RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 UQCRHLA0A096LP55 91 aa8.61□□□□□ -1.03
TGFBR3-210ENST00000533089 G3V3G9 751 aa8.61□□□□□ -1.03
TGFBR3-210ENST00000533089 UQCRHP07919 91 aa8.61□□□□□ -1.03
TGFBR3-210ENST00000533089 CALD1Q05682 793 aaKnown RBP8.61□□□□□ -1.03
TGFBR3-210ENST00000533089 DCAF8Q5TAQ9 597 aa8.61□□□□□ -1.03
TGFBR3-210ENST00000533089 MPHOSPH9Q99550 1183 aa8.61□□□□□ -1.03
TGFBR3-210ENST00000533089 SIN3AQ96ST3 1273 aa8.61□□□□□ -1.03
TGFBR3-210ENST00000533089 TSPYL1Q9H0U9 437 aa8.61□□□□□ -1.03
TGFBR3-210ENST00000533089 HDGFL2Q7Z4V5 671 aaPredicted RBP8.61□□□□□ -1.03
TGFBR3-210ENST00000533089 HECW1Q76N89 1606 aa8.6□□□□□ -1.03
TGFBR3-210ENST00000533089 ARAP1Q96P48 1450 aa8.6□□□□□ -1.03
TGFBR3-210ENST00000533089 FGD6Q6ZV73 1430 aa8.6□□□□□ -1.03
TGFBR3-210ENST00000533089 MCCP23508 829 aa8.6□□□□□ -1.03
TGFBR3-210ENST00000533089 CBX1P83916 185 aa8.6□□□□□ -1.03
TGFBR3-210ENST00000533089 ZNF592Q92610 1267 aa8.6□□□□□ -1.03
TGFBR3-210ENST00000533089 NCOA2Q15596 1464 aa8.6□□□□□ -1.03
TGFBR3-210ENST00000533089 HMGB1P09429 215 aaKnown RBP8.6□□□□□ -1.03
TGFBR3-210ENST00000533089 LRRC9Q6ZRR7 1453 aa8.6□□□□□ -1.03
TGFBR3-210ENST00000533089 FAM193AP78312 1265 aa8.6□□□□□ -1.03
TGFBR3-210ENST00000533089 CHMP3Q9Y3E7 222 aa8.59□□□□□ -1.03
TGFBR3-210ENST00000533089 RAB3GAP2Q9H2M9 1393 aa8.59□□□□□ -1.03
TGFBR3-210ENST00000533089 TRERF1Q96PN7 1200 aa8.59□□□□□ -1.03
TGFBR3-210ENST00000533089 ARHGAP5Q13017 1502 aa8.59□□□□□ -1.03
TGFBR3-210ENST00000533089 PRDM2Q13029 1718 aa8.59□□□□□ -1.03
TGFBR3-210ENST00000533089 SYAP1Q96A49 352 aaPredicted RBP8.59□□□□□ -1.04
TGFBR3-210ENST00000533089 DNAJC2Q99543 621 aaKnown RBP8.59□□□□□ -1.04
TGFBR3-210ENST00000533089 AAMPQ13685 434 aa8.58□□□□□ -1.04
TGFBR3-210ENST00000533089 EHBP1L1Q8N3D4 1523 aa8.58□□□□□ -1.04
TGFBR3-210ENST00000533089 PLCD4Q9BRC7 762 aa8.58□□□□□ -1.04
TGFBR3-210ENST00000533089 PDE4AP27815 886 aa8.58□□□□□ -1.04
TGFBR3-210ENST00000533089 GTF2A1P52655 376 aaPredicted RBP8.58□□□□□ -1.04
TGFBR3-210ENST00000533089 IPO4Q8TEX9 1081 aaKnown RBP8.58□□□□□ -1.04
TGFBR3-210ENST00000533089 GORABQ5T7V8 394 aa8.57□□□□□ -1.04
TGFBR3-210ENST00000533089 H0YHG0 523 aa8.57□□□□□ -1.04
TGFBR3-210ENST00000533089 MRE11P49959 708 aa8.57□□□□□ -1.04
TGFBR3-210ENST00000533089 FOXD1Q16676 465 aa8.57□□□□□ -1.04
TGFBR3-210ENST00000533089 KIF15Q9NS87 1388 aa8.57□□□□□ -1.04
TGFBR3-210ENST00000533089 MIA2Q96PC5 1412 aa8.56□□□□□ -1.04
TGFBR3-210ENST00000533089 CLGNO14967 610 aa8.56□□□□□ -1.04
TGFBR3-210ENST00000533089 GIMAP7Q8NHV1 300 aa8.56□□□□□ -1.04
TGFBR3-210ENST00000533089 CNKSR2Q8WXI2 1034 aa8.55□□□□□ -1.04
TGFBR3-210ENST00000533089 SSR1P43307 286 aaKnown RBP8.55□□□□□ -1.04
TGFBR3-210ENST00000533089 PHF23Q9BUL5 403 aaPredicted RBP8.55□□□□□ -1.04
TGFBR3-210ENST00000533089 FOXD4L1Q9NU39 408 aa8.55□□□□□ -1.04
TGFBR3-210ENST00000533089 POGZQ7Z3K3 1410 aa8.55□□□□□ -1.04
TGFBR3-210ENST00000533089 LMOD3Q0VAK6 560 aa8.55□□□□□ -1.04
TGFBR3-210ENST00000533089 CREBRFQ8IUR6 639 aa8.55□□□□□ -1.04
TGFBR3-210ENST00000533089 NUTM2DQ5VT03 806 aaPredicted RBP8.54□□□□□ -1.04
TGFBR3-210ENST00000533089 CCAR2Q8N163 923 aaKnown RBP8.54□□□□□ -1.04
TGFBR3-210ENST00000533089 EIF3AQ14152 1382 aaKnown RBP8.54□□□□□ -1.04
TGFBR3-210ENST00000533089 PLB1Q6P1J6 1458 aa8.54□□□□□ -1.04
TGFBR3-210ENST00000533089 AXDND1Q5T1B0 1012 aaPredicted RBP8.54□□□□□ -1.04
TGFBR3-210ENST00000533089 CCDC144AA2RUR9 1427 aa8.54□□□□□ -1.04
TGFBR3-210ENST00000533089 EPRSP07814 1512 aaKnown RBP8.54□□□□□ -1.04
TGFBR3-210ENST00000533089 SKOR2Q2VWA4 1001 aaPredicted RBP8.54□□□□□ -1.04
TGFBR3-210ENST00000533089 DDX49Q9Y6V7 483 aaKnown RBP8.54□□□□□ -1.04
TGFBR3-210ENST00000533089 PHLDB1Q86UU1 1377 aa8.54□□□□□ -1.04
TGFBR3-210ENST00000533089 CFAP44Q96MT7 982 aa8.54□□□□□ -1.04
TGFBR3-210ENST00000533089 AFAP1Q8N556 730 aa8.53□□□□□ -1.04
TGFBR3-210ENST00000533089 DIAPH3Q9NSV4 1193 aa8.53□□□□□ -1.04
TGFBR3-210ENST00000533089 WDR97A6NE52 1622 aa8.53□□□□□ -1.04
TGFBR3-210ENST00000533089 U2AF1L5P0DN76 240 aaPredicted RBP8.53□□□□□ -1.04
TGFBR3-210ENST00000533089 U2AF1Q01081 240 aaKnown RBP eCLIP8.53□□□□□ -1.04
TGFBR3-210ENST00000533089 CCER2I3L3R5 266 aa8.53□□□□□ -1.04
TGFBR3-210ENST00000533089 GTF2E1P29083 439 aaPredicted RBP8.53□□□□□ -1.04
TGFBR3-210ENST00000533089 LEKR1Q6ZMV7 388 aa8.53□□□□□ -1.04
TGFBR3-210ENST00000533089 CD109Q6YHK3 1445 aa8.53□□□□□ -1.04
TGFBR3-210ENST00000533089 ZNF644Q9H582 1327 aaPredicted RBP8.53□□□□□ -1.04
TGFBR3-210ENST00000533089 VPS53Q5VIR6 699 aa8.53□□□□□ -1.04
TGFBR3-210ENST00000533089 LTV1Q96GA3 475 aaPredicted RBP8.53□□□□□ -1.04
TGFBR3-210ENST00000533089 CALCOCO1Q9P1Z2 691 aa8.53□□□□□ -1.04
TGFBR3-210ENST00000533089 NUTM2FA1L443 756 aa8.52□□□□□ -1.04
TGFBR3-210ENST00000533089 ANKRD50Q9ULJ7 1429 aa8.52□□□□□ -1.04
TGFBR3-210ENST00000533089 ADAMTS12P58397 1594 aa8.52□□□□□ -1.04
TGFBR3-210ENST00000533089 VGFO15240 615 aaPredicted RBP8.52□□□□□ -1.05
TGFBR3-210ENST00000533089 FRAT2O75474 233 aaPredicted RBP8.52□□□□□ -1.05
TGFBR3-210ENST00000533089 NGDNQ8NEJ9 315 aaKnown RBP8.52□□□□□ -1.05
TGFBR3-210ENST00000533089 KIF3AQ9Y496 699 aa8.52□□□□□ -1.05
TGFBR3-210ENST00000533089 SCAPERQ9BY12 1400 aa8.52□□□□□ -1.05
TGFBR3-210ENST00000533089 TDO2P48775 406 aa8.52□□□□□ -1.05
TGFBR3-210ENST00000533089 ESPNB1AK53 854 aa8.52□□□□□ -1.05
TGFBR3-210ENST00000533089 ITPRIPQ8IWB1 547 aa8.52□□□□□ -1.05
TGFBR3-210ENST00000533089 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.52□□□□□ -1.05
TGFBR3-210ENST00000533089 KIF21AQ7Z4S6 1674 aa8.51□□□□□ -1.05
TGFBR3-210ENST00000533089 IPO8O15397 1037 aaKnown RBP8.51□□□□□ -1.05
TGFBR3-210ENST00000533089 NASPP49321 788 aaPredicted RBP8.51□□□□□ -1.05
TGFBR3-210ENST00000533089 STAC3Q96MF2 364 aa8.51□□□□□ -1.05
TGFBR3-210ENST00000533089 STK31Q9BXU1 1019 aa8.51□□□□□ -1.05
TGFBR3-210ENST00000533089 ARGLU1Q9NWB6 273 aaPredicted RBP8.51□□□□□ -1.05
TGFBR3-210ENST00000533089 CCDC39Q9UFE4 941 aa8.51□□□□□ -1.05
TGFBR3-210ENST00000533089 EIF4G3O43432 1585 aaKnown RBP8.51□□□□□ -1.05
TGFBR3-210ENST00000533089 PHF14O94880 888 aa8.5□□□□□ -1.05
TGFBR3-210ENST00000533089 USP8P40818 1118 aa8.5□□□□□ -1.05
TGFBR3-210ENST00000533089 CNPY4Q8N129 248 aa8.5□□□□□ -1.05
TGFBR3-210ENST00000533089 NUP160Q12769 1436 aa8.5□□□□□ -1.05
TGFBR3-210ENST00000533089 HMGN5P82970 282 aaKnown RBP8.5□□□□□ -1.05
TGFBR3-210ENST00000533089 TIGD1Q96MW7 591 aa8.5□□□□□ -1.05
TGFBR3-210ENST00000533089 HDAC5Q9UQL6 1122 aa8.5□□□□□ -1.05
TGFBR3-210ENST00000533089 LETM1O95202 739 aaPredicted RBP8.5□□□□□ -1.05
TGFBR3-210ENST00000533089 RASSF8Q8NHQ8 419 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms