RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 KIF1BO60333 1816 aa17.33■□□□□ 0.36
TGFBR3-211ENST00000533370 MROH2AA6NES4 1674 aa17.32■□□□□ 0.36
TGFBR3-211ENST00000533370 ADGRB3O60242 1522 aa17.31■□□□□ 0.36
TGFBR3-211ENST00000533370 TNRQ92752 1358 aa17.31■□□□□ 0.36
TGFBR3-211ENST00000533370 VGFO15240 615 aaPredicted RBP17.31■□□□□ 0.36
TGFBR3-211ENST00000533370 STAG3Q9UJ98 1225 aa17.31■□□□□ 0.36
TGFBR3-211ENST00000533370 RALGAPBQ86X10 1494 aa17.31■□□□□ 0.36
TGFBR3-211ENST00000533370 HSPA5P11021 654 aaKnown RBP17.3■□□□□ 0.36
TGFBR3-211ENST00000533370 CARD11Q9BXL7 1154 aa17.3■□□□□ 0.36
TGFBR3-211ENST00000533370 CEBPAP49715 358 aaPredicted RBP17.29■□□□□ 0.36
TGFBR3-211ENST00000533370 MYOM2P54296 1465 aa17.28■□□□□ 0.36
TGFBR3-211ENST00000533370 ROCK2O75116 1388 aaKnown RBP17.28■□□□□ 0.36
TGFBR3-211ENST00000533370 ADGRF5Q8IZF2 1346 aa17.27■□□□□ 0.36
TGFBR3-211ENST00000533370 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
TGFBR3-211ENST00000533370 NBPF1Q3BBV0 1214 aa17.26■□□□□ 0.35
TGFBR3-211ENST00000533370 GPRASP1Q5JY77 1395 aa17.26■□□□□ 0.35
TGFBR3-211ENST00000533370 ZFYVE9O95405 1425 aa17.25■□□□□ 0.35
TGFBR3-211ENST00000533370 HDGFP51858 240 aaKnown RBP17.25■□□□□ 0.35
TGFBR3-211ENST00000533370 HIRIP3Q9BW71 556 aaPredicted RBP17.25■□□□□ 0.35
TGFBR3-211ENST00000533370 TMEM131LA2VDJ0 1609 aa17.25■□□□□ 0.35
TGFBR3-211ENST00000533370 NRXN1Q9ULB1 1477 aa17.24■□□□□ 0.35
TGFBR3-211ENST00000533370 FER1L4A9Z1Z3 1794 aa17.23■□□□□ 0.35
TGFBR3-211ENST00000533370 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.23■□□□□ 0.35
TGFBR3-211ENST00000533370 C14orf93Q9H972 538 aaKnown RBP17.23■□□□□ 0.35
TGFBR3-211ENST00000533370 A2ML1A8K2U0 1454 aa17.23■□□□□ 0.35
TGFBR3-211ENST00000533370 NLRP1Q9C000 1473 aa17.23■□□□□ 0.35
TGFBR3-211ENST00000533370 USP47Q96K76 1375 aa17.22■□□□□ 0.35
TGFBR3-211ENST00000533370 ADAMTSL3P82987 1691 aa17.21■□□□□ 0.35
TGFBR3-211ENST00000533370 CFAP70Q5T0N1 1121 aa17.21■□□□□ 0.35
TGFBR3-211ENST00000533370 DIEXFQ68CQ4 756 aaKnown RBP17.21■□□□□ 0.35
TGFBR3-211ENST00000533370 TRPM1Q7Z4N2 1603 aa17.21■□□□□ 0.35
TGFBR3-211ENST00000533370 MADDQ8WXG6 1647 aa17.21■□□□□ 0.35
TGFBR3-211ENST00000533370 NEXMIFQ5QGS0 1516 aa17.2■□□□□ 0.34
TGFBR3-211ENST00000533370 C3P01024 1663 aa17.2■□□□□ 0.34
TGFBR3-211ENST00000533370 IFT172Q9UG01 1749 aa17.19■□□□□ 0.34
TGFBR3-211ENST00000533370 DCAF8L1A6NGE4 600 aa17.19■□□□□ 0.34
TGFBR3-211ENST00000533370 NUTM2DQ5VT03 806 aaPredicted RBP17.18■□□□□ 0.34
TGFBR3-211ENST00000533370 THEMISQ8N1K5 641 aaPredicted RBP17.18■□□□□ 0.34
TGFBR3-211ENST00000533370 PIK3C2GO75747 1445 aa17.18■□□□□ 0.34
TGFBR3-211ENST00000533370 PPLO60437 1756 aa17.17■□□□□ 0.34
TGFBR3-211ENST00000533370 ST20-MTHFSA0A0A6YYL1 179 aa17.17■□□□□ 0.34
TGFBR3-211ENST00000533370 RIMS2Q9UQ26 1411 aa17.17■□□□□ 0.34
TGFBR3-211ENST00000533370 LAMC1P11047 1609 aa17.16■□□□□ 0.34
TGFBR3-211ENST00000533370 KIAA1210Q9ULL0 1709 aa17.16■□□□□ 0.34
TGFBR3-211ENST00000533370 KDM5AP29375 1690 aaKnown RBP17.15■□□□□ 0.34
TGFBR3-211ENST00000533370 TMEM2Q9UHN6 1383 aa17.15■□□□□ 0.34
TGFBR3-211ENST00000533370 RIMS1Q86UR5 1692 aaKnown RBP17.13■□□□□ 0.33
TGFBR3-211ENST00000533370 SCAF11Q99590 1463 aaKnown RBP17.12■□□□□ 0.33
TGFBR3-211ENST00000533370 SLC24A1O60721 1099 aa17.12■□□□□ 0.33
TGFBR3-211ENST00000533370 EID1Q9Y6B2 187 aa17.12■□□□□ 0.33
TGFBR3-211ENST00000533370 C11orf95C9JLR9 678 aaPredicted RBP17.11■□□□□ 0.33
TGFBR3-211ENST00000533370 WASHC2AQ641Q2 1341 aa17.11■□□□□ 0.33
TGFBR3-211ENST00000533370 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
TGFBR3-211ENST00000533370 MYO5BQ9ULV0 1848 aa17.1■□□□□ 0.33
TGFBR3-211ENST00000533370 DDX10Q13206 875 aaKnown RBP17.1■□□□□ 0.33
TGFBR3-211ENST00000533370 TXNDC2Q86VQ3 553 aa17.1■□□□□ 0.33
TGFBR3-211ENST00000533370 EIF3AQ14152 1382 aaKnown RBP17.1■□□□□ 0.33
TGFBR3-211ENST00000533370 PTPRMP28827 1452 aa17.1■□□□□ 0.33
TGFBR3-211ENST00000533370 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
TGFBR3-211ENST00000533370 UBR1Q8IWV7 1749 aa17.09■□□□□ 0.33
TGFBR3-211ENST00000533370 CCDC7Q96M83 1385 aa17.08■□□□□ 0.32
TGFBR3-211ENST00000533370 TESK2Q96S53 571 aa17.08■□□□□ 0.32
TGFBR3-211ENST00000533370 LTKP29376 864 aa17.07■□□□□ 0.32
TGFBR3-211ENST00000533370 KIF7Q2M1P5 1343 aa17.06■□□□□ 0.32
TGFBR3-211ENST00000533370 TMF1P82094 1093 aa17.06■□□□□ 0.32
TGFBR3-211ENST00000533370 SLIT1O75093 1534 aa17.06■□□□□ 0.32
TGFBR3-211ENST00000533370 ARHGAP23Q9P227 1491 aa17.05■□□□□ 0.32
TGFBR3-211ENST00000533370 BCANQ96GW7 911 aa17.05■□□□□ 0.32
TGFBR3-211ENST00000533370 TRAK1Q9UPV9 953 aa17.05■□□□□ 0.32
TGFBR3-211ENST00000533370 ADGRB1O14514 1584 aa17.05■□□□□ 0.32
TGFBR3-211ENST00000533370 PLEKHG1Q9ULL1 1385 aa17.04■□□□□ 0.32
TGFBR3-211ENST00000533370 SETD1BQ9UPS6 1966 aaKnown RBP17.04■□□□□ 0.32
TGFBR3-211ENST00000533370 MYO3AQ8NEV4 1616 aa17.03■□□□□ 0.32
TGFBR3-211ENST00000533370 ALKQ9UM73 1620 aa17.03■□□□□ 0.32
TGFBR3-211ENST00000533370 CDCA8Q53HL2 280 aa17.03■□□□□ 0.32
TGFBR3-211ENST00000533370 CENPJQ9HC77 1338 aaPredicted RBP17.02■□□□□ 0.32
TGFBR3-211ENST00000533370 IQGAP1P46940 1657 aa17.02■□□□□ 0.32
TGFBR3-211ENST00000533370 ANKLE2Q86XL3 938 aa17.02■□□□□ 0.32
TGFBR3-211ENST00000533370 CEP170BQ9Y4F5 1589 aaPredicted RBP17.02■□□□□ 0.31
TGFBR3-211ENST00000533370 KDM4FA0A1W2PPD8 638 aa17.01■□□□□ 0.31
TGFBR3-211ENST00000533370 STK26Q9P289 416 aa17.01■□□□□ 0.31
TGFBR3-211ENST00000533370 SIRT1Q96EB6 747 aa17■□□□□ 0.31
TGFBR3-211ENST00000533370 TBX22Q9Y458 520 aa17■□□□□ 0.31
TGFBR3-211ENST00000533370 YTHDC2Q9H6S0 1430 aaKnown RBP16.99■□□□□ 0.31
TGFBR3-211ENST00000533370 LRPPRCP42704 1394 aaKnown RBP16.99■□□□□ 0.31
TGFBR3-211ENST00000533370 ABCC11Q96J66 1382 aa16.98■□□□□ 0.31
TGFBR3-211ENST00000533370 SBNO2Q9Y2G9 1366 aa16.98■□□□□ 0.31
TGFBR3-211ENST00000533370 POLR3GLQ9BT43 218 aa16.97■□□□□ 0.31
TGFBR3-211ENST00000533370 MIER1Q8N108 512 aa16.96■□□□□ 0.31
TGFBR3-211ENST00000533370 METP08581 1390 aa16.96■□□□□ 0.31
TGFBR3-211ENST00000533370 DISP3Q9P2K9 1392 aa16.96■□□□□ 0.31
TGFBR3-211ENST00000533370 ADAMTS13Q76LX8 1427 aa16.96■□□□□ 0.3
TGFBR3-211ENST00000533370 ZNF142P52746 1687 aaPredicted RBP16.95■□□□□ 0.3
TGFBR3-211ENST00000533370 MED14O60244 1454 aa16.95■□□□□ 0.3
TGFBR3-211ENST00000533370 PUS7Q96PZ0 661 aaKnown RBP16.95■□□□□ 0.3
TGFBR3-211ENST00000533370 POGKQ9P215 609 aa16.95■□□□□ 0.3
TGFBR3-211ENST00000533370 ASXL1Q8IXJ9 1541 aa16.95■□□□□ 0.3
TGFBR3-211ENST00000533370 PRAM1Q96QH2 718 aa16.94■□□□□ 0.3
TGFBR3-211ENST00000533370 SLC26A8Q96RN1 970 aa16.94■□□□□ 0.3
TGFBR3-211ENST00000533370 NRXN3Q9Y4C0 1643 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms