RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 NBPF1Q3BBV0 1214 aa28.79■■■□□ 2.2
GSDMD-212ENST00000533063 GPRASP1Q5JY77 1395 aa28.78■■■□□ 2.2
GSDMD-212ENST00000533063 KIAA1210Q9ULL0 1709 aa28.78■■■□□ 2.2
GSDMD-212ENST00000533063 ROCK2O75116 1388 aaKnown RBP28.77■■■□□ 2.2
GSDMD-212ENST00000533063 HSPA5P11021 654 aaKnown RBP28.77■■■□□ 2.2
GSDMD-212ENST00000533063 KDM5AP29375 1690 aaKnown RBP28.76■■■□□ 2.2
GSDMD-212ENST00000533063 LAMC1P11047 1609 aa28.76■■■□□ 2.19
GSDMD-212ENST00000533063 EIF4G2P78344 907 aaKnown RBP eCLIP28.76■■■□□ 2.19
GSDMD-212ENST00000533063 UBR1Q8IWV7 1749 aa28.75■■■□□ 2.19
GSDMD-212ENST00000533063 PIK3C2GO75747 1445 aa28.74■■■□□ 2.19
GSDMD-212ENST00000533063 CARD11Q9BXL7 1154 aa28.73■■■□□ 2.19
GSDMD-212ENST00000533063 USP47Q96K76 1375 aa28.72■■■□□ 2.19
GSDMD-212ENST00000533063 ZFYVE9O95405 1425 aa28.72■■■□□ 2.19
GSDMD-212ENST00000533063 NLRP1Q9C000 1473 aa28.72■■■□□ 2.19
GSDMD-212ENST00000533063 NUTM2DQ5VT03 806 aaPredicted RBP28.7■■■□□ 2.18
GSDMD-212ENST00000533063 PLPPR3Q6T4P5 718 aa28.69■■■□□ 2.18
GSDMD-212ENST00000533063 STAG3Q9UJ98 1225 aa28.69■■■□□ 2.18
GSDMD-212ENST00000533063 MYO3AQ8NEV4 1616 aa28.68■■■□□ 2.18
GSDMD-212ENST00000533063 CFAP70Q5T0N1 1121 aa28.66■■■□□ 2.18
GSDMD-212ENST00000533063 IQGAP1P46940 1657 aa28.66■■■□□ 2.18
GSDMD-212ENST00000533063 VGFO15240 615 aaPredicted RBP28.66■■■□□ 2.18
GSDMD-212ENST00000533063 RIMS2Q9UQ26 1411 aa28.64■■■□□ 2.17
GSDMD-212ENST00000533063 SETBP1Q9Y6X0 1596 aa28.62■■■□□ 2.17
GSDMD-212ENST00000533063 C14orf93Q9H972 538 aaKnown RBP28.62■■■□□ 2.17
GSDMD-212ENST00000533063 PTPRMP28827 1452 aa28.6■■■□□ 2.17
GSDMD-212ENST00000533063 ADGRB1O14514 1584 aa28.6■■■□□ 2.17
GSDMD-212ENST00000533063 SETD1BQ9UPS6 1966 aaKnown RBP28.59■■■□□ 2.17
GSDMD-212ENST00000533063 POLR1AO95602 1720 aaPredicted RBP28.58■■■□□ 2.17
GSDMD-212ENST00000533063 TMEM2Q9UHN6 1383 aa28.58■■■□□ 2.16
GSDMD-212ENST00000533063 C11orf95C9JLR9 678 aaPredicted RBP28.57■■■□□ 2.16
GSDMD-212ENST00000533063 ST20-MTHFSA0A0A6YYL1 179 aa28.57■■■□□ 2.16
GSDMD-212ENST00000533063 DIEXFQ68CQ4 756 aaKnown RBP28.57■■■□□ 2.16
GSDMD-212ENST00000533063 CEP170BQ9Y4F5 1589 aaPredicted RBP28.57■■■□□ 2.16
GSDMD-212ENST00000533063 SCAF11Q99590 1463 aaKnown RBP28.55■■■□□ 2.16
GSDMD-212ENST00000533063 NRXN3Q9Y4C0 1643 aa28.55■■■□□ 2.16
GSDMD-212ENST00000533063 ZNF142P52746 1687 aaPredicted RBP28.55■■■□□ 2.16
GSDMD-212ENST00000533063 ASXL1Q8IXJ9 1541 aa28.54■■■□□ 2.16
GSDMD-212ENST00000533063 WASHC2AQ641Q2 1341 aa28.54■■■□□ 2.16
GSDMD-212ENST00000533063 SETD1AO15047 1707 aaKnown RBP28.53■■■□□ 2.16
GSDMD-212ENST00000533063 SLIT1O75093 1534 aa28.53■■■□□ 2.16
GSDMD-212ENST00000533063 ARHGAP23Q9P227 1491 aa28.52■■■□□ 2.16
GSDMD-212ENST00000533063 ALKQ9UM73 1620 aa28.52■■■□□ 2.16
GSDMD-212ENST00000533063 SENP3Q9H4L4 574 aaPredicted RBP28.5■■■□□ 2.15
GSDMD-212ENST00000533063 TMEM132EQ6IEE7 984 aa28.49■■■□□ 2.15
GSDMD-212ENST00000533063 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.49■■■□□ 2.15
GSDMD-212ENST00000533063 LTKP29376 864 aa28.47■■■□□ 2.15
GSDMD-212ENST00000533063 CCDC7Q96M83 1385 aa28.47■■■□□ 2.15
GSDMD-212ENST00000533063 TESK2Q96S53 571 aa28.46■■■□□ 2.15
GSDMD-212ENST00000533063 KIF7Q2M1P5 1343 aa28.44■■■□□ 2.14
GSDMD-212ENST00000533063 THEMISQ8N1K5 641 aaPredicted RBP28.44■■■□□ 2.14
GSDMD-212ENST00000533063 KDM4FA0A1W2PPD8 638 aa28.43■■■□□ 2.14
GSDMD-212ENST00000533063 HDGFP51858 240 aaKnown RBP28.43■■■□□ 2.14
GSDMD-212ENST00000533063 DDX10Q13206 875 aaKnown RBP28.43■■■□□ 2.14
GSDMD-212ENST00000533063 ARHGEF28Q8N1W1 1705 aaKnown RBP28.42■■■□□ 2.14
GSDMD-212ENST00000533063 EIF3AQ14152 1382 aaKnown RBP28.39■■■□□ 2.14
GSDMD-212ENST00000533063 PLEKHG1Q9ULL1 1385 aa28.39■■■□□ 2.13
GSDMD-212ENST00000533063 TXNDC2Q86VQ3 553 aa28.39■■■□□ 2.13
GSDMD-212ENST00000533063 ADAMTS13Q76LX8 1427 aa28.37■■■□□ 2.13
GSDMD-212ENST00000533063 TRAK1Q9UPV9 953 aa28.37■■■□□ 2.13
GSDMD-212ENST00000533063 DISP3Q9P2K9 1392 aa28.36■■■□□ 2.13
GSDMD-212ENST00000533063 YTHDC2Q9H6S0 1430 aaKnown RBP28.35■■■□□ 2.13
GSDMD-212ENST00000533063 EID1Q9Y6B2 187 aa28.34■■■□□ 2.13
GSDMD-212ENST00000533063 MED14O60244 1454 aa28.34■■■□□ 2.13
GSDMD-212ENST00000533063 QRICH2Q9H0J4 1663 aa28.33■■■□□ 2.13
GSDMD-212ENST00000533063 METP08581 1390 aa28.33■■■□□ 2.13
GSDMD-212ENST00000533063 SBNO2Q9Y2G9 1366 aa28.3■■■□□ 2.12
GSDMD-212ENST00000533063 CENPJQ9HC77 1338 aaPredicted RBP28.29■■■□□ 2.12
GSDMD-212ENST00000533063 STK26Q9P289 416 aa28.28■■■□□ 2.12
GSDMD-212ENST00000533063 LRPPRCP42704 1394 aaKnown RBP28.27■■■□□ 2.12
GSDMD-212ENST00000533063 TMF1P82094 1093 aa28.26■■■□□ 2.11
GSDMD-212ENST00000533063 DLC1Q96QB1 1528 aa28.25■■■□□ 2.11
GSDMD-212ENST00000533063 KNDC1Q76NI1 1749 aa28.25■■■□□ 2.11
GSDMD-212ENST00000533063 BCANQ96GW7 911 aa28.24■■■□□ 2.11
GSDMD-212ENST00000533063 ABCC11Q96J66 1382 aa28.24■■■□□ 2.11
GSDMD-212ENST00000533063 DIP2AQ14689 1571 aa28.23■■■□□ 2.11
GSDMD-212ENST00000533063 SLC26A8Q96RN1 970 aa28.22■■■□□ 2.11
GSDMD-212ENST00000533063 POLR3GLQ9BT43 218 aa28.22■■■□□ 2.11
GSDMD-212ENST00000533063 MIER1Q8N108 512 aa28.22■■■□□ 2.11
GSDMD-212ENST00000533063 ANKLE2Q86XL3 938 aa28.21■■■□□ 2.11
GSDMD-212ENST00000533063 TECPR2O15040 1411 aa28.2■■■□□ 2.11
GSDMD-212ENST00000533063 TBX22Q9Y458 520 aa28.19■■■□□ 2.1
GSDMD-212ENST00000533063 PTPRUQ92729 1446 aa28.19■■■□□ 2.1
GSDMD-212ENST00000533063 CPS1P31327 1500 aa28.18■■■□□ 2.1
GSDMD-212ENST00000533063 PRAM1Q96QH2 718 aa28.18■■■□□ 2.1
GSDMD-212ENST00000533063 MYOM1P52179 1685 aa28.17■■■□□ 2.1
GSDMD-212ENST00000533063 TULP4Q9NRJ4 1543 aa28.17■■■□□ 2.1
GSDMD-212ENST00000533063 PLEKHH1Q9ULM0 1364 aa28.15■■■□□ 2.1
GSDMD-212ENST00000533063 SLC24A1O60721 1099 aa28.15■■■□□ 2.1
GSDMD-212ENST00000533063 SAFB2Q14151 953 aaKnown RBP eCLIP28.14■■■□□ 2.1
GSDMD-212ENST00000533063 WAPLQ7Z5K2 1190 aa28.12■■■□□ 2.09
GSDMD-212ENST00000533063 LMTK3Q96Q04 1460 aa28.12■■■□□ 2.09
GSDMD-212ENST00000533063 FAM135BQ49AJ0 1406 aa28.12■■■□□ 2.09
GSDMD-212ENST00000533063 XRN1Q8IZH2 1706 aaKnown RBP28.11■■■□□ 2.09
GSDMD-212ENST00000533063 ROBO2Q9HCK4 1378 aa28.11■■■□□ 2.09
GSDMD-212ENST00000533063 CDCA8Q53HL2 280 aa28.1■■■□□ 2.09
GSDMD-212ENST00000533063 SIRT1Q96EB6 747 aa28.1■■■□□ 2.09
GSDMD-212ENST00000533063 POGKQ9P215 609 aa28.1■■■□□ 2.09
GSDMD-212ENST00000533063 NPHP4O75161 1426 aaPredicted RBP28.1■■■□□ 2.09
GSDMD-212ENST00000533063 NCKAP5LQ9HCH0 1330 aa28.09■■■□□ 2.09
GSDMD-212ENST00000533063 CHD2O14647 1828 aaKnown RBP28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms