RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 MYO5BQ9ULV0 1848 aa15.76■□□□□ 0.11
CSDE1-217ENST00000534699 LTKP29376 864 aa15.76■□□□□ 0.11
CSDE1-217ENST00000534699 CHD2O14647 1828 aaKnown RBP15.75■□□□□ 0.11
CSDE1-217ENST00000534699 NAIPQ13075 1403 aa15.75■□□□□ 0.11
CSDE1-217ENST00000534699 UBAP1LF5GYI3 381 aa15.75■□□□□ 0.11
CSDE1-217ENST00000534699 RIMS2Q9UQ26 1411 aa15.75■□□□□ 0.11
CSDE1-217ENST00000534699 KCNA6P17658 529 aa15.74■□□□□ 0.11
CSDE1-217ENST00000534699 TRPM2O94759 1503 aa15.74■□□□□ 0.11
CSDE1-217ENST00000534699 XIRP1Q702N8 1843 aaKnown RBP15.73■□□□□ 0.11
CSDE1-217ENST00000534699 KIF1BO60333 1816 aa15.72■□□□□ 0.11
CSDE1-217ENST00000534699 TBX22Q9Y458 520 aa15.72■□□□□ 0.11
CSDE1-217ENST00000534699 SETBP1Q9Y6X0 1596 aa15.69■□□□□ 0.1
CSDE1-217ENST00000534699 ALKQ9UM73 1620 aa15.69■□□□□ 0.1
CSDE1-217ENST00000534699 FAM135BQ49AJ0 1406 aa15.66■□□□□ 0.1
CSDE1-217ENST00000534699 RPGRIP1LQ68CZ1 1315 aa15.65■□□□□ 0.1
CSDE1-217ENST00000534699 CLTCL1P53675 1640 aa15.64■□□□□ 0.09
CSDE1-217ENST00000534699 PPP1R15AO75807 674 aaPredicted RBP15.63■□□□□ 0.09
CSDE1-217ENST00000534699 ADAMTS13Q76LX8 1427 aa15.63■□□□□ 0.09
CSDE1-217ENST00000534699 PRAG1Q86YV5 1406 aa15.62■□□□□ 0.09
CSDE1-217ENST00000534699 XRN1Q8IZH2 1706 aaKnown RBP15.61■□□□□ 0.09
CSDE1-217ENST00000534699 ITGAEP38570 1179 aa15.61■□□□□ 0.09
CSDE1-217ENST00000534699 NEXMIFQ5QGS0 1516 aa15.61■□□□□ 0.09
CSDE1-217ENST00000534699 DCCP43146 1447 aa15.6■□□□□ 0.09
CSDE1-217ENST00000534699 MSH6P52701 1360 aa15.6■□□□□ 0.09
CSDE1-217ENST00000534699 NRXN3Q9Y4C0 1643 aa15.59■□□□□ 0.09
CSDE1-217ENST00000534699 TMEM94Q12767 1356 aa15.59■□□□□ 0.09
CSDE1-217ENST00000534699 PROSER2Q86WR7 435 aaPredicted RBP15.59■□□□□ 0.09
CSDE1-217ENST00000534699 PPLO60437 1756 aa15.57■□□□□ 0.08
CSDE1-217ENST00000534699 HRCP23327 699 aa15.57■□□□□ 0.08
CSDE1-217ENST00000534699 VGFO15240 615 aaPredicted RBP15.55■□□□□ 0.08
CSDE1-217ENST00000534699 CHGAP10645 457 aaKnown RBP15.55■□□□□ 0.08
CSDE1-217ENST00000534699 BCANQ96GW7 911 aa15.55■□□□□ 0.08
CSDE1-217ENST00000534699 SLC26A8Q96RN1 970 aa15.55■□□□□ 0.08
CSDE1-217ENST00000534699 MED1Q15648 1581 aaPredicted RBP15.55■□□□□ 0.08
CSDE1-217ENST00000534699 DISP3Q9P2K9 1392 aa15.54■□□□□ 0.08
CSDE1-217ENST00000534699 HSPA1LP34931 641 aa15.54■□□□□ 0.08
CSDE1-217ENST00000534699 SETD1AO15047 1707 aaKnown RBP15.53■□□□□ 0.08
CSDE1-217ENST00000534699 IFT172Q9UG01 1749 aa15.53■□□□□ 0.08
CSDE1-217ENST00000534699 PPARGC1BQ86YN6 1023 aaKnown RBP15.53■□□□□ 0.08
CSDE1-217ENST00000534699 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
CSDE1-217ENST00000534699 ROBO1Q9Y6N7 1651 aa15.53■□□□□ 0.08
CSDE1-217ENST00000534699 SETD5Q9C0A6 1442 aa15.53■□□□□ 0.08
CSDE1-217ENST00000534699 TRIM52Q96A61 297 aa15.52■□□□□ 0.08
CSDE1-217ENST00000534699 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.52■□□□□ 0.08
CSDE1-217ENST00000534699 PIP4K2BP78356 416 aa15.52■□□□□ 0.07
CSDE1-217ENST00000534699 PTCH1Q13635 1447 aa15.51■□□□□ 0.07
CSDE1-217ENST00000534699 CADPS2Q86UW7 1296 aa15.51■□□□□ 0.07
CSDE1-217ENST00000534699 AHDC1Q5TGY3 1603 aaPredicted RBP15.51■□□□□ 0.07
CSDE1-217ENST00000534699 ANKRD30BQ9BXX2 1392 aa15.51■□□□□ 0.07
CSDE1-217ENST00000534699 C19orf44Q9H6X5 657 aa15.51■□□□□ 0.07
CSDE1-217ENST00000534699 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
CSDE1-217ENST00000534699 ZNF326Q5BKZ1 582 aaKnown RBP15.49■□□□□ 0.07
CSDE1-217ENST00000534699 CCDC144AA2RUR9 1427 aa15.49■□□□□ 0.07
CSDE1-217ENST00000534699 LAMC1P11047 1609 aa15.48■□□□□ 0.07
CSDE1-217ENST00000534699 STAC3Q96MF2 364 aa15.48■□□□□ 0.07
CSDE1-217ENST00000534699 PHLPP1O60346 1717 aa15.48■□□□□ 0.07
CSDE1-217ENST00000534699 KNDC1Q76NI1 1749 aa15.48■□□□□ 0.07
CSDE1-217ENST00000534699 PTPRUQ92729 1446 aa15.48■□□□□ 0.07
CSDE1-217ENST00000534699 AMOTL2Q9Y2J4 779 aa15.47■□□□□ 0.07
CSDE1-217ENST00000534699 SPATA31E1Q6ZUB1 1445 aa15.47■□□□□ 0.07
CSDE1-217ENST00000534699 MPHOSPH9Q99550 1183 aa15.46■□□□□ 0.07
CSDE1-217ENST00000534699 SLAIN2Q9P270 581 aa15.46■□□□□ 0.07
CSDE1-217ENST00000534699 ADGRL3Q9HAR2 1447 aa15.46■□□□□ 0.06
CSDE1-217ENST00000534699 SHPRHQ149N8 1683 aa15.45■□□□□ 0.06
CSDE1-217ENST00000534699 ATF3P18847 181 aa15.44■□□□□ 0.06
CSDE1-217ENST00000534699 MYOM2P54296 1465 aa15.44■□□□□ 0.06
CSDE1-217ENST00000534699 COL16A1Q07092 1604 aaPredicted RBP15.43■□□□□ 0.06
CSDE1-217ENST00000534699 NHSL1Q5SYE7 1610 aa15.43■□□□□ 0.06
CSDE1-217ENST00000534699 TECPR2O15040 1411 aa15.43■□□□□ 0.06
CSDE1-217ENST00000534699 SIRT1Q96EB6 747 aa15.42■□□□□ 0.06
CSDE1-217ENST00000534699 JCADQ9P266 1359 aa15.42■□□□□ 0.06
CSDE1-217ENST00000534699 SOCS7O14512 581 aa15.41■□□□□ 0.06
CSDE1-217ENST00000534699 METP08581 1390 aa15.41■□□□□ 0.06
CSDE1-217ENST00000534699 NRXN1Q9ULB1 1477 aa15.41■□□□□ 0.06
CSDE1-217ENST00000534699 NALCNQ8IZF0 1738 aa15.4■□□□□ 0.06
CSDE1-217ENST00000534699 SPATA31A6Q5VVP1 1343 aa15.4■□□□□ 0.06
CSDE1-217ENST00000534699 CDC42BPGQ6DT37 1551 aa15.39■□□□□ 0.05
CSDE1-217ENST00000534699 MST1RQ04912 1400 aa15.39■□□□□ 0.05
CSDE1-217ENST00000534699 C14orf37Q86TY3 774 aa15.38■□□□□ 0.05
CSDE1-217ENST00000534699 PIK3C2GO75747 1445 aa15.37■□□□□ 0.05
CSDE1-217ENST00000534699 LRPPRCP42704 1394 aaKnown RBP15.37■□□□□ 0.05
CSDE1-217ENST00000534699 RAB3GAP2Q9H2M9 1393 aa15.37■□□□□ 0.05
CSDE1-217ENST00000534699 ASXL1Q8IXJ9 1541 aa15.37■□□□□ 0.05
CSDE1-217ENST00000534699 ABCC11Q96J66 1382 aa15.37■□□□□ 0.05
CSDE1-217ENST00000534699 NUTM2DQ5VT03 806 aaPredicted RBP15.35■□□□□ 0.05
CSDE1-217ENST00000534699 DLC1Q96QB1 1528 aa15.35■□□□□ 0.05
CSDE1-217ENST00000534699 PHF23Q9BUL5 403 aaPredicted RBP15.34■□□□□ 0.05
CSDE1-217ENST00000534699 ILDR2Q71H61 639 aa15.32■□□□□ 0.04
CSDE1-217ENST00000534699 KIF1AQ12756 1690 aa15.31■□□□□ 0.04
CSDE1-217ENST00000534699 C1orf167Q5SNV9 1468 aa15.31■□□□□ 0.04
CSDE1-217ENST00000534699 BRINP3Q76B58 766 aa15.3■□□□□ 0.04
CSDE1-217ENST00000534699 C14orf93Q9H972 538 aaKnown RBP15.3■□□□□ 0.04
CSDE1-217ENST00000534699 ROBO2Q9HCK4 1378 aa15.3■□□□□ 0.04
CSDE1-217ENST00000534699 KIAA1210Q9ULL0 1709 aa15.3■□□□□ 0.04
CSDE1-217ENST00000534699 DHX57Q6P158 1386 aaKnown RBP15.3■□□□□ 0.04
CSDE1-217ENST00000534699 FMN2Q9NZ56 1722 aa15.29■□□□□ 0.04
CSDE1-217ENST00000534699 COL22A1Q8NFW1 1626 aaPredicted RBP15.29■□□□□ 0.04
CSDE1-217ENST00000534699 LRRC59Q96AG4 307 aaKnown RBP15.29■□□□□ 0.04
CSDE1-217ENST00000534699 YTHDC2Q9H6S0 1430 aaKnown RBP15.28■□□□□ 0.04
CSDE1-217ENST00000534699 ADGRF5Q8IZF2 1346 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms