RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 KDM4FA0A1W2PPD8 638 aa5.09□□□□□ -1.59
PTPN22-211ENST00000538253 KDM5AP29375 1690 aaKnown RBP5.09□□□□□ -1.59
PTPN22-211ENST00000538253 EIF3AQ14152 1382 aaKnown RBP5.09□□□□□ -1.59
PTPN22-211ENST00000538253 UBE2Q2Q8WVN8 375 aa5.09□□□□□ -1.59
PTPN22-211ENST00000538253 PREX1Q8TCU6 1659 aa5.09□□□□□ -1.6
PTPN22-211ENST00000538253 CAMSAP1Q5T5Y3 1602 aa5.08□□□□□ -1.6
PTPN22-211ENST00000538253 ZFYVE9O95405 1425 aa5.08□□□□□ -1.6
PTPN22-211ENST00000538253 TXNDC2Q86VQ3 553 aa5.08□□□□□ -1.6
PTPN22-211ENST00000538253 UGGT1Q9NYU2 1555 aa5.08□□□□□ -1.6
PTPN22-211ENST00000538253 IQSEC2Q5JU85 1478 aa5.08□□□□□ -1.6
PTPN22-211ENST00000538253 CENPBP07199 599 aaPredicted RBP5.08□□□□□ -1.6
PTPN22-211ENST00000538253 TRPM2O94759 1503 aa5.07□□□□□ -1.6
PTPN22-211ENST00000538253 NCOA3Q9Y6Q9 1424 aa5.07□□□□□ -1.6
PTPN22-211ENST00000538253 TMEM2Q9UHN6 1383 aa5.07□□□□□ -1.6
PTPN22-211ENST00000538253 ADGRB3O60242 1522 aa5.07□□□□□ -1.6
PTPN22-211ENST00000538253 RNF39Q9H2S5 420 aa5.07□□□□□ -1.6
PTPN22-211ENST00000538253 TBX22Q9Y458 520 aa5.07□□□□□ -1.6
PTPN22-211ENST00000538253 CEP170BQ9Y4F5 1589 aaPredicted RBP5.07□□□□□ -1.6
PTPN22-211ENST00000538253 TONSLQ96HA7 1378 aa5.07□□□□□ -1.6
PTPN22-211ENST00000538253 CLTCQ00610 1675 aaKnown RBP5.07□□□□□ -1.6
PTPN22-211ENST00000538253 DIP2AQ14689 1571 aa5.07□□□□□ -1.6
PTPN22-211ENST00000538253 PLEKHG1Q9ULL1 1385 aa5.07□□□□□ -1.6
PTPN22-211ENST00000538253 SCAF11Q99590 1463 aaKnown RBP5.07□□□□□ -1.6
PTPN22-211ENST00000538253 NPHP4O75161 1426 aaPredicted RBP5.06□□□□□ -1.6
PTPN22-211ENST00000538253 RIMS2Q9UQ26 1411 aa5.06□□□□□ -1.6
PTPN22-211ENST00000538253 SIRT1Q96EB6 747 aa5.06□□□□□ -1.6
PTPN22-211ENST00000538253 ZNF142P52746 1687 aaPredicted RBP5.05□□□□□ -1.6
PTPN22-211ENST00000538253 SLIT1O75093 1534 aa5.05□□□□□ -1.6
PTPN22-211ENST00000538253 CDCA8Q53HL2 280 aa5.05□□□□□ -1.6
PTPN22-211ENST00000538253 DHX57Q6P158 1386 aaKnown RBP5.05□□□□□ -1.6
PTPN22-211ENST00000538253 CPS1P31327 1500 aa5.05□□□□□ -1.6
PTPN22-211ENST00000538253 IDI1Q13907 227 aa5.05□□□□□ -1.6
PTPN22-211ENST00000538253 ARHGAP23Q9P227 1491 aa5.05□□□□□ -1.6
PTPN22-211ENST00000538253 CCER1Q8TC90 406 aaPredicted RBP5.05□□□□□ -1.6
PTPN22-211ENST00000538253 C3P01024 1663 aa5.04□□□□□ -1.6
PTPN22-211ENST00000538253 MED14O60244 1454 aa5.04□□□□□ -1.6
PTPN22-211ENST00000538253 MROH1Q8NDA8 1641 aa5.04□□□□□ -1.6
PTPN22-211ENST00000538253 KCNA6P17658 529 aa5.04□□□□□ -1.6
PTPN22-211ENST00000538253 CEBPAP49715 358 aaPredicted RBP5.04□□□□□ -1.6
PTPN22-211ENST00000538253 MYO3AQ8NEV4 1616 aa5.04□□□□□ -1.6
PTPN22-211ENST00000538253 ANO8Q9HCE9 1232 aaPredicted RBP5.04□□□□□ -1.6
PTPN22-211ENST00000538253 TOM1O60784 492 aa5.03□□□□□ -1.6
PTPN22-211ENST00000538253 FBXO31Q5XUX0 539 aaPredicted RBP5.03□□□□□ -1.6
PTPN22-211ENST00000538253 MYOM2P54296 1465 aa5.03□□□□□ -1.6
PTPN22-211ENST00000538253 TULP1O00294 542 aaPredicted RBP5.03□□□□□ -1.6
PTPN22-211ENST00000538253 NKTRP30414 1462 aaKnown RBP5.03□□□□□ -1.6
PTPN22-211ENST00000538253 C14orf37Q86TY3 774 aa5.02□□□□□ -1.61
PTPN22-211ENST00000538253 CEP152O94986 1710 aa5.02□□□□□ -1.61
PTPN22-211ENST00000538253 FBXO41Q8TF61 875 aa5.02□□□□□ -1.61
PTPN22-211ENST00000538253 SPHKAPQ2M3C7 1700 aa5.02□□□□□ -1.61
PTPN22-211ENST00000538253 SYNMO15061 1565 aa5.01□□□□□ -1.61
PTPN22-211ENST00000538253 CADPS2Q86UW7 1296 aa5.01□□□□□ -1.61
PTPN22-211ENST00000538253 LRPPRCP42704 1394 aaKnown RBP5.01□□□□□ -1.61
PTPN22-211ENST00000538253 PCGF6Q9BYE7 350 aa5.01□□□□□ -1.61
PTPN22-211ENST00000538253 MSH6P52701 1360 aa5.01□□□□□ -1.61
PTPN22-211ENST00000538253 ATF3P18847 181 aa5.01□□□□□ -1.61
PTPN22-211ENST00000538253 PROSER2Q86WR7 435 aaPredicted RBP5.01□□□□□ -1.61
PTPN22-211ENST00000538253 LAMC1P11047 1609 aa5.01□□□□□ -1.61
PTPN22-211ENST00000538253 KIF1BO60333 1816 aa5.01□□□□□ -1.61
PTPN22-211ENST00000538253 POGKQ9P215 609 aa5□□□□□ -1.61
PTPN22-211ENST00000538253 BRD4O60885 1362 aaPredicted RBP5□□□□□ -1.61
PTPN22-211ENST00000538253 PUS7Q96PZ0 661 aaKnown RBP5□□□□□ -1.61
PTPN22-211ENST00000538253 PIK3C2BO00750 1634 aa5□□□□□ -1.61
PTPN22-211ENST00000538253 DCCP43146 1447 aa5□□□□□ -1.61
PTPN22-211ENST00000538253 PRAG1Q86YV5 1406 aa4.99□□□□□ -1.61
PTPN22-211ENST00000538253 PKNOX2Q96KN3 472 aa4.99□□□□□ -1.61
PTPN22-211ENST00000538253 C14orf93Q9H972 538 aaKnown RBP4.99□□□□□ -1.61
PTPN22-211ENST00000538253 E9PCH4 1651 aa4.99□□□□□ -1.61
PTPN22-211ENST00000538253 FAM135BQ49AJ0 1406 aa4.99□□□□□ -1.61
PTPN22-211ENST00000538253 ABCC11Q96J66 1382 aa4.99□□□□□ -1.61
PTPN22-211ENST00000538253 DCAF11Q8TEB1 546 aa4.99□□□□□ -1.61
PTPN22-211ENST00000538253 SPATA31E1Q6ZUB1 1445 aa4.99□□□□□ -1.61
PTPN22-211ENST00000538253 NCKAP5LQ9HCH0 1330 aa4.99□□□□□ -1.61
PTPN22-211ENST00000538253 RGL3Q3MIN7 710 aa4.99□□□□□ -1.61
PTPN22-211ENST00000538253 PTCH1Q13635 1447 aa4.98□□□□□ -1.61
PTPN22-211ENST00000538253 SETBP1Q9Y6X0 1596 aa4.98□□□□□ -1.61
PTPN22-211ENST00000538253 CERKQ8TCT0 537 aa4.98□□□□□ -1.61
PTPN22-211ENST00000538253 C19orf44Q9H6X5 657 aa4.98□□□□□ -1.61
PTPN22-211ENST00000538253 PDIA4P13667 645 aaKnown RBP4.98□□□□□ -1.61
PTPN22-211ENST00000538253 ANP32EQ9BTT0 268 aa4.98□□□□□ -1.61
PTPN22-211ENST00000538253 HSPA2P54652 639 aa4.98□□□□□ -1.61
PTPN22-211ENST00000538253 PSME1Q06323 249 aa4.98□□□□□ -1.61
PTPN22-211ENST00000538253 NINLQ9Y2I6 1382 aa4.97□□□□□ -1.61
PTPN22-211ENST00000538253 TMEM131LA2VDJ0 1609 aa4.97□□□□□ -1.61
PTPN22-211ENST00000538253 UBR1Q8IWV7 1749 aa4.97□□□□□ -1.61
PTPN22-211ENST00000538253 DLC1Q96QB1 1528 aa4.97□□□□□ -1.61
PTPN22-211ENST00000538253 NEUROD1Q13562 356 aa4.97□□□□□ -1.61
PTPN22-211ENST00000538253 POLR1AO95602 1720 aaPredicted RBP4.97□□□□□ -1.61
PTPN22-211ENST00000538253 IQGAP1P46940 1657 aa4.97□□□□□ -1.61
PTPN22-211ENST00000538253 AMOTL2Q9Y2J4 779 aa4.96□□□□□ -1.61
PTPN22-211ENST00000538253 EVC2Q86UK5 1308 aa4.96□□□□□ -1.62
PTPN22-211ENST00000538253 TECPR2O15040 1411 aa4.96□□□□□ -1.62
PTPN22-211ENST00000538253 CLTCL1P53675 1640 aa4.96□□□□□ -1.62
PTPN22-211ENST00000538253 HOMEZQ8IX15 550 aa4.96□□□□□ -1.62
PTPN22-211ENST00000538253 ROCK2O75116 1388 aaKnown RBP4.96□□□□□ -1.62
PTPN22-211ENST00000538253 ATAD2Q6PL18 1390 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 CARD11Q9BXL7 1154 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 PIK3C2GO75747 1445 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 ANKARQ7Z5J8 1434 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 CENPJQ9HC77 1338 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms