RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 RIMS2Q9UQ26 1411 aa16.46■□□□□ 0.23
SDHD-208ENST00000534010 CLTCL1P53675 1640 aa16.45■□□□□ 0.22
SDHD-208ENST00000534010 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
SDHD-208ENST00000534010 ADAMTS13Q76LX8 1427 aa16.44■□□□□ 0.22
SDHD-208ENST00000534010 DIP2AQ14689 1571 aa16.43■□□□□ 0.22
SDHD-208ENST00000534010 NKTRP30414 1462 aaKnown RBP16.43■□□□□ 0.22
SDHD-208ENST00000534010 STAG3Q9UJ98 1225 aa16.41■□□□□ 0.22
SDHD-208ENST00000534010 SETBP1Q9Y6X0 1596 aa16.41■□□□□ 0.22
SDHD-208ENST00000534010 NEXMIFQ5QGS0 1516 aa16.4■□□□□ 0.22
SDHD-208ENST00000534010 UBAP1LF5GYI3 381 aa16.4■□□□□ 0.22
SDHD-208ENST00000534010 KCNA6P17658 529 aa16.4■□□□□ 0.22
SDHD-208ENST00000534010 KIF1BO60333 1816 aa16.39■□□□□ 0.21
SDHD-208ENST00000534010 TBX22Q9Y458 520 aa16.38■□□□□ 0.21
SDHD-208ENST00000534010 PIK3R4Q99570 1358 aa16.38■□□□□ 0.21
SDHD-208ENST00000534010 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.37■□□□□ 0.21
SDHD-208ENST00000534010 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
SDHD-208ENST00000534010 SLC26A8Q96RN1 970 aa16.36■□□□□ 0.21
SDHD-208ENST00000534010 XRN1Q8IZH2 1706 aaKnown RBP16.36■□□□□ 0.21
SDHD-208ENST00000534010 TOM1O60784 492 aa16.35■□□□□ 0.21
SDHD-208ENST00000534010 HDGFP51858 240 aaKnown RBP16.34■□□□□ 0.21
SDHD-208ENST00000534010 TMEM94Q12767 1356 aa16.34■□□□□ 0.21
SDHD-208ENST00000534010 NCOA3Q9Y6Q9 1424 aa16.34■□□□□ 0.21
SDHD-208ENST00000534010 PTPRUQ92729 1446 aa16.33■□□□□ 0.2
SDHD-208ENST00000534010 PPLO60437 1756 aa16.33■□□□□ 0.2
SDHD-208ENST00000534010 PRAG1Q86YV5 1406 aa16.31■□□□□ 0.2
SDHD-208ENST00000534010 IFT172Q9UG01 1749 aa16.31■□□□□ 0.2
SDHD-208ENST00000534010 FAM135BQ49AJ0 1406 aa16.3■□□□□ 0.2
SDHD-208ENST00000534010 SPATA31E1Q6ZUB1 1445 aa16.29■□□□□ 0.2
SDHD-208ENST00000534010 SETD5Q9C0A6 1442 aa16.29■□□□□ 0.2
SDHD-208ENST00000534010 ACIN1Q9UKV3 1341 aaKnown RBP16.29■□□□□ 0.2
SDHD-208ENST00000534010 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
SDHD-208ENST00000534010 HSPA1LP34931 641 aa16.27■□□□□ 0.2
SDHD-208ENST00000534010 CHGAP10645 457 aaKnown RBP16.26■□□□□ 0.19
SDHD-208ENST00000534010 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.25■□□□□ 0.19
SDHD-208ENST00000534010 RPGRIP1LQ68CZ1 1315 aa16.25■□□□□ 0.19
SDHD-208ENST00000534010 ROBO1Q9Y6N7 1651 aa16.25■□□□□ 0.19
SDHD-208ENST00000534010 PPP1R15AO75807 674 aaPredicted RBP16.25■□□□□ 0.19
SDHD-208ENST00000534010 NUTM2DQ5VT03 806 aaPredicted RBP16.25■□□□□ 0.19
SDHD-208ENST00000534010 TRIM52Q96A61 297 aa16.25■□□□□ 0.19
SDHD-208ENST00000534010 MPHOSPH9Q99550 1183 aa16.25■□□□□ 0.19
SDHD-208ENST00000534010 METP08581 1390 aa16.25■□□□□ 0.19
SDHD-208ENST00000534010 PROSER2Q86WR7 435 aaPredicted RBP16.24■□□□□ 0.19
SDHD-208ENST00000534010 RAB3GAP2Q9H2M9 1393 aa16.24■□□□□ 0.19
SDHD-208ENST00000534010 PIP4K2BP78356 416 aa16.23■□□□□ 0.19
SDHD-208ENST00000534010 HRCP23327 699 aa16.22■□□□□ 0.19
SDHD-208ENST00000534010 DCCP43146 1447 aa16.21■□□□□ 0.19
SDHD-208ENST00000534010 FOXD1Q16676 465 aa16.21■□□□□ 0.19
SDHD-208ENST00000534010 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.18
SDHD-208ENST00000534010 CCDC144AA2RUR9 1427 aa16.2■□□□□ 0.18
SDHD-208ENST00000534010 MSH6P52701 1360 aa16.2■□□□□ 0.18
SDHD-208ENST00000534010 PTCH1Q13635 1447 aa16.19■□□□□ 0.18
SDHD-208ENST00000534010 NRXN1Q9ULB1 1477 aa16.19■□□□□ 0.18
SDHD-208ENST00000534010 RBM33Q96EV2 1170 aaKnown RBP16.19■□□□□ 0.18
SDHD-208ENST00000534010 AMOTL2Q9Y2J4 779 aa16.19■□□□□ 0.18
SDHD-208ENST00000534010 NALCNQ8IZF0 1738 aa16.18■□□□□ 0.18
SDHD-208ENST00000534010 VGFO15240 615 aaPredicted RBP16.17■□□□□ 0.18
SDHD-208ENST00000534010 ZNF326Q5BKZ1 582 aaKnown RBP16.17■□□□□ 0.18
SDHD-208ENST00000534010 BCANQ96GW7 911 aa16.17■□□□□ 0.18
SDHD-208ENST00000534010 ASXL1Q8IXJ9 1541 aa16.17■□□□□ 0.18
SDHD-208ENST00000534010 C19orf44Q9H6X5 657 aa16.16■□□□□ 0.18
SDHD-208ENST00000534010 COL16A1Q07092 1604 aaPredicted RBP16.16■□□□□ 0.18
SDHD-208ENST00000534010 AHDC1Q5TGY3 1603 aaPredicted RBP16.16■□□□□ 0.18
SDHD-208ENST00000534010 ANKRD30BQ9BXX2 1392 aa16.15■□□□□ 0.18
SDHD-208ENST00000534010 TECPR2O15040 1411 aa16.15■□□□□ 0.18
SDHD-208ENST00000534010 PIK3C2GO75747 1445 aa16.15■□□□□ 0.18
SDHD-208ENST00000534010 SENP3Q9H4L4 574 aaPredicted RBP16.15■□□□□ 0.18
SDHD-208ENST00000534010 ADGRL3Q9HAR2 1447 aa16.15■□□□□ 0.18
SDHD-208ENST00000534010 SLAIN2Q9P270 581 aa16.15■□□□□ 0.18
SDHD-208ENST00000534010 DISP3Q9P2K9 1392 aa16.14■□□□□ 0.17
SDHD-208ENST00000534010 KNDC1Q76NI1 1749 aa16.14■□□□□ 0.17
SDHD-208ENST00000534010 MYOM2P54296 1465 aa16.14■□□□□ 0.17
SDHD-208ENST00000534010 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
SDHD-208ENST00000534010 LAMC1P11047 1609 aa16.13■□□□□ 0.17
SDHD-208ENST00000534010 ILDR2Q71H61 639 aa16.13■□□□□ 0.17
SDHD-208ENST00000534010 ADGRF5Q8IZF2 1346 aa16.13■□□□□ 0.17
SDHD-208ENST00000534010 MST1RQ04912 1400 aa16.12■□□□□ 0.17
SDHD-208ENST00000534010 NHSL1Q5SYE7 1610 aa16.12■□□□□ 0.17
SDHD-208ENST00000534010 ROBO2Q9HCK4 1378 aa16.12■□□□□ 0.17
SDHD-208ENST00000534010 PHLPP1O60346 1717 aa16.11■□□□□ 0.17
SDHD-208ENST00000534010 CADPS2Q86UW7 1296 aa16.11■□□□□ 0.17
SDHD-208ENST00000534010 ABCC11Q96J66 1382 aa16.07■□□□□ 0.16
SDHD-208ENST00000534010 SHPRHQ149N8 1683 aa16.07■□□□□ 0.16
SDHD-208ENST00000534010 CDC42BPGQ6DT37 1551 aa16.06■□□□□ 0.16
SDHD-208ENST00000534010 LRPPRCP42704 1394 aaKnown RBP16.06■□□□□ 0.16
SDHD-208ENST00000534010 BRINP3Q76B58 766 aa16.05■□□□□ 0.16
SDHD-208ENST00000534010 ADGRB1O14514 1584 aa16.04■□□□□ 0.16
SDHD-208ENST00000534010 C14orf93Q9H972 538 aaKnown RBP16.04■□□□□ 0.16
SDHD-208ENST00000534010 C1orf167Q5SNV9 1468 aa16.03■□□□□ 0.16
SDHD-208ENST00000534010 ATF3P18847 181 aa16.03■□□□□ 0.16
SDHD-208ENST00000534010 RGL3Q3MIN7 710 aa16.03■□□□□ 0.16
SDHD-208ENST00000534010 SIRT1Q96EB6 747 aa16.02■□□□□ 0.16
SDHD-208ENST00000534010 RGS17Q9UGC6 210 aaPredicted RBP16.02■□□□□ 0.16
SDHD-208ENST00000534010 YTHDC2Q9H6S0 1430 aaKnown RBP16.02■□□□□ 0.15
SDHD-208ENST00000534010 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
SDHD-208ENST00000534010 JCADQ9P266 1359 aa16.01■□□□□ 0.15
SDHD-208ENST00000534010 DLC1Q96QB1 1528 aa16■□□□□ 0.15
SDHD-208ENST00000534010 LRP6O75581 1613 aa15.99■□□□□ 0.15
SDHD-208ENST00000534010 FMN2Q9NZ56 1722 aa15.99■□□□□ 0.15
SDHD-208ENST00000534010 C14orf37Q86TY3 774 aa15.98■□□□□ 0.15
SDHD-208ENST00000534010 STAC3Q96MF2 364 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms