RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
AMBRA1-211ENST00000533727 ZRSR1Q15695 479 aaKnown RBP14.18□□□□□ -0.14
AMBRA1-211ENST00000533727 SMC4Q9NTJ3 1288 aa14.18□□□□□ -0.14
AMBRA1-211ENST00000533727 SENP3-EIF4A1A0A087X0R7 540 aa14.17□□□□□ -0.14
AMBRA1-211ENST00000533727 SMG6Q86US8 1419 aaKnown RBP14.17□□□□□ -0.14
AMBRA1-211ENST00000533727 RWDD1Q9H446 243 aaPredicted RBP14.17□□□□□ -0.14
AMBRA1-211ENST00000533727 CAMSAP2Q08AD1 1489 aa14.16□□□□□ -0.14
AMBRA1-211ENST00000533727 MSH5O43196 834 aa14.16□□□□□ -0.14
AMBRA1-211ENST00000533727 NEXNQ0ZGT2 675 aa14.16□□□□□ -0.14
AMBRA1-211ENST00000533727 NLRP2Q9NX02 1062 aa14.16□□□□□ -0.14
AMBRA1-211ENST00000533727 CFAP70Q5T0N1 1121 aa14.16□□□□□ -0.14
AMBRA1-211ENST00000533727 CHMP3Q9Y3E7 222 aa14.16□□□□□ -0.14
AMBRA1-211ENST00000533727 ASXL2Q76L83 1435 aa14.16□□□□□ -0.14
AMBRA1-211ENST00000533727 ERBINQ96RT1 1412 aa14.16□□□□□ -0.14
AMBRA1-211ENST00000533727 SF3B2Q13435 895 aaKnown RBP14.15□□□□□ -0.14
AMBRA1-211ENST00000533727 TMEM132EQ6IEE7 984 aa14.15□□□□□ -0.14
AMBRA1-211ENST00000533727 WDR97A6NE52 1622 aa14.15□□□□□ -0.14
AMBRA1-211ENST00000533727 ABTB2Q8N961 1025 aa14.15□□□□□ -0.14
AMBRA1-211ENST00000533727 PCF11O94913 1555 aaKnown RBP14.15□□□□□ -0.14
AMBRA1-211ENST00000533727 DDX58O95786 925 aaKnown RBP14.15□□□□□ -0.15
AMBRA1-211ENST00000533727 ITPRIPQ8IWB1 547 aa14.15□□□□□ -0.15
AMBRA1-211ENST00000533727 PRAM1Q96QH2 718 aa14.15□□□□□ -0.15
AMBRA1-211ENST00000533727 KIAA1211Q6ZU35 1233 aa14.14□□□□□ -0.15
AMBRA1-211ENST00000533727 THOC2Q8NI27 1593 aaKnown RBP14.14□□□□□ -0.15
AMBRA1-211ENST00000533727 RCAN3Q9UKA8 241 aa14.13□□□□□ -0.15
AMBRA1-211ENST00000533727 ATAD2Q6PL18 1390 aa14.13□□□□□ -0.15
AMBRA1-211ENST00000533727 WDR7Q9Y4E6 1490 aa14.13□□□□□ -0.15
AMBRA1-211ENST00000533727 RTEL1-TNFRSF6BF6WH68 1400 aa14.12□□□□□ -0.15
AMBRA1-211ENST00000533727 PMFBP1Q8TBY8 1022 aa14.12□□□□□ -0.15
AMBRA1-211ENST00000533727 ADAMTS12P58397 1594 aa14.12□□□□□ -0.15
AMBRA1-211ENST00000533727 L1TD1Q5T7N2 865 aaKnown RBP14.12□□□□□ -0.15
AMBRA1-211ENST00000533727 SYTL4Q96C24 671 aaPredicted RBP14.12□□□□□ -0.15
AMBRA1-211ENST00000533727 CABP2Q9NPB3 220 aa14.12□□□□□ -0.15
AMBRA1-211ENST00000533727 DHX29Q7Z478 1369 aaKnown RBP14.11□□□□□ -0.15
AMBRA1-211ENST00000533727 B4GALNT3Q6L9W6 998 aa14.11□□□□□ -0.15
AMBRA1-211ENST00000533727 HSP90B1P14625 803 aaKnown RBP14.11□□□□□ -0.15
AMBRA1-211ENST00000533727 SLC26A8Q96RN1 970 aa14.11□□□□□ -0.15
AMBRA1-211ENST00000533727 RGS3P49796 1198 aa14.1□□□□□ -0.15
AMBRA1-211ENST00000533727 PLCH2O75038 1416 aa14.1□□□□□ -0.15
AMBRA1-211ENST00000533727 E9PSI1 815 aa14.1□□□□□ -0.15
AMBRA1-211ENST00000533727 PLEKHO1Q53GL0 409 aaPredicted RBP14.1□□□□□ -0.15
AMBRA1-211ENST00000533727 RAPGEF6Q8TEU7 1601 aa14.09□□□□□ -0.15
AMBRA1-211ENST00000533727 SLC4A10Q6U841 1118 aa14.09□□□□□ -0.15
AMBRA1-211ENST00000533727 CCDC146Q8IYE0 955 aa14.09□□□□□ -0.15
AMBRA1-211ENST00000533727 TSHZ2Q9NRE2 1034 aa14.09□□□□□ -0.15
AMBRA1-211ENST00000533727 FRAT2O75474 233 aaPredicted RBP14.09□□□□□ -0.15
AMBRA1-211ENST00000533727 GAS2L2Q8NHY3 880 aa14.09□□□□□ -0.15
AMBRA1-211ENST00000533727 ISY1Q9ULR0 285 aaKnown RBP14.09□□□□□ -0.15
AMBRA1-211ENST00000533727 UGGT2Q9NYU1 1516 aa14.08□□□□□ -0.16
AMBRA1-211ENST00000533727 TATP17735 454 aaPredicted RBP14.08□□□□□ -0.16
AMBRA1-211ENST00000533727 EIF4G3O43432 1585 aaKnown RBP14.08□□□□□ -0.16
AMBRA1-211ENST00000533727 LRRFIP1Q32MZ4 808 aaKnown RBP14.07□□□□□ -0.16
AMBRA1-211ENST00000533727 NAP1L2Q9ULW6 460 aaPredicted RBP14.07□□□□□ -0.16
AMBRA1-211ENST00000533727 ZNF518AQ6AHZ1 1483 aa14.07□□□□□ -0.16
AMBRA1-211ENST00000533727 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.07□□□□□ -0.16
AMBRA1-211ENST00000533727 LRPPRCP42704 1394 aaKnown RBP14.07□□□□□ -0.16
AMBRA1-211ENST00000533727 CDK19Q9BWU1 502 aa14.07□□□□□ -0.16
AMBRA1-211ENST00000533727 GNAI1P63096 354 aa14.07□□□□□ -0.16
AMBRA1-211ENST00000533727 KIF21AQ7Z4S6 1674 aa14.06□□□□□ -0.16
AMBRA1-211ENST00000533727 TNRQ92752 1358 aa14.06□□□□□ -0.16
AMBRA1-211ENST00000533727 RUNDC1Q96C34 613 aa14.06□□□□□ -0.16
AMBRA1-211ENST00000533727 KCNH5Q8NCM2 988 aa14.05□□□□□ -0.16
AMBRA1-211ENST00000533727 PRDM11Q9NQV5 511 aa14.05□□□□□ -0.16
AMBRA1-211ENST00000533727 PTPN23Q9H3S7 1636 aa14.05□□□□□ -0.16
AMBRA1-211ENST00000533727 GGNBP2Q9H3C7 697 aa14.05□□□□□ -0.16
AMBRA1-211ENST00000533727 CNTLNQ9NXG0 1405 aa14.05□□□□□ -0.16
AMBRA1-211ENST00000533727 API5Q9BZZ5 524 aaKnown RBP14.04□□□□□ -0.16
AMBRA1-211ENST00000533727 NUP160Q12769 1436 aa14.04□□□□□ -0.16
AMBRA1-211ENST00000533727 ATP10BO94823 1461 aa14.04□□□□□ -0.16
AMBRA1-211ENST00000533727 PRKRIP1Q9H875 184 aaPredicted RBP14.04□□□□□ -0.16
AMBRA1-211ENST00000533727 ABCC5O15440 1437 aa14.04□□□□□ -0.16
AMBRA1-211ENST00000533727 HSP90AB1P08238 724 aaKnown RBP14.03□□□□□ -0.16
AMBRA1-211ENST00000533727 PIP4K2BP78356 416 aa14.03□□□□□ -0.16
AMBRA1-211ENST00000533727 CCDC7Q96M83 1385 aa14.03□□□□□ -0.16
AMBRA1-211ENST00000533727 RIPK4P57078 832 aa14.03□□□□□ -0.16
AMBRA1-211ENST00000533727 ABCC2Q92887 1545 aa14.03□□□□□ -0.16
AMBRA1-211ENST00000533727 CCDC61Q9Y6R9 512 aa14.02□□□□□ -0.16
AMBRA1-211ENST00000533727 NUTM2GQ5VZR2 741 aa14.02□□□□□ -0.16
AMBRA1-211ENST00000533727 NOL10Q9BSC4 688 aaKnown RBP14.02□□□□□ -0.16
AMBRA1-211ENST00000533727 SPG7Q9UQ90 795 aa14.02□□□□□ -0.16
AMBRA1-211ENST00000533727 FAM135AQ9P2D6 1515 aa14.02□□□□□ -0.17
AMBRA1-211ENST00000533727 NUTM2BA6NNL0 878 aaPredicted RBP14.02□□□□□ -0.17
AMBRA1-211ENST00000533727 NUTM2EB1AL46 878 aaPredicted RBP14.02□□□□□ -0.17
AMBRA1-211ENST00000533727 MSNP26038 577 aaKnown RBP14.02□□□□□ -0.17
AMBRA1-211ENST00000533727 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.17
AMBRA1-211ENST00000533727 WWC1Q8IX03 1113 aa14.02□□□□□ -0.17
AMBRA1-211ENST00000533727 ABCC10Q5T3U5 1492 aa14.02□□□□□ -0.17
AMBRA1-211ENST00000533727 APBB1O00213 710 aa14.01□□□□□ -0.17
AMBRA1-211ENST00000533727 TOM1L2Q6ZVM7 507 aa14.01□□□□□ -0.17
AMBRA1-211ENST00000533727 STRN4Q9NRL3 753 aa14.01□□□□□ -0.17
AMBRA1-211ENST00000533727 PNISRQ8TF01 805 aaKnown RBP14.01□□□□□ -0.17
AMBRA1-211ENST00000533727 C9orf78Q9NZ63 289 aaPredicted RBP14.01□□□□□ -0.17
AMBRA1-211ENST00000533727 KIAA0556O60303 1618 aa14.01□□□□□ -0.17
AMBRA1-211ENST00000533727 ZKSCAN2Q63HK3 967 aa14.01□□□□□ -0.17
AMBRA1-211ENST00000533727 TSPYL4Q9UJ04 414 aa14.01□□□□□ -0.17
AMBRA1-211ENST00000533727 CADPS2Q86UW7 1296 aa14□□□□□ -0.17
AMBRA1-211ENST00000533727 RRP7AQ9Y3A4 280 aaKnown RBP14□□□□□ -0.17
AMBRA1-211ENST00000533727 NAIPQ13075 1403 aa14□□□□□ -0.17
AMBRA1-211ENST00000533727 A2MP01023 1474 aa14□□□□□ -0.17
AMBRA1-211ENST00000533727 EIF2S2P20042 333 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms