RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 PKNOX2Q96KN3 472 aa5□□□□□ -1.61
SOX6-217ENST00000533870 MAPKBP1O60336 1514 aa5□□□□□ -1.61
SOX6-217ENST00000533870 VSIG10Q8N0Z9 540 aa5□□□□□ -1.61
SOX6-217ENST00000533870 DDX49Q9Y6V7 483 aaKnown RBP5□□□□□ -1.61
SOX6-217ENST00000533870 PARD3Q8TEW0 1356 aa5□□□□□ -1.61
SOX6-217ENST00000533870 DNTTIP2Q5QJE6 756 aaKnown RBP5□□□□□ -1.61
SOX6-217ENST00000533870 FRAT1Q92837 279 aaPredicted RBP5□□□□□ -1.61
SOX6-217ENST00000533870 NSD2O96028 1365 aa5□□□□□ -1.61
SOX6-217ENST00000533870 PAK3O75914 559 aaPredicted RBP5□□□□□ -1.61
SOX6-217ENST00000533870 RUNDC1Q96C34 613 aa5□□□□□ -1.61
SOX6-217ENST00000533870 CRBNQ96SW2 442 aa5□□□□□ -1.61
SOX6-217ENST00000533870 C22orf23Q9BZE7 217 aa5□□□□□ -1.61
SOX6-217ENST00000533870 UHRF1BP1Q6BDS2 1440 aa5□□□□□ -1.61
SOX6-217ENST00000533870 SYNJ1O43426 1573 aa4.99□□□□□ -1.61
SOX6-217ENST00000533870 ERCC6Q03468 1493 aa4.99□□□□□ -1.61
SOX6-217ENST00000533870 FANCD2Q9BXW9 1451 aa4.99□□□□□ -1.61
SOX6-217ENST00000533870 RPGRIP1LQ68CZ1 1315 aa4.99□□□□□ -1.61
SOX6-217ENST00000533870 HDGFP51858 240 aaKnown RBP4.99□□□□□ -1.61
SOX6-217ENST00000533870 DAPK1P53355 1430 aa4.99□□□□□ -1.61
SOX6-217ENST00000533870 CDC45O75419 566 aa4.99□□□□□ -1.61
SOX6-217ENST00000533870 NPM1P06748 294 aaKnown RBP eCLIP4.99□□□□□ -1.61
SOX6-217ENST00000533870 IL16Q14005 1332 aa4.99□□□□□ -1.61
SOX6-217ENST00000533870 TRAK2O60296 914 aa4.99□□□□□ -1.61
SOX6-217ENST00000533870 TDRD9Q8NDG6 1382 aaKnown RBP4.99□□□□□ -1.61
SOX6-217ENST00000533870 WWC1Q8IX03 1113 aa4.99□□□□□ -1.61
SOX6-217ENST00000533870 GOLGA6L4A6NEF3 574 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 RNF20Q5VTR2 975 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 PPP4R3CPQ6ZMV5 832 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 PRIMPOLQ96LW4 560 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 PLEKHH1Q9ULM0 1364 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 CCDC27Q2M243 656 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 SNX21Q969T3 373 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 TEX14Q8IWB6 1497 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 KLHL40Q2TBA0 621 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 KIAA0586Q9BVV6 1533 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 UVSSAQ2YD98 709 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 NBPF8Q3BBV2 869 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 HDGFL2Q7Z4V5 671 aaPredicted RBP4.98□□□□□ -1.61
SOX6-217ENST00000533870 BCL11BQ9C0K0 894 aaPredicted RBP4.98□□□□□ -1.61
SOX6-217ENST00000533870 SALL2Q9Y467 1007 aaPredicted RBP4.98□□□□□ -1.61
SOX6-217ENST00000533870 IBTKQ9P2D0 1353 aaPredicted RBP4.98□□□□□ -1.61
SOX6-217ENST00000533870 PANK3Q9H999 370 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 PIK3C2GO75747 1445 aa4.98□□□□□ -1.61
SOX6-217ENST00000533870 FRAT2O75474 233 aaPredicted RBP4.97□□□□□ -1.61
SOX6-217ENST00000533870 GNAI1P63096 354 aa4.97□□□□□ -1.61
SOX6-217ENST00000533870 SLFN5Q08AF3 891 aa4.97□□□□□ -1.61
SOX6-217ENST00000533870 HSP90AB4PQ58FF6 505 aa4.97□□□□□ -1.61
SOX6-217ENST00000533870 ARHGAP45Q92619 1136 aa4.97□□□□□ -1.61
SOX6-217ENST00000533870 CCDC141Q6ZP82 1450 aa4.97□□□□□ -1.61
SOX6-217ENST00000533870 GPS2Q13227 327 aa4.97□□□□□ -1.61
SOX6-217ENST00000533870 GRPEL1Q9HAV7 217 aa4.97□□□□□ -1.61
SOX6-217ENST00000533870 GAPVD1Q14C86 1478 aa4.97□□□□□ -1.61
SOX6-217ENST00000533870 RALGAPBQ86X10 1494 aa4.97□□□□□ -1.61
SOX6-217ENST00000533870 RPAP2Q8IXW5 612 aaPredicted RBP4.97□□□□□ -1.61
SOX6-217ENST00000533870 A0A0U1RQG5 324 aaPredicted RBP4.97□□□□□ -1.61
SOX6-217ENST00000533870 PPP2R1AP30153 589 aa4.97□□□□□ -1.61
SOX6-217ENST00000533870 CCP110O43303 1012 aa4.97□□□□□ -1.61
SOX6-217ENST00000533870 RBM25P49756 843 aaKnown RBP4.97□□□□□ -1.61
SOX6-217ENST00000533870 SMC4Q9NTJ3 1288 aa4.97□□□□□ -1.61
SOX6-217ENST00000533870 DYNC1I1O14576 645 aa4.96□□□□□ -1.61
SOX6-217ENST00000533870 NASPP49321 788 aaPredicted RBP4.96□□□□□ -1.61
SOX6-217ENST00000533870 PDCP20941 246 aa4.96□□□□□ -1.62
SOX6-217ENST00000533870 INTS3Q68E01 1043 aaKnown RBP4.96□□□□□ -1.62
SOX6-217ENST00000533870 NEMFO60524 1076 aa4.96□□□□□ -1.62
SOX6-217ENST00000533870 VGFO15240 615 aaPredicted RBP4.96□□□□□ -1.62
SOX6-217ENST00000533870 U2AF1L5P0DN76 240 aaPredicted RBP4.96□□□□□ -1.62
SOX6-217ENST00000533870 TPM4P67936 248 aa4.96□□□□□ -1.62
SOX6-217ENST00000533870 U2AF1Q01081 240 aaKnown RBP eCLIP4.96□□□□□ -1.62
SOX6-217ENST00000533870 ARGLU1Q9NWB6 273 aaPredicted RBP4.96□□□□□ -1.62
SOX6-217ENST00000533870 GRIN2BQ13224 1484 aa4.96□□□□□ -1.62
SOX6-217ENST00000533870 KIF20AO95235 890 aa4.96□□□□□ -1.62
SOX6-217ENST00000533870 RGL3Q3MIN7 710 aa4.96□□□□□ -1.62
SOX6-217ENST00000533870 BMP2KLQ5H9B9 411 aa4.96□□□□□ -1.62
SOX6-217ENST00000533870 CC2D1BQ5T0F9 858 aaKnown RBP4.96□□□□□ -1.62
SOX6-217ENST00000533870 HDAC1Q13547 482 aaPredicted RBP4.95□□□□□ -1.62
SOX6-217ENST00000533870 ALDH1L2Q3SY69 923 aa4.95□□□□□ -1.62
SOX6-217ENST00000533870 TBC1D32Q96NH3 1257 aa4.95□□□□□ -1.62
SOX6-217ENST00000533870 BRPF3Q9ULD4 1205 aa4.95□□□□□ -1.62
SOX6-217ENST00000533870 POLR3AO14802 1390 aaPredicted RBP4.95□□□□□ -1.62
SOX6-217ENST00000533870 WDR97A6NE52 1622 aa4.95□□□□□ -1.62
SOX6-217ENST00000533870 APAF1O14727 1248 aa4.95□□□□□ -1.62
SOX6-217ENST00000533870 OFD1O75665 1012 aa4.95□□□□□ -1.62
SOX6-217ENST00000533870 SMC5Q8IY18 1101 aa4.95□□□□□ -1.62
SOX6-217ENST00000533870 SBNO2Q9Y2G9 1366 aa4.95□□□□□ -1.62
SOX6-217ENST00000533870 SHANK2Q9UPX8 1470 aa4.95□□□□□ -1.62
SOX6-217ENST00000533870 EVC2Q86UK5 1308 aa4.95□□□□□ -1.62
SOX6-217ENST00000533870 RUFY2Q8WXA3 655 aa4.95□□□□□ -1.62
SOX6-217ENST00000533870 MFAP1P55081 439 aaKnown RBP4.94□□□□□ -1.62
SOX6-217ENST00000533870 SASS6Q6UVJ0 657 aa4.94□□□□□ -1.62
SOX6-217ENST00000533870 KIAA1211Q6ZU35 1233 aa4.94□□□□□ -1.62
SOX6-217ENST00000533870 ITPRIPQ8IWB1 547 aa4.94□□□□□ -1.62
SOX6-217ENST00000533870 MVPQ14764 893 aaKnown RBP4.94□□□□□ -1.62
SOX6-217ENST00000533870 GOLGA6L1Q8N7Z2 621 aa4.94□□□□□ -1.62
SOX6-217ENST00000533870 SPATA31E1Q6ZUB1 1445 aa4.94□□□□□ -1.62
SOX6-217ENST00000533870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.94□□□□□ -1.62
SOX6-217ENST00000533870 COG6Q9Y2V7 657 aa4.94□□□□□ -1.62
SOX6-217ENST00000533870 PTPRGP23470 1445 aa4.94□□□□□ -1.62
SOX6-217ENST00000533870 SPAG9O60271 1321 aaKnown RBP4.94□□□□□ -1.62
SOX6-217ENST00000533870 ACBD3Q9H3P7 528 aa4.93□□□□□ -1.62
SOX6-217ENST00000533870 K7ELQ4 463 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms