RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MYOM2P54296 1465 aa18.11■□□□□ 0.49
VPS33B-202ENST00000535906 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
VPS33B-202ENST00000535906 WASHC2CQ9Y4E1 1318 aa18.1■□□□□ 0.49
VPS33B-202ENST00000535906 CFAP70Q5T0N1 1121 aa18.1■□□□□ 0.49
VPS33B-202ENST00000535906 IFT172Q9UG01 1749 aa18.09■□□□□ 0.49
VPS33B-202ENST00000535906 SENP3-EIF4A1A0A087X0R7 540 aa18.09■□□□□ 0.49
VPS33B-202ENST00000535906 CC2D1BQ5T0F9 858 aaKnown RBP18.09■□□□□ 0.49
VPS33B-202ENST00000535906 NLRP13Q86W25 1043 aa18.09■□□□□ 0.49
VPS33B-202ENST00000535906 ERICH6BQ5W0A0 696 aa18.08■□□□□ 0.49
VPS33B-202ENST00000535906 ABCC3O15438 1527 aa18.07■□□□□ 0.48
VPS33B-202ENST00000535906 RICTORQ6R327 1708 aa18.07■□□□□ 0.48
VPS33B-202ENST00000535906 DIP2CQ9Y2E4 1556 aa18.06■□□□□ 0.48
VPS33B-202ENST00000535906 ADGRB3O60242 1522 aa18.06■□□□□ 0.48
VPS33B-202ENST00000535906 CHGAP10645 457 aaKnown RBP18.06■□□□□ 0.48
VPS33B-202ENST00000535906 EIF3AQ14152 1382 aaKnown RBP18.05■□□□□ 0.48
VPS33B-202ENST00000535906 NRXN1Q9ULB1 1477 aa18.05■□□□□ 0.48
VPS33B-202ENST00000535906 SMG6Q86US8 1419 aaKnown RBP18.04■□□□□ 0.48
VPS33B-202ENST00000535906 NOS1P29475 1434 aa18.04■□□□□ 0.48
VPS33B-202ENST00000535906 CDCA8Q53HL2 280 aa18.03■□□□□ 0.48
VPS33B-202ENST00000535906 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.48
VPS33B-202ENST00000535906 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.48
VPS33B-202ENST00000535906 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.48
VPS33B-202ENST00000535906 YEATS2Q9ULM3 1422 aa18.02■□□□□ 0.48
VPS33B-202ENST00000535906 CAMSAP1Q5T5Y3 1602 aa18.02■□□□□ 0.48
VPS33B-202ENST00000535906 GLI2P10070 1586 aa18.02■□□□□ 0.47
VPS33B-202ENST00000535906 SIGLEC1Q9BZZ2 1709 aa18.01■□□□□ 0.47
VPS33B-202ENST00000535906 NUDCQ9Y266 331 aa18.01■□□□□ 0.47
VPS33B-202ENST00000535906 SYNMO15061 1565 aa18■□□□□ 0.47
VPS33B-202ENST00000535906 PPLO60437 1756 aa18■□□□□ 0.47
VPS33B-202ENST00000535906 KNSTRNQ9Y448 316 aa17.99■□□□□ 0.47
VPS33B-202ENST00000535906 MYOM1P52179 1685 aa17.99■□□□□ 0.47
VPS33B-202ENST00000535906 RBM19Q9Y4C8 960 aaKnown RBP17.98■□□□□ 0.47
VPS33B-202ENST00000535906 FAM69CQ0P6D2 419 aa17.98■□□□□ 0.47
VPS33B-202ENST00000535906 AMER1Q5JTC6 1135 aaPredicted RBP17.97■□□□□ 0.47
VPS33B-202ENST00000535906 PPP4R2Q9NY27 417 aa17.97■□□□□ 0.47
VPS33B-202ENST00000535906 PIK3C2GO75747 1445 aa17.97■□□□□ 0.47
VPS33B-202ENST00000535906 ERVK-7P63135 1459 aa17.97■□□□□ 0.47
VPS33B-202ENST00000535906 KDM5AP29375 1690 aaKnown RBP17.96■□□□□ 0.47
VPS33B-202ENST00000535906 SETBP1Q9Y6X0 1596 aa17.95■□□□□ 0.46
VPS33B-202ENST00000535906 C14orf93Q9H972 538 aaKnown RBP17.95■□□□□ 0.46
VPS33B-202ENST00000535906 PIK3C2BO00750 1634 aa17.95■□□□□ 0.46
VPS33B-202ENST00000535906 RPGRIP1LQ68CZ1 1315 aa17.95■□□□□ 0.46
VPS33B-202ENST00000535906 ARHGAP31Q2M1Z3 1444 aa17.94■□□□□ 0.46
VPS33B-202ENST00000535906 DIP2BQ9P265 1576 aa17.94■□□□□ 0.46
VPS33B-202ENST00000535906 SLC24A1O60721 1099 aa17.94■□□□□ 0.46
VPS33B-202ENST00000535906 MYO3AQ8NEV4 1616 aa17.94■□□□□ 0.46
VPS33B-202ENST00000535906 ZC3H13Q5T200 1668 aaKnown RBP17.93■□□□□ 0.46
VPS33B-202ENST00000535906 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
VPS33B-202ENST00000535906 ASXL1Q8IXJ9 1541 aa17.92■□□□□ 0.46
VPS33B-202ENST00000535906 ADGRB1O14514 1584 aa17.92■□□□□ 0.46
VPS33B-202ENST00000535906 TMEM132EQ6IEE7 984 aa17.92■□□□□ 0.46
VPS33B-202ENST00000535906 TRAK1Q9UPV9 953 aa17.92■□□□□ 0.46
VPS33B-202ENST00000535906 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
VPS33B-202ENST00000535906 NUTM2DQ5VT03 806 aaPredicted RBP17.91■□□□□ 0.46
VPS33B-202ENST00000535906 SBNO2Q9Y2G9 1366 aa17.91■□□□□ 0.46
VPS33B-202ENST00000535906 RNF123Q5XPI4 1314 aa17.91■□□□□ 0.46
VPS33B-202ENST00000535906 CENPJQ9HC77 1338 aaPredicted RBP17.91■□□□□ 0.46
VPS33B-202ENST00000535906 TSPOAP1O95153 1857 aa17.91■□□□□ 0.46
VPS33B-202ENST00000535906 IDI1Q13907 227 aa17.91■□□□□ 0.46
VPS33B-202ENST00000535906 ZMYM4Q5VZL5 1548 aa17.9■□□□□ 0.46
VPS33B-202ENST00000535906 NEXMIFQ5QGS0 1516 aa17.89■□□□□ 0.45
VPS33B-202ENST00000535906 BLMP54132 1417 aaPredicted RBP17.89■□□□□ 0.45
VPS33B-202ENST00000535906 INSRP06213 1382 aa17.88■□□□□ 0.45
VPS33B-202ENST00000535906 NPC1L1Q9UHC9 1359 aa17.88■□□□□ 0.45
VPS33B-202ENST00000535906 VGFO15240 615 aaPredicted RBP17.87■□□□□ 0.45
VPS33B-202ENST00000535906 CARD14Q9BXL6 1004 aa17.87■□□□□ 0.45
VPS33B-202ENST00000535906 ADAMTS8Q9UP79 889 aa17.87■□□□□ 0.45
VPS33B-202ENST00000535906 SLC52A1Q9NWF4 448 aa17.86■□□□□ 0.45
VPS33B-202ENST00000535906 ANP32EQ9BTT0 268 aa17.86■□□□□ 0.45
VPS33B-202ENST00000535906 QRICH2Q9H0J4 1663 aa17.85■□□□□ 0.45
VPS33B-202ENST00000535906 B4GALNT3Q6L9W6 998 aa17.85■□□□□ 0.45
VPS33B-202ENST00000535906 PREX1Q8TCU6 1659 aa17.85■□□□□ 0.45
VPS33B-202ENST00000535906 PDE3BQ13370 1112 aa17.84■□□□□ 0.45
VPS33B-202ENST00000535906 MYO5BQ9ULV0 1848 aa17.83■□□□□ 0.44
VPS33B-202ENST00000535906 FBXO31Q5XUX0 539 aaPredicted RBP17.83■□□□□ 0.44
VPS33B-202ENST00000535906 CDCA7LQ96GN5 454 aa17.83■□□□□ 0.44
VPS33B-202ENST00000535906 TMEM131LA2VDJ0 1609 aa17.81■□□□□ 0.44
VPS33B-202ENST00000535906 WDR43Q15061 677 aaKnown RBP eCLIP17.8■□□□□ 0.44
VPS33B-202ENST00000535906 SLC12A5Q9H2X9 1139 aa17.8■□□□□ 0.44
VPS33B-202ENST00000535906 SENP3Q9H4L4 574 aaPredicted RBP17.8■□□□□ 0.44
VPS33B-202ENST00000535906 ZFYVE9O95405 1425 aa17.8■□□□□ 0.44
VPS33B-202ENST00000535906 ARHGEF28Q8N1W1 1705 aaKnown RBP17.79■□□□□ 0.44
VPS33B-202ENST00000535906 RCAN3Q9UKA8 241 aa17.78■□□□□ 0.44
VPS33B-202ENST00000535906 REREQ9P2R6 1566 aa17.78■□□□□ 0.44
VPS33B-202ENST00000535906 AGLP35573 1532 aa17.76■□□□□ 0.43
VPS33B-202ENST00000535906 FANCIQ9NVI1 1328 aa17.76■□□□□ 0.43
VPS33B-202ENST00000535906 NSD3Q9BZ95 1437 aa17.75■□□□□ 0.43
VPS33B-202ENST00000535906 RRP1P56182 461 aaKnown RBP17.75■□□□□ 0.43
VPS33B-202ENST00000535906 TULP4Q9NRJ4 1543 aa17.74■□□□□ 0.43
VPS33B-202ENST00000535906 SAFB2Q14151 953 aaKnown RBP eCLIP17.73■□□□□ 0.43
VPS33B-202ENST00000535906 STK26Q9P289 416 aa17.73■□□□□ 0.43
VPS33B-202ENST00000535906 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
VPS33B-202ENST00000535906 EVC2Q86UK5 1308 aa17.73■□□□□ 0.43
VPS33B-202ENST00000535906 PLEKHH1Q9ULM0 1364 aa17.73■□□□□ 0.43
VPS33B-202ENST00000535906 CLTCQ00610 1675 aaKnown RBP17.73■□□□□ 0.43
VPS33B-202ENST00000535906 KIF13AQ9H1H9 1805 aa17.72■□□□□ 0.43
VPS33B-202ENST00000535906 MLECQ14165 292 aa17.71■□□□□ 0.43
VPS33B-202ENST00000535906 PUS7Q96PZ0 661 aaKnown RBP17.71■□□□□ 0.43
VPS33B-202ENST00000535906 CCDC146Q8IYE0 955 aa17.7■□□□□ 0.42
VPS33B-202ENST00000535906 CCDC136Q96JN2 1154 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms