RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 NUP160Q12769 1436 aa18.77■□□□□ 0.6
CDH20-202ENST00000536675 TRMT2AQ8IZ69 625 aaKnown RBP18.77■□□□□ 0.6
CDH20-202ENST00000536675 EIF3AQ14152 1382 aaKnown RBP18.77■□□□□ 0.6
CDH20-202ENST00000536675 AMER1Q5JTC6 1135 aaPredicted RBP18.77■□□□□ 0.6
CDH20-202ENST00000536675 USP19O94966 1318 aa18.76■□□□□ 0.59
CDH20-202ENST00000536675 SPINK5Q9NQ38 1064 aaPredicted RBP18.75■□□□□ 0.59
CDH20-202ENST00000536675 FAM43AQ8N2R8 423 aa18.75■□□□□ 0.59
CDH20-202ENST00000536675 EIF5BO60841 1220 aaKnown RBP18.74■□□□□ 0.59
CDH20-202ENST00000536675 BCAR3O75815 825 aa18.74■□□□□ 0.59
CDH20-202ENST00000536675 CCDC146Q8IYE0 955 aa18.74■□□□□ 0.59
CDH20-202ENST00000536675 IQGAP3Q86VI3 1631 aa18.74■□□□□ 0.59
CDH20-202ENST00000536675 IGHDP01880 384 aa18.74■□□□□ 0.59
CDH20-202ENST00000536675 PREX2Q70Z35 1606 aa18.73■□□□□ 0.59
CDH20-202ENST00000536675 NKTRP30414 1462 aaKnown RBP18.73■□□□□ 0.59
CDH20-202ENST00000536675 FBLN2P98095 1184 aa18.72■□□□□ 0.59
CDH20-202ENST00000536675 UBE2Q2Q8WVN8 375 aa18.72■□□□□ 0.59
CDH20-202ENST00000536675 RSPH4AQ5TD94 716 aa18.71■□□□□ 0.59
CDH20-202ENST00000536675 PIK3C2GO75747 1445 aa18.71■□□□□ 0.59
CDH20-202ENST00000536675 IQGAP1P46940 1657 aa18.71■□□□□ 0.59
CDH20-202ENST00000536675 POGKQ9P215 609 aa18.71■□□□□ 0.59
CDH20-202ENST00000536675 SYNMO15061 1565 aa18.7■□□□□ 0.58
CDH20-202ENST00000536675 ASXL1Q8IXJ9 1541 aa18.7■□□□□ 0.58
CDH20-202ENST00000536675 SEC24BO95487 1268 aa18.7■□□□□ 0.58
CDH20-202ENST00000536675 SYCP2Q9BX26 1530 aa18.69■□□□□ 0.58
CDH20-202ENST00000536675 APAF1O14727 1248 aa18.69■□□□□ 0.58
CDH20-202ENST00000536675 MAST1Q9Y2H9 1570 aa18.69■□□□□ 0.58
CDH20-202ENST00000536675 ATP10AO60312 1499 aa18.69■□□□□ 0.58
CDH20-202ENST00000536675 ABCC2Q92887 1545 aa18.68■□□□□ 0.58
CDH20-202ENST00000536675 RSPH6AQ9H0K4 717 aa18.67■□□□□ 0.58
CDH20-202ENST00000536675 MYOM1P52179 1685 aa18.66■□□□□ 0.58
CDH20-202ENST00000536675 MADDQ8WXG6 1647 aa18.66■□□□□ 0.58
CDH20-202ENST00000536675 E9PSI1 815 aa18.66■□□□□ 0.58
CDH20-202ENST00000536675 DMRT2Q9Y5R5 561 aa18.66■□□□□ 0.58
CDH20-202ENST00000536675 NLRP1Q9C000 1473 aa18.65■□□□□ 0.58
CDH20-202ENST00000536675 BECN1Q14457 450 aa18.65■□□□□ 0.58
CDH20-202ENST00000536675 SLKQ9H2G2 1235 aaPredicted RBP18.64■□□□□ 0.58
CDH20-202ENST00000536675 CGNL1Q0VF96 1302 aa18.64■□□□□ 0.57
CDH20-202ENST00000536675 MAPK8IP3Q9UPT6 1336 aa18.64■□□□□ 0.57
CDH20-202ENST00000536675 PLXNC1O60486 1568 aa18.64■□□□□ 0.57
CDH20-202ENST00000536675 CDCA8Q53HL2 280 aa18.63■□□□□ 0.57
CDH20-202ENST00000536675 PDE3AQ14432 1141 aa18.63■□□□□ 0.57
CDH20-202ENST00000536675 CLUAP1Q96AJ1 413 aa18.63■□□□□ 0.57
CDH20-202ENST00000536675 NPC1L1Q9UHC9 1359 aa18.62■□□□□ 0.57
CDH20-202ENST00000536675 PANK1Q8TE04 598 aa18.62■□□□□ 0.57
CDH20-202ENST00000536675 COG6Q9Y2V7 657 aa18.61■□□□□ 0.57
CDH20-202ENST00000536675 ARHGAP5Q13017 1502 aa18.61■□□□□ 0.57
CDH20-202ENST00000536675 ANTXR1Q9H6X2 564 aa18.6■□□□□ 0.57
CDH20-202ENST00000536675 SCAF11Q99590 1463 aaKnown RBP18.6■□□□□ 0.57
CDH20-202ENST00000536675 CENPJQ9HC77 1338 aaPredicted RBP18.59■□□□□ 0.57
CDH20-202ENST00000536675 TTC37Q6PGP7 1564 aa18.59■□□□□ 0.57
CDH20-202ENST00000536675 DUOX2Q9NRD8 1548 aa18.59■□□□□ 0.57
CDH20-202ENST00000536675 RRAGDQ9NQL2 400 aaPredicted RBP18.59■□□□□ 0.57
CDH20-202ENST00000536675 SPHKAPQ2M3C7 1700 aa18.59■□□□□ 0.57
CDH20-202ENST00000536675 NINLQ9Y2I6 1382 aa18.58■□□□□ 0.57
CDH20-202ENST00000536675 CANXP27824 592 aaKnown RBP18.58■□□□□ 0.56
CDH20-202ENST00000536675 KDM5AP29375 1690 aaKnown RBP18.57■□□□□ 0.56
CDH20-202ENST00000536675 L1TD1Q5T7N2 865 aaKnown RBP18.57■□□□□ 0.56
CDH20-202ENST00000536675 SCAPERQ9BY12 1400 aa18.55■□□□□ 0.56
CDH20-202ENST00000536675 CEP152O94986 1710 aa18.55■□□□□ 0.56
CDH20-202ENST00000536675 NGEFQ8N5V2 710 aa18.55■□□□□ 0.56
CDH20-202ENST00000536675 TBC1D32Q96NH3 1257 aa18.54■□□□□ 0.56
CDH20-202ENST00000536675 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.54■□□□□ 0.56
CDH20-202ENST00000536675 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
CDH20-202ENST00000536675 WWC1Q8IX03 1113 aa18.54■□□□□ 0.56
CDH20-202ENST00000536675 TBC1D2Q9BYX2 928 aa18.54■□□□□ 0.56
CDH20-202ENST00000536675 UPF2Q9HAU5 1272 aaKnown RBP18.52■□□□□ 0.56
CDH20-202ENST00000536675 PCDHB15Q9Y5E8 787 aa18.52■□□□□ 0.56
CDH20-202ENST00000536675 PMFBP1Q8TBY8 1022 aa18.51■□□□□ 0.55
CDH20-202ENST00000536675 CARD14Q9BXL6 1004 aa18.51■□□□□ 0.55
CDH20-202ENST00000536675 PDZRN3Q9UPQ7 1066 aa18.5■□□□□ 0.55
CDH20-202ENST00000536675 RLBP1P12271 317 aa18.49■□□□□ 0.55
CDH20-202ENST00000536675 RARSP54136 660 aaKnown RBP18.49■□□□□ 0.55
CDH20-202ENST00000536675 TNNQ9UQP3 1299 aa18.49■□□□□ 0.55
CDH20-202ENST00000536675 TRPM2O94759 1503 aa18.49■□□□□ 0.55
CDH20-202ENST00000536675 XRCC6P12956 609 aaKnown RBP eCLIP18.49■□□□□ 0.55
CDH20-202ENST00000536675 ZMYM3Q14202 1370 aa18.48■□□□□ 0.55
CDH20-202ENST00000536675 ARXQ96QS3 562 aa18.48■□□□□ 0.55
CDH20-202ENST00000536675 CLTCL1P53675 1640 aa18.48■□□□□ 0.55
CDH20-202ENST00000536675 FSD2A1L4K1 749 aa18.47■□□□□ 0.55
CDH20-202ENST00000536675 SPRYD3Q8NCJ5 442 aa18.47■□□□□ 0.55
CDH20-202ENST00000536675 ERVK-7P63135 1459 aa18.47■□□□□ 0.55
CDH20-202ENST00000536675 KIAA1210Q9ULL0 1709 aa18.46■□□□□ 0.55
CDH20-202ENST00000536675 GOLGA6L3A6NEY3 463 aa18.46■□□□□ 0.55
CDH20-202ENST00000536675 AAMPQ13685 434 aa18.46■□□□□ 0.55
CDH20-202ENST00000536675 SHPRHQ149N8 1683 aa18.46■□□□□ 0.55
CDH20-202ENST00000536675 POLR3AO14802 1390 aaPredicted RBP18.46■□□□□ 0.55
CDH20-202ENST00000536675 NEUROD2Q15784 382 aa18.46■□□□□ 0.55
CDH20-202ENST00000536675 MCM4P33991 863 aa18.45■□□□□ 0.54
CDH20-202ENST00000536675 STAC3Q96MF2 364 aa18.45■□□□□ 0.54
CDH20-202ENST00000536675 RRP7AQ9Y3A4 280 aaKnown RBP18.45■□□□□ 0.54
CDH20-202ENST00000536675 BCL2L13Q9BXK5 485 aa18.44■□□□□ 0.54
CDH20-202ENST00000536675 PANK2Q9BZ23 570 aa18.44■□□□□ 0.54
CDH20-202ENST00000536675 GZF1Q9H116 711 aaPredicted RBP18.44■□□□□ 0.54
CDH20-202ENST00000536675 PTPRTO14522 1441 aa18.43■□□□□ 0.54
CDH20-202ENST00000536675 RWDD1Q9H446 243 aaPredicted RBP18.43■□□□□ 0.54
CDH20-202ENST00000536675 RUNDC1Q96C34 613 aa18.41■□□□□ 0.54
CDH20-202ENST00000536675 IQSEC2Q5JU85 1478 aa18.4■□□□□ 0.54
CDH20-202ENST00000536675 TCP11L2Q8N4U5 519 aa18.4■□□□□ 0.54
CDH20-202ENST00000536675 RTEL1-TNFRSF6BF6WH68 1400 aa18.4■□□□□ 0.54
CDH20-202ENST00000536675 CFAP70Q5T0N1 1121 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms