RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CLTCL1P53675 1640 aa25.8■■□□□ 1.72
SFSWAP-205ENST00000537164 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.79■■□□□ 1.72
SFSWAP-205ENST00000537164 ACIN1Q9UKV3 1341 aaKnown RBP25.78■■□□□ 1.72
SFSWAP-205ENST00000537164 CHGAP10645 457 aaKnown RBP25.77■■□□□ 1.72
SFSWAP-205ENST00000537164 SLC4A1APQ9BWU0 796 aaKnown RBP25.77■■□□□ 1.72
SFSWAP-205ENST00000537164 KIF1BO60333 1816 aa25.76■■□□□ 1.71
SFSWAP-205ENST00000537164 SETD5Q9C0A6 1442 aa25.75■■□□□ 1.71
SFSWAP-205ENST00000537164 XIRP1Q702N8 1843 aaKnown RBP25.74■■□□□ 1.71
SFSWAP-205ENST00000537164 NWD1Q149M9 1564 aa25.74■■□□□ 1.71
SFSWAP-205ENST00000537164 UBAP1LF5GYI3 381 aa25.74■■□□□ 1.71
SFSWAP-205ENST00000537164 SLC26A8Q96RN1 970 aa25.74■■□□□ 1.71
SFSWAP-205ENST00000537164 CHD2O14647 1828 aaKnown RBP25.72■■□□□ 1.71
SFSWAP-205ENST00000537164 PPP1R15AO75807 674 aaPredicted RBP25.72■■□□□ 1.71
SFSWAP-205ENST00000537164 DIP2AQ14689 1571 aa25.72■■□□□ 1.71
SFSWAP-205ENST00000537164 KCNA6P17658 529 aa25.71■■□□□ 1.71
SFSWAP-205ENST00000537164 ALKQ9UM73 1620 aa25.7■■□□□ 1.71
SFSWAP-205ENST00000537164 TBX22Q9Y458 520 aa25.7■■□□□ 1.7
SFSWAP-205ENST00000537164 ADAMTS13Q76LX8 1427 aa25.7■■□□□ 1.7
SFSWAP-205ENST00000537164 NKTRP30414 1462 aaKnown RBP25.69■■□□□ 1.7
SFSWAP-205ENST00000537164 TOM1O60784 492 aa25.68■■□□□ 1.7
SFSWAP-205ENST00000537164 NEXMIFQ5QGS0 1516 aa25.68■■□□□ 1.7
SFSWAP-205ENST00000537164 MPHOSPH9Q99550 1183 aa25.67■■□□□ 1.7
SFSWAP-205ENST00000537164 SETBP1Q9Y6X0 1596 aa25.66■■□□□ 1.7
SFSWAP-205ENST00000537164 NRXN3Q9Y4C0 1643 aa25.66■■□□□ 1.7
SFSWAP-205ENST00000537164 BCANQ96GW7 911 aa25.65■■□□□ 1.7
SFSWAP-205ENST00000537164 PIK3R4Q99570 1358 aa25.65■■□□□ 1.7
SFSWAP-205ENST00000537164 NUTM2DQ5VT03 806 aaPredicted RBP25.64■■□□□ 1.7
SFSWAP-205ENST00000537164 RAB3GAP2Q9H2M9 1393 aa25.64■■□□□ 1.69
SFSWAP-205ENST00000537164 ZNF326Q5BKZ1 582 aaKnown RBP25.62■■□□□ 1.69
SFSWAP-205ENST00000537164 TMEM94Q12767 1356 aa25.6■■□□□ 1.69
SFSWAP-205ENST00000537164 FOXD1Q16676 465 aa25.6■■□□□ 1.69
SFSWAP-205ENST00000537164 HRCP23327 699 aa25.58■■□□□ 1.69
SFSWAP-205ENST00000537164 RPGRIP1LQ68CZ1 1315 aa25.58■■□□□ 1.69
SFSWAP-205ENST00000537164 PPLO60437 1756 aa25.57■■□□□ 1.68
SFSWAP-205ENST00000537164 CCDC144AA2RUR9 1427 aa25.57■■□□□ 1.68
SFSWAP-205ENST00000537164 PROSER2Q86WR7 435 aaPredicted RBP25.57■■□□□ 1.68
SFSWAP-205ENST00000537164 SENP3Q9H4L4 574 aaPredicted RBP25.57■■□□□ 1.68
SFSWAP-205ENST00000537164 NCOA3Q9Y6Q9 1424 aa25.54■■□□□ 1.68
SFSWAP-205ENST00000537164 SPATA31E1Q6ZUB1 1445 aa25.54■■□□□ 1.68
SFSWAP-205ENST00000537164 PIP4K2BP78356 416 aa25.53■■□□□ 1.68
SFSWAP-205ENST00000537164 XRN1Q8IZH2 1706 aaKnown RBP25.53■■□□□ 1.68
SFSWAP-205ENST00000537164 PTPRUQ92729 1446 aa25.53■■□□□ 1.68
SFSWAP-205ENST00000537164 VGFO15240 615 aaPredicted RBP25.52■■□□□ 1.68
SFSWAP-205ENST00000537164 SETD1AO15047 1707 aaKnown RBP25.51■■□□□ 1.67
SFSWAP-205ENST00000537164 IFT172Q9UG01 1749 aa25.51■■□□□ 1.67
SFSWAP-205ENST00000537164 SCAF1Q9H7N4 1312 aaKnown RBP25.48■■□□□ 1.67
SFSWAP-205ENST00000537164 METP08581 1390 aa25.47■■□□□ 1.67
SFSWAP-205ENST00000537164 AMOTL2Q9Y2J4 779 aa25.47■■□□□ 1.67
SFSWAP-205ENST00000537164 RBM33Q96EV2 1170 aaKnown RBP25.46■■□□□ 1.67
SFSWAP-205ENST00000537164 MSH6P52701 1360 aa25.45■■□□□ 1.67
SFSWAP-205ENST00000537164 HSPA1LP34931 641 aa25.45■■□□□ 1.66
SFSWAP-205ENST00000537164 FAM135BQ49AJ0 1406 aa25.45■■□□□ 1.66
SFSWAP-205ENST00000537164 ANKRD30BQ9BXX2 1392 aa25.43■■□□□ 1.66
SFSWAP-205ENST00000537164 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.41■■□□□ 1.66
SFSWAP-205ENST00000537164 PRAG1Q86YV5 1406 aa25.41■■□□□ 1.66
SFSWAP-205ENST00000537164 ROBO1Q9Y6N7 1651 aa25.39■■□□□ 1.65
SFSWAP-205ENST00000537164 RGL3Q3MIN7 710 aa25.38■■□□□ 1.65
SFSWAP-205ENST00000537164 C19orf44Q9H6X5 657 aa25.38■■□□□ 1.65
SFSWAP-205ENST00000537164 ADGRF5Q8IZF2 1346 aa25.37■■□□□ 1.65
SFSWAP-205ENST00000537164 DCCP43146 1447 aa25.36■■□□□ 1.65
SFSWAP-205ENST00000537164 SLAIN2Q9P270 581 aa25.35■■□□□ 1.65
SFSWAP-205ENST00000537164 PTCH1Q13635 1447 aa25.35■■□□□ 1.65
SFSWAP-205ENST00000537164 PIK3C2GO75747 1445 aa25.34■■□□□ 1.65
SFSWAP-205ENST00000537164 NRXN1Q9ULB1 1477 aa25.33■■□□□ 1.65
SFSWAP-205ENST00000537164 CADPS2Q86UW7 1296 aa25.32■■□□□ 1.64
SFSWAP-205ENST00000537164 MYOM2P54296 1465 aa25.32■■□□□ 1.64
SFSWAP-205ENST00000537164 C14orf37Q86TY3 774 aa25.31■■□□□ 1.64
SFSWAP-205ENST00000537164 NALCNQ8IZF0 1738 aa25.3■■□□□ 1.64
SFSWAP-205ENST00000537164 ADGRL3Q9HAR2 1447 aa25.29■■□□□ 1.64
SFSWAP-205ENST00000537164 ATF3P18847 181 aa25.28■■□□□ 1.64
SFSWAP-205ENST00000537164 ROBO2Q9HCK4 1378 aa25.27■■□□□ 1.64
SFSWAP-205ENST00000537164 ASXL1Q8IXJ9 1541 aa25.27■■□□□ 1.64
SFSWAP-205ENST00000537164 LAMC1P11047 1609 aa25.26■■□□□ 1.63
SFSWAP-205ENST00000537164 TECPR2O15040 1411 aa25.26■■□□□ 1.63
SFSWAP-205ENST00000537164 DISP3Q9P2K9 1392 aa25.25■■□□□ 1.63
SFSWAP-205ENST00000537164 KNDC1Q76NI1 1749 aa25.25■■□□□ 1.63
SFSWAP-205ENST00000537164 MED1Q15648 1581 aaPredicted RBP25.23■■□□□ 1.63
SFSWAP-205ENST00000537164 C14orf93Q9H972 538 aaKnown RBP25.22■■□□□ 1.63
SFSWAP-205ENST00000537164 MST1RQ04912 1400 aa25.21■■□□□ 1.63
SFSWAP-205ENST00000537164 LRPPRCP42704 1394 aaKnown RBP25.21■■□□□ 1.63
SFSWAP-205ENST00000537164 ABCC11Q96J66 1382 aa25.21■■□□□ 1.63
SFSWAP-205ENST00000537164 PHLPP1O60346 1717 aa25.21■■□□□ 1.63
SFSWAP-205ENST00000537164 STAC3Q96MF2 364 aa25.21■■□□□ 1.63
SFSWAP-205ENST00000537164 AHDC1Q5TGY3 1603 aaPredicted RBP25.2■■□□□ 1.62
SFSWAP-205ENST00000537164 COL16A1Q07092 1604 aaPredicted RBP25.19■■□□□ 1.62
SFSWAP-205ENST00000537164 YTHDC2Q9H6S0 1430 aaKnown RBP25.17■■□□□ 1.62
SFSWAP-205ENST00000537164 DHX57Q6P158 1386 aaKnown RBP25.16■■□□□ 1.62
SFSWAP-205ENST00000537164 TMEM132EQ6IEE7 984 aa25.15■■□□□ 1.62
SFSWAP-205ENST00000537164 BRINP3Q76B58 766 aa25.15■■□□□ 1.62
SFSWAP-205ENST00000537164 SIRT1Q96EB6 747 aa25.14■■□□□ 1.62
SFSWAP-205ENST00000537164 CDC42BPGQ6DT37 1551 aa25.14■■□□□ 1.61
SFSWAP-205ENST00000537164 NHSL1Q5SYE7 1610 aa25.13■■□□□ 1.61
SFSWAP-205ENST00000537164 CFAP70Q5T0N1 1121 aa25.13■■□□□ 1.61
SFSWAP-205ENST00000537164 DCAF11Q8TEB1 546 aa25.12■■□□□ 1.61
SFSWAP-205ENST00000537164 ADGRB1O14514 1584 aa25.12■■□□□ 1.61
SFSWAP-205ENST00000537164 C1orf167Q5SNV9 1468 aa25.11■■□□□ 1.61
SFSWAP-205ENST00000537164 STK26Q9P289 416 aa25.1■■□□□ 1.61
SFSWAP-205ENST00000537164 JCADQ9P266 1359 aa25.08■■□□□ 1.61
SFSWAP-205ENST00000537164 DLC1Q96QB1 1528 aa25.08■■□□□ 1.61
SFSWAP-205ENST00000537164 WAPLQ7Z5K2 1190 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms