RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TTC5Q8N0Z6 440 aa15.52■□□□□ 0.07
SPG11-203ENST00000535302 GOLGA6L19H0YKK7 550 aa15.52■□□□□ 0.07
SPG11-203ENST00000535302 SETQ01105 290 aaPredicted RBP15.52■□□□□ 0.07
SPG11-203ENST00000535302 SMARCA2P51531 1590 aa15.51■□□□□ 0.07
SPG11-203ENST00000535302 CGNL1Q0VF96 1302 aa15.51■□□□□ 0.07
SPG11-203ENST00000535302 CCDC34Q96HJ3 373 aa15.51■□□□□ 0.07
SPG11-203ENST00000535302 C9orf78Q9NZ63 289 aaPredicted RBP15.51■□□□□ 0.07
SPG11-203ENST00000535302 MEX3CQ5U5Q3 659 aaKnown RBP15.5■□□□□ 0.07
SPG11-203ENST00000535302 CWC22Q9HCG8 908 aaKnown RBP15.5■□□□□ 0.07
SPG11-203ENST00000535302 EVC2Q86UK5 1308 aa15.5■□□□□ 0.07
SPG11-203ENST00000535302 PHF23Q9BUL5 403 aaPredicted RBP15.5■□□□□ 0.07
SPG11-203ENST00000535302 ZKSCAN2Q63HK3 967 aa15.49■□□□□ 0.07
SPG11-203ENST00000535302 PSME1Q06323 249 aa15.49■□□□□ 0.07
SPG11-203ENST00000535302 HSP90AA2PQ14568 343 aaPredicted RBP15.49■□□□□ 0.07
SPG11-203ENST00000535302 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.49■□□□□ 0.071e-8■■■■■ 115.4
SPG11-203ENST00000535302 CSPP1Q1MSJ5 1256 aa15.49■□□□□ 0.07
SPG11-203ENST00000535302 VSIG10Q8N0Z9 540 aa15.49■□□□□ 0.07
SPG11-203ENST00000535302 RIPK4P57078 832 aa15.49■□□□□ 0.07
SPG11-203ENST00000535302 NAP1L1P55209 391 aaKnown RBP15.49■□□□□ 0.07
SPG11-203ENST00000535302 BECN2A8MW95 431 aa15.48■□□□□ 0.07
SPG11-203ENST00000535302 RRP1P56182 461 aaKnown RBP15.48■□□□□ 0.07
SPG11-203ENST00000535302 PDE4AP27815 886 aa15.48■□□□□ 0.07
SPG11-203ENST00000535302 ANO2Q9NQ90 1003 aa15.48■□□□□ 0.07
SPG11-203ENST00000535302 USP47Q96K76 1375 aa15.48■□□□□ 0.07
SPG11-203ENST00000535302 TTLL5Q6EMB2 1281 aa15.48■□□□□ 0.07
SPG11-203ENST00000535302 DIAPH3Q9NSV4 1193 aa15.48■□□□□ 0.07
SPG11-203ENST00000535302 HDAC5Q9UQL6 1122 aa15.48■□□□□ 0.07
SPG11-203ENST00000535302 AIMP1Q12904 312 aaKnown RBP15.47■□□□□ 0.07
SPG11-203ENST00000535302 DDX49Q9Y6V7 483 aaKnown RBP15.47■□□□□ 0.07
SPG11-203ENST00000535302 CHMP4AQ9BY43 222 aa15.47■□□□□ 0.07
SPG11-203ENST00000535302 DHX57Q6P158 1386 aaKnown RBP15.46■□□□□ 0.06
SPG11-203ENST00000535302 ZNF644Q9H582 1327 aaPredicted RBP15.45■□□□□ 0.06
SPG11-203ENST00000535302 DIAPH1O60610 1272 aaKnown RBP15.45■□□□□ 0.06
SPG11-203ENST00000535302 PDE3BQ13370 1112 aa15.45■□□□□ 0.06
SPG11-203ENST00000535302 VGFO15240 615 aaPredicted RBP15.45■□□□□ 0.06
SPG11-203ENST00000535302 TPM2P07951 284 aa15.45■□□□□ 0.06
SPG11-203ENST00000535302 PRKRIP1Q9H875 184 aaPredicted RBP15.45■□□□□ 0.06
SPG11-203ENST00000535302 VPS37DQ86XT2 251 aa15.45■□□□□ 0.06
SPG11-203ENST00000535302 E9PSI1 815 aa15.45■□□□□ 0.06
SPG11-203ENST00000535302 ZFYVE27Q5T4F4 411 aa15.44■□□□□ 0.06
SPG11-203ENST00000535302 CENPQQ7L2Z9 268 aaPredicted RBP15.44■□□□□ 0.06
SPG11-203ENST00000535302 CABP2Q9NPB3 220 aa15.44■□□□□ 0.06
SPG11-203ENST00000535302 FKBP5Q13451 457 aaPredicted RBP15.44■□□□□ 0.06
SPG11-203ENST00000535302 PHF14O94880 888 aa15.44■□□□□ 0.06
SPG11-203ENST00000535302 FAM161AQ3B820 660 aa15.44■□□□□ 0.06
SPG11-203ENST00000535302 IFIT2P09913 472 aaKnown RBP15.43■□□□□ 0.06
SPG11-203ENST00000535302 NEXNQ0ZGT2 675 aa15.43■□□□□ 0.06
SPG11-203ENST00000535302 FAM177BA6PVY3 158 aa15.43■□□□□ 0.06
SPG11-203ENST00000535302 TMEM132EQ6IEE7 984 aa15.43■□□□□ 0.06
SPG11-203ENST00000535302 HOMER1Q86YM7 354 aa15.43■□□□□ 0.06
SPG11-203ENST00000535302 GGNBP2Q9H3C7 697 aa15.43■□□□□ 0.06
SPG11-203ENST00000535302 CADPSQ9ULU8 1353 aa15.43■□□□□ 0.06
SPG11-203ENST00000535302 SYNE3Q6ZMZ3 975 aa15.42■□□□□ 0.06
SPG11-203ENST00000535302 NFXL1Q6ZNB6 911 aa15.42■□□□□ 0.06
SPG11-203ENST00000535302 FAM13BQ9NYF5 915 aa15.42■□□□□ 0.06
SPG11-203ENST00000535302 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
SPG11-203ENST00000535302 PHLDB1Q86UU1 1377 aa15.42■□□□□ 0.06
SPG11-203ENST00000535302 PTPRGP23470 1445 aa15.42■□□□□ 0.06
SPG11-203ENST00000535302 USP35Q9P2H5 1018 aa15.42■□□□□ 0.06
SPG11-203ENST00000535302 RSPH4AQ5TD94 716 aa15.42■□□□□ 0.06
SPG11-203ENST00000535302 STK11IPQ8N1F8 1099 aa15.42■□□□□ 0.06
SPG11-203ENST00000535302 TSPYL4Q9UJ04 414 aa15.41■□□□□ 0.06
SPG11-203ENST00000535302 NOL10Q9BSC4 688 aaKnown RBP15.4■□□□□ 0.06
SPG11-203ENST00000535302 TPM1P09493 284 aa15.4■□□□□ 0.06
SPG11-203ENST00000535302 FAM69CQ0P6D2 419 aa15.4■□□□□ 0.06
SPG11-203ENST00000535302 TRIM29Q14134 588 aa15.39■□□□□ 0.05
SPG11-203ENST00000535302 RRP12Q5JTH9 1297 aaKnown RBP15.39■□□□□ 0.05
SPG11-203ENST00000535302 BICD2Q8TD16 824 aa15.39■□□□□ 0.05
SPG11-203ENST00000535302 CCDC43Q96MW1 224 aaKnown RBP15.39■□□□□ 0.05
SPG11-203ENST00000535302 NEUROD6Q96NK8 337 aa15.39■□□□□ 0.05
SPG11-203ENST00000535302 CCDC27Q2M243 656 aa15.38■□□□□ 0.05
SPG11-203ENST00000535302 PANK1Q8TE04 598 aa15.38■□□□□ 0.05
SPG11-203ENST00000535302 PPP1R1BQ9UD71 204 aaPredicted RBP15.38■□□□□ 0.05
SPG11-203ENST00000535302 LNPKQ9C0E8 428 aa15.38■□□□□ 0.05
SPG11-203ENST00000535302 DDX11L8A8MPP1 907 aa15.38■□□□□ 0.05
SPG11-203ENST00000535302 DZIP1LQ8IYY4 767 aaKnown RBP15.38■□□□□ 0.05
SPG11-203ENST00000535302 KIF3AQ9Y496 699 aa15.38■□□□□ 0.05
SPG11-203ENST00000535302 UACAQ9BZF9 1416 aa15.37■□□□□ 0.05
SPG11-203ENST00000535302 CT47A1Q5JQC4 288 aaPredicted RBP15.37■□□□□ 0.05
SPG11-203ENST00000535302 CCDC70Q6NSX1 233 aa15.37■□□□□ 0.05
SPG11-203ENST00000535302 VPS37CA5D8V6 355 aaPredicted RBP15.37■□□□□ 0.05
SPG11-203ENST00000535302 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.37■□□□□ 0.05
SPG11-203ENST00000535302 IBSPP21815 317 aaPredicted RBP15.37■□□□□ 0.05
SPG11-203ENST00000535302 NLRP2Q9NX02 1062 aa15.36■□□□□ 0.05
SPG11-203ENST00000535302 G3BP1Q13283 466 aaKnown RBP eCLIP15.36■□□□□ 0.05
SPG11-203ENST00000535302 PLCD4Q9BRC7 762 aa15.36■□□□□ 0.05
SPG11-203ENST00000535302 CALRP27797 417 aaKnown RBP15.36■□□□□ 0.05
SPG11-203ENST00000535302 ODF2Q5BJF6 829 aa15.36■□□□□ 0.05
SPG11-203ENST00000535302 CHMP4CQ96CF2 233 aa15.36■□□□□ 0.05
SPG11-203ENST00000535302 PDILTQ8N807 584 aa15.35■□□□□ 0.05
SPG11-203ENST00000535302 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
SPG11-203ENST00000535302 CPLX1O14810 134 aa15.35■□□□□ 0.05
SPG11-203ENST00000535302 RIC3Q7Z5B4 369 aa15.35■□□□□ 0.05
SPG11-203ENST00000535302 AMOTL1Q8IY63 956 aa15.35■□□□□ 0.05
SPG11-203ENST00000535302 FANCD2Q9BXW9 1451 aa15.35■□□□□ 0.05
SPG11-203ENST00000535302 DDX19BQ9UMR2 479 aa15.34■□□□□ 0.05
SPG11-203ENST00000535302 HSP90AB2PQ58FF8 381 aa15.34■□□□□ 0.05
SPG11-203ENST00000535302 AEBP2Q6ZN18 517 aaPredicted RBP15.34■□□□□ 0.05
SPG11-203ENST00000535302 IKQ13123 557 aaPredicted RBP15.33■□□□□ 0.05
SPG11-203ENST00000535302 PAF1Q8N7H5 531 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms