00000539204 ATRNO75882 1429 aa18.71■□□□□ 0.59
YBX3-207ENST00000539204 PTCH1Q13635 1447 aa18.71■□□□□ 0.59
YBX3-207ENST00000539204 ADGRL2O95490 1459 aa18.71■□□□□ 0.59
YBX3-207ENST00000539204 FAM50AQ14320 339 aaKnown RBP18.7■□□□□ 0.58
YBX3-207ENST00000539204 ORAI2Q96SN7 254 aa18.7■□□□□ 0.58
YBX3-207ENST00000539204 METP08581 1390 aa18.69■□□□□ 0.58
YBX3-207ENST00000539204 ADGRL3Q9HAR2 1447 aa18.69■□□□□ 0.58
YBX3-207ENST00000539204 LOC105371045A0A1W2PR82 267 aa18.69■□□□□ 0.58
YBX3-207ENST00000539204 ZNF326Q5BKZ1 582 aaKnown RBP18.69■□□□□ 0.58
YBX3-207ENST00000539204 GJD4Q96KN9 370 aaPredicted RBP18.69■□□□□ 0.58
YBX3-207ENST00000539204 UNC13BO14795 1591 aa18.68■□□□□ 0.58
YBX3-207ENST00000539204 C1orf167Q5SNV9 1468 aa18.68■□□□□ 0.58
YBX3-207ENST00000539204 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
YBX3-207ENST00000539204 SF3B2Q13435 895 aaKnown RBP18.65■□□□□ 0.58
YBX3-207ENST00000539204 DEFB132Q7Z7B7 95 aa18.64■□□□□ 0.57
YBX3-207ENST00000539204 BLMP54132 1417 aaPredicted RBP18.63■□□□□ 0.57
YBX3-207ENST00000539204 BCL9LQ86UU0 1499 aa18.63■□□□□ 0.57
YBX3-207ENST00000539204 E9PCH4 1651 aa18.62■□□□□ 0.57
YBX3-207ENST00000539204 NRXN3Q9Y4C0 1643 aa18.6■□□□□ 0.57
YBX3-207ENST00000539204 NUP155O75694 1391 aa18.6■□□□□ 0.57
YBX3-207ENST00000539204 UNC5CLQ8IV45 518 aa18.59■□□□□ 0.57
YBX3-207ENST00000539204 ESCO1Q5FWF5 840 aa18.58■□□□□ 0.56
YBX3-207ENST00000539204 LAMC1P11047 1609 aa18.58■□□□□ 0.56
YBX3-207ENST00000539204 NPHP3Q7Z494 1330 aa18.57■□□□□ 0.56
YBX3-207ENST00000539204 NALCNQ8IZF0 1738 aa18.56■□□□□ 0.56
YBX3-207ENST00000539204 MYOM2P54296 1465 aa18.55■□□□□ 0.56
YBX3-207ENST00000539204 FOXO3O43524 673 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms