RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 ST20-MTHFSA0A0A6YYL1 179 aa28.26■■■□□ 2.12
CDH5-202ENST00000539168 ANP32CO43423 234 aa28.26■■■□□ 2.12
CDH5-202ENST00000539168 SPATA31D1Q6ZQQ2 1576 aa28.26■■■□□ 2.11
CDH5-202ENST00000539168 C11orf95C9JLR9 678 aaPredicted RBP28.25■■■□□ 2.11
CDH5-202ENST00000539168 IDI1Q13907 227 aa28.24■■■□□ 2.11
CDH5-202ENST00000539168 MLECQ14165 292 aa28.24■■■□□ 2.11
CDH5-202ENST00000539168 SCAF11Q99590 1463 aaKnown RBP28.22■■■□□ 2.11
CDH5-202ENST00000539168 VGFO15240 615 aaPredicted RBP28.22■■■□□ 2.11
CDH5-202ENST00000539168 IQGAP1P46940 1657 aa28.21■■■□□ 2.11
CDH5-202ENST00000539168 EIF3AQ14152 1382 aaKnown RBP28.21■■■□□ 2.11
CDH5-202ENST00000539168 ZFYVE9O95405 1425 aa28.2■■■□□ 2.11
CDH5-202ENST00000539168 SLC24A1O60721 1099 aa28.19■■■□□ 2.1
CDH5-202ENST00000539168 ADGRF5Q8IZF2 1346 aa28.19■■■□□ 2.1
CDH5-202ENST00000539168 TMEM131LA2VDJ0 1609 aa28.19■■■□□ 2.1
CDH5-202ENST00000539168 SETBP1Q9Y6X0 1596 aa28.19■■■□□ 2.1
CDH5-202ENST00000539168 ZMYM3Q14202 1370 aa28.18■■■□□ 2.1
CDH5-202ENST00000539168 NEXMIFQ5QGS0 1516 aa28.18■■■□□ 2.1
CDH5-202ENST00000539168 PIK3C2GO75747 1445 aa28.18■■■□□ 2.1
CDH5-202ENST00000539168 FBXO31Q5XUX0 539 aaPredicted RBP28.16■■■□□ 2.1
CDH5-202ENST00000539168 CCER2I3L3R5 266 aa28.15■■■□□ 2.1
CDH5-202ENST00000539168 C14orf93Q9H972 538 aaKnown RBP28.12■■■□□ 2.09
CDH5-202ENST00000539168 CFAP70Q5T0N1 1121 aa28.11■■■□□ 2.09
CDH5-202ENST00000539168 TMF1P82094 1093 aa28.1■■■□□ 2.09
CDH5-202ENST00000539168 STAG3Q9UJ98 1225 aa28.1■■■□□ 2.09
CDH5-202ENST00000539168 TESK2Q96S53 571 aa28.1■■■□□ 2.09
CDH5-202ENST00000539168 CDCA8Q53HL2 280 aa28.07■■■□□ 2.08
CDH5-202ENST00000539168 CENPBP07199 599 aaPredicted RBP28.07■■■□□ 2.08
CDH5-202ENST00000539168 MYO5BQ9ULV0 1848 aa28.06■■■□□ 2.08
CDH5-202ENST00000539168 KDM5AP29375 1690 aaKnown RBP28.05■■■□□ 2.08
CDH5-202ENST00000539168 TNRQ92752 1358 aa28.04■■■□□ 2.08
CDH5-202ENST00000539168 POLR3GLQ9BT43 218 aa28.03■■■□□ 2.08
CDH5-202ENST00000539168 A2ML1A8K2U0 1454 aa28.02■■■□□ 2.08
CDH5-202ENST00000539168 ADGRB1O14514 1584 aa28.01■■■□□ 2.07
CDH5-202ENST00000539168 MYO3AQ8NEV4 1616 aa28■■■□□ 2.07
CDH5-202ENST00000539168 SBNO2Q9Y2G9 1366 aa28■■■□□ 2.07
CDH5-202ENST00000539168 HDGFP51858 240 aaKnown RBP28■■■□□ 2.07
CDH5-202ENST00000539168 FER1L4A9Z1Z3 1794 aa27.98■■■□□ 2.07
CDH5-202ENST00000539168 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.98■■■□□ 2.07
CDH5-202ENST00000539168 NLRP1Q9C000 1473 aa27.97■■■□□ 2.07
CDH5-202ENST00000539168 DISP3Q9P2K9 1392 aa27.96■■■□□ 2.07
CDH5-202ENST00000539168 RIMS2Q9UQ26 1411 aa27.94■■■□□ 2.06
CDH5-202ENST00000539168 PRKRIP1Q9H875 184 aaPredicted RBP27.94■■■□□ 2.06
CDH5-202ENST00000539168 CENPJQ9HC77 1338 aaPredicted RBP27.91■■■□□ 2.06
CDH5-202ENST00000539168 KTN1Q86UP2 1357 aaKnown RBP27.91■■■□□ 2.06
CDH5-202ENST00000539168 C3P01024 1663 aa27.9■■■□□ 2.06
CDH5-202ENST00000539168 YTHDC1Q96MU7 727 aaKnown RBP27.9■■■□□ 2.06
CDH5-202ENST00000539168 NUTM2DQ5VT03 806 aaPredicted RBP27.89■■■□□ 2.06
CDH5-202ENST00000539168 UBR1Q8IWV7 1749 aa27.86■■■□□ 2.05
CDH5-202ENST00000539168 ALKQ9UM73 1620 aa27.85■■■□□ 2.05
CDH5-202ENST00000539168 TRAK1Q9UPV9 953 aa27.84■■■□□ 2.05
CDH5-202ENST00000539168 TMEM132EQ6IEE7 984 aa27.84■■■□□ 2.05
CDH5-202ENST00000539168 QRICH2Q9H0J4 1663 aa27.82■■■□□ 2.04
CDH5-202ENST00000539168 TMEM2Q9UHN6 1383 aa27.82■■■□□ 2.04
CDH5-202ENST00000539168 ARHGEF28Q8N1W1 1705 aaKnown RBP27.82■■■□□ 2.04
CDH5-202ENST00000539168 PUS7Q96PZ0 661 aaKnown RBP27.81■■■□□ 2.04
CDH5-202ENST00000539168 ASXL1Q8IXJ9 1541 aa27.8■■■□□ 2.04
CDH5-202ENST00000539168 RALBP1Q15311 655 aa27.79■■■□□ 2.04
CDH5-202ENST00000539168 YTHDC2Q9H6S0 1430 aaKnown RBP27.78■■■□□ 2.04
CDH5-202ENST00000539168 CEBPAP49715 358 aaPredicted RBP27.77■■■□□ 2.04
CDH5-202ENST00000539168 PER1O15534 1290 aaPredicted RBP27.75■■■□□ 2.03
CDH5-202ENST00000539168 PANK3Q9H999 370 aa27.75■■■□□ 2.03
CDH5-202ENST00000539168 ADAMTSL3P82987 1691 aa27.74■■■□□ 2.03
CDH5-202ENST00000539168 DLC1Q96QB1 1528 aa27.74■■■□□ 2.03
CDH5-202ENST00000539168 SETD1AO15047 1707 aaKnown RBP27.73■■■□□ 2.03
CDH5-202ENST00000539168 EVC2Q86UK5 1308 aa27.72■■■□□ 2.03
CDH5-202ENST00000539168 LRPPRCP42704 1394 aaKnown RBP27.72■■■□□ 2.03
CDH5-202ENST00000539168 SLIT1O75093 1534 aa27.72■■■□□ 2.03
CDH5-202ENST00000539168 THEMISQ8N1K5 641 aaPredicted RBP27.72■■■□□ 2.03
CDH5-202ENST00000539168 RIMS1Q86UR5 1692 aaKnown RBP27.71■■■□□ 2.03
CDH5-202ENST00000539168 EID1Q9Y6B2 187 aa27.71■■■□□ 2.03
CDH5-202ENST00000539168 MYOM1P52179 1685 aa27.7■■■□□ 2.03
CDH5-202ENST00000539168 NRXN3Q9Y4C0 1643 aa27.7■■■□□ 2.02
CDH5-202ENST00000539168 PTPRMP28827 1452 aa27.69■■■□□ 2.02
CDH5-202ENST00000539168 ARHGAP23Q9P227 1491 aa27.69■■■□□ 2.02
CDH5-202ENST00000539168 PLEKHG1Q9ULL1 1385 aa27.69■■■□□ 2.02
CDH5-202ENST00000539168 ABCC11Q96J66 1382 aa27.68■■■□□ 2.02
CDH5-202ENST00000539168 MRS2Q9HD23 443 aa27.67■■■□□ 2.02
CDH5-202ENST00000539168 KNSTRNQ9Y448 316 aa27.67■■■□□ 2.02
CDH5-202ENST00000539168 MYBBP1AQ9BQG0 1328 aaKnown RBP27.67■■■□□ 2.02
CDH5-202ENST00000539168 STK26Q9P289 416 aa27.66■■■□□ 2.02
CDH5-202ENST00000539168 PARD3Q8TEW0 1356 aa27.66■■■□□ 2.02
CDH5-202ENST00000539168 POGKQ9P215 609 aa27.65■■■□□ 2.02
CDH5-202ENST00000539168 NPC1L1Q9UHC9 1359 aa27.65■■■□□ 2.02
CDH5-202ENST00000539168 SIRT1Q96EB6 747 aa27.65■■■□□ 2.02
CDH5-202ENST00000539168 NINLQ9Y2I6 1382 aa27.63■■■□□ 2.01
CDH5-202ENST00000539168 TXNDC2Q86VQ3 553 aa27.62■■■□□ 2.01
CDH5-202ENST00000539168 BRD4O60885 1362 aaPredicted RBP27.62■■■□□ 2.01
CDH5-202ENST00000539168 KNDC1Q76NI1 1749 aa27.62■■■□□ 2.01
CDH5-202ENST00000539168 CEP170BQ9Y4F5 1589 aaPredicted RBP27.61■■■□□ 2.01
CDH5-202ENST00000539168 BCANQ96GW7 911 aa27.61■■■□□ 2.01
CDH5-202ENST00000539168 PRAM1Q96QH2 718 aa27.61■■■□□ 2.01
CDH5-202ENST00000539168 TECPR2O15040 1411 aa27.6■■■□□ 2.01
CDH5-202ENST00000539168 TULP4Q9NRJ4 1543 aa27.6■■■□□ 2.01
CDH5-202ENST00000539168 SETD1BQ9UPS6 1966 aaKnown RBP27.59■■■□□ 2.01
CDH5-202ENST00000539168 FAM135BQ49AJ0 1406 aa27.58■■■□□ 2.01
CDH5-202ENST00000539168 PLPPR3Q6T4P5 718 aa27.58■■■□□ 2.01
CDH5-202ENST00000539168 NLRP13Q86W25 1043 aa27.57■■■□□ 2
CDH5-202ENST00000539168 ATAD2Q6PL18 1390 aa27.57■■■□□ 2
CDH5-202ENST00000539168 ADAMTS13Q76LX8 1427 aa27.57■■■□□ 2
CDH5-202ENST00000539168 ZNF142P52746 1687 aaPredicted RBP27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms